Detection, fate and transport of the biohazardous agent Toxoplasma gondii in soil water systems: Influence of soil physicochemical properties, water chemistry and surfactant.

A series of laboratory experiments were conducted to study the fate and transport of Toxoplasma gondii oocysts in soils as a function of soil physicochemical properties and soil water chemistry properties. Soil columns were homogeneously packed with loamy sand soils (Lewiston and Greenson series) and sandy loam soils (Sparta and Gilford series), and subject to hydrologic conditions characterized by the absence and presence of an anionic surfactant-Aerosol 22 in the artificial rainfall. Quantitative polymerase chain reaction (qPCR) was utilized for the detection and enumeration of oocysts in soil leachates to evaluate their breakthrough and in soil matrices to examine their spatial distribution. Differences in the rate and extent of transport of oocysts were observed as a function of physical and chemical parameters tested. The breakthrough of oocysts was observed for all the soils irrespective of the presence of surfactant. However, in the absence of surfactant, the predominant fate of oocysts in soils subject to simulated rainfall was their retention in the soil profile. The presence of surfactant induced a change in the fate of oocysts in these soils exposed to rainfall simulation as the predominant fate of oocysts was found to be in the soil leachates.

Experimental measurements and numerical simulations of the transport and retention of nanocrystal CdSe/ZnS quantum dots in saturated porous media: Effects of electrolytes, organic ligand, and natural organic matter.

This study explores the transport and retention of CdSe/ZnS quantum dot (QD) nanoparticles in water-saturated sand columns as a function of electrolytes (Na+ and Ca2+), ionic strength, organic ligand citrate, and Suwannee River natural organic matter (SRNOM). Numerical simulations were carried out to understand the mechanisms that govern the transport and interactions of QDs in porous media and to assess how environmental parameters impact these mechanisms. An increase in the ionic strength of NaCl and CaCl2 increased QDs retention in porous media. The reduction of the electrostatic interactions screened by dissolved electrolyte ions and the increase of divalent bridging effect are the causes for this enhanced retention behavior. Citrate or SRNOM enhanced QDs transport in NaCl and CaCl2 systems by either increasing the repulsion energy barrier or inducing the steric interactions between QDs and the quartz sand collectors. A non-exponential decay characterized the retention profiles of QDs along the distance to the inlet. The modeling results indicated the four models containing the attachment, detachment, and straining terms - Model 1: M1-attachment, Model 2: M2-attachment and detachment, Model 3: M3-straining, and Model 4: M4-attachment, detachment, and straining - closely simulated the observed breakthrough curves (BTCs) but inadequately described the retention profiles.

Experimental measurements and numerical simulations of the transport and retention of nanocrystal CdSe/ZnS quantum dots in saturated porous media: effects of pH, organic ligand, and natural organic matter.

The risks of environmental exposures of quantum dot (QD) nanoparticles are increasing, but these risks are difficult to assess because fundamental questions remain about factors affecting the mobility of QDs. The objective of this study is to help address this shortcoming by evaluating the physico-chemical mechanisms controlling the transport and retention of CdSe/ZnS QDs under various environmental conditions. The approach was to run a series of laboratory-scale column experiments where QDs were transported through saturated porous media with different pH values and concentrations of citrate and Suwannee River natural organic matter (SRNOM). Numerical simulations were then conducted and compared with the laboratory data in order to evaluate parameters controlling transport. QD suspensions were injected into the column in an upward direction and ICP-MS used to analyze Cd2+ concentrations (C) in column effluent and sand porous media samples. The increase in the background solution pH values enhanced the QD transport and decreased the QD retention. QD transport recovery percentages obtained from the column effluent samples were 2.6%, 83.2%, 101.7%, 96.5%, and 98.9%, at pH levels of 1.5, 3.5, 5, 7, and 9, respectively. The effects of citrate and SRNOM on the transport and retention of QDs were pH dependent as reflected in the influence of the electrostatic and steric interactions between QDs and sand surfaces. QDs were mobile under unfavorable deposition conditions at environmentally relevant pHs (i.e., 5, 7, and 9). Under favorable pH conditions for deposition (i.e., 1.5), QDs were completely retained within the porous media. The retention profiles of QDs showed a non-exponential decay with distance to the inlet, attributed to multiple deposition rates caused by the QD particles and surface heterogeneities of the quartz silica sand. Results of the diameter ratios of QDs to the median sand grains, in suspensions of DI water at pH 1.5, of citrate at pH 1.5, and of citrate at pH 3.5 indicate straining as the dominating mechanism for QD retention in porous media. The blocking effect and straining were significant under favorable deposition conditions and the detachment effect was non-negligible under unfavorable deposition conditions. Physico-chemical attachment and straining are the governing mechanisms that control the retention of QDs. Overall, experimental results indicate that aggregation, deposition, straining, blocking, and DLVO-type interactions affect the advective transport and retention of QDs in saturated porous media. The simulations were conducted using models that include terms describing attachment, detachment, and straining terms-model 1: M1-attachment, model 2: M2-attachment and detachment, model 3: M3-straining, and model 4: M4-attachment, detachment, and straining. The results from simulations with M2-attachment and detachment and M4-attachment, detachment, and straining matched best the observed breakthrough curves, but all four models inadequately described the retention profiles. Our findings demonstrate that QDs are mobile in porous media under a wide range of physico-chemical conditions representative of the natural environment. The mobility behavior of QDs in porous media indicated the potential risk of soil and groundwater contamination.

Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.

Over the last 60 years, soil microbiologists have accumulated a wealth of experimental data showing that the bulk, macroscopic parameters (e.g., granulometry, pH, soil organic matter, and biomass contents) commonly used to characterize soils provide insufficient information to describe quantitatively the activity of soil microorganisms and some of its outcomes, like the emission of greenhouse gasses. Clearly, new, more appropriate macroscopic parameters are needed, which reflect better the spatial heterogeneity of soils at the microscale (i.e., the pore scale) that is commensurate with the habitat of many microorganisms. For a long time, spectroscopic and microscopic tools were lacking to quantify processes at that scale, but major technological advances over the last 15 years have made suitable equipment available to researchers. In this context, the objective of the present article is to review progress achieved to date in the significant research program that has ensued. This program can be rationalized as a sequence of steps, namely the quantification and modeling of the physical-, (bio)chemical-, and microbiological properties of soils, the integration of these different perspectives into a unified theory, its upscaling to the macroscopic scale, and, eventually, the development of new approaches to measure macroscopic soil characteristics. At this stage, significant progress has been achieved on the physical front, and to a lesser extent on the (bio)chemical one as well, both in terms of experiments and modeling. With regard to the microbial aspects, although a lot of work has been devoted to the modeling of bacterial and fungal activity in soils at the pore scale, the appropriateness of model assumptions cannot be readily assessed because of the scarcity of relevant experimental data. For significant progress to be made, it is crucial to make sure that research on the microbial components of soil systems does not keep lagging behind the work on the physical and (bio)chemical characteristics. Concerning the subsequent steps in the program, very little integration of the various disciplinary perspectives has occurred so far, and, as a result, researchers have not yet been able to tackle the scaling up to the macroscopic level. Many challenges, some of them daunting, remain on the path ahead. Fortunately, a number of these challenges may be resolved by brand new measuring equipment that will become commercially available in the very near future.

Visualization and measurement of multiphase flow in porous media using light transmission and synchrotron x-rays.

Non-aqueous phase liquids enter the vadose zone as a result of spills or leaking underground storage facilities, thus contaminating groundwater resources. Measuring the contaminant concentrations is important in assessing the risk to human health and the environment and to develop effective remediation. This research presents the development and application of the light transmission method (LTM) for three-phase flow systems, aimed at investigating unstable fingered flow in a soil-air-oil-water system. The LTM uses the hue and intensity of light transmitted through a slab chamber to measure fluid content, since total liquid content is a function of both hue and light intensity. Evaluation of the LTM is obtained by comparing experiments with LTM and synchrotron X-rays. The LTM captures the spatial resolution of the fluid contents and can provide new insights into rapidly changing, two-phase and three-phase flow systems. Application of the LTM as a visualization technique for environmental and physical phenomena is noted. Visualization by LTM of groundwater remediation by surfactants as well as visualization of model cluster growth and fractal dimensions was also explored.

Preferential transport of Cryptosporidium parvum oocysts in variably saturated subsurface environments.

When oocysts of the protozoan Cryptosporidium parvum contaminate drinking water supplies, they can cause outbreaks of Cryptosporidiosis, a common waterborne disease. Of the different pathways by which oocysts can wind up in drinking water, one has received little attention to date; that is, because soils are often considered to be perfect filters, the transport of oocysts through the subsoil to groundwater is generally ignored. To evaluate the significance of this pathway, a series of laboratory experiments investigated subsurface transport of oocysts. Experiment 1 was carried out in a vertical 18-cm-long column filled either with glass beads or silica sand, under conditions known to foster fingered flow. Experiment 2 involved undisturbed, macroporous soil columns subjected to macropore flow. Experiment 3 aimed to study the lateral flow on an undisturbed soil block. The columns and soil samples were subjected to artificial rainfall and were allowed to reach steady state. At that point, feces of contaminated calves were applied at the surface along with a known amount of potassium chloride to serve as a tracer, and rainfall was continued at the same rate. The breakthrough of oocysts and chloride, monitored in the effluent, demonstrate the importance of preferential flow on the transport of oocysts. Compared with chloride, peak oocyst concentrations were not appreciably delayed and, in some cases, occurred even before the chloride peak. Recovery rates for oocysts were low, ranging from 0.1 to 10.4% of the oocysts originally applied on the columns. However, the numbers of oocysts present in the effluents were still orders of magnitude higher than 10 oocysts, the infectious dose considered by the U.S. Food and Drug Administration, Center for Food Safety and Applied Nutrition, to be sufficient to cause Cryptosporidiosis in healthy adults. These results suggest that the transport of oocysts in the subsurface via preferential flow may create a significant risk of groundwater contamination in some situations.

Quantification of Cryptosporidium parvum in natural soil matrices and soil solutions using qPCR.

Traditional microscopy methods for the detection and quantification of Cryptosporidium parvum in soil matrices are time-consuming, labor-intensive, and lack sensitivity and specificity. This research focused on developing a qPCR protocol for the sensitive and specific detection and quantification of C. parvum in natural soil matrices and soil-water extracts. The physico-chemical parameters - lysis media, number of thermal shocks and thawing temperatures - controlling DNA extraction efficiency were investigated. Experimental results identified oocyst age as a critical parameter affecting oocyst disruption and quantification. The most efficient oocyst disruption method for C. parvum oocysts regardless of their age was established as 5 thermal shocks with thawing at 65°C in Tris-EDTA (TE) buffer. In addition to the purification columns used to remove PCR inhibitors present in environmental matrices, a combination of 3mM MgCl(2) and 600ng/µl BSA yielded the highest amplicon yield for both young and aged oocysts. Sucrose flotation was determined to be a better oocyst isolation method than two-phase flotation. The optimized parameters for DNA extraction and the qPCR assay resulted in very specific and sensitive detection of C. parvum. Minimum detection limits were 0.667 for young C. parvum oocysts and 6.67 for aged C. parvum oocysts per PCR reaction. The accuracy of the detections and quantifications was 0.999. Protocol performance was tested in contrasting soil samples and soil-water extract samples on the basis of percentage of recovery (PR) values. Depending on the number of oocysts used to inoculate the samples, the average PR values ranged from 7.2 to 43.5%, 29.3-52.5%, and 11.5-60.8% for Trenton, Greenson, and Sparta soil-water extracts, respectively, and 12.1-77% for DI water. PR values ranged from 4.3% to 107.8% for Trenton, Greenson and Sparta soil samples.

Deposition and release kinetics of nano-TiO2 in saturated porous media: effects of solution ionic strength and surfactants.

The aggregation, transport and deposition kinetics (i.e. attachment and release) of TiO(2) nanoparticles (nano-TiO(2)) were investigated as a function of ionic strength and the presence of anionic (sodium dodecylbenzene sulfonate, SDBS) and non-ionic (Triton X-100) surfactants in 100% critical micelle concentration (CMC). The electrolyte concentration of the suspensions dictated the kinetic stability of nano-TiO(2) thus influencing the transport and retention of the nanoaggregates in the saturated porous medium. With increasing ionic strength, the interaction between approaching nano-TiO(2) and nano-TiO(2) already deposited onto collectors surfaces seemed to be more favorable than the interaction between approaching nano-TiO(2) and bare collectors surfaces. The abrupt and gradual reduction in electrolyte concentration during the flushing cycles of the column experiments induced the release of previously deposited nano-TiO(2) suggesting attachment of nano-TiO(2) through secondary energy minimum.

Aggregation and transport of nano-TiO2 in saturated porous media: effects of pH, surfactants and flow velocity.

Transport of manufactured nano-TiO(2) in saturated porous media was investigated as a function of morphology characteristics, pH of solutions, flow velocity, and the presence of anionic and non-ionic surfactants in different concentrations. Surfactants enhanced the transport of nano-TiO(2) in saturated porous media while a pH approaching the point of zero charge of nano-TiO(2) limited their transport. The deposition process, a retention mechanism of nano-TiO(2) in saturated porous media was impacted by surfactant and pH. In Dispersion 1 systems (pH 7), the size of the nano-TiO(2) aggregates was directly related to the presence of surfactants. The presence of non-ionic surfactant (Triton X-100) induced a size reduction of nano-TiO(2) aggregates that was dependent on the critical micelle concentration. In Dispersion 2 systems (pH 9), the stability provided by the pH had a significant effect on the size of nano-TiO(2) aggregates; the addition of surfactants did impact the size of the nano-TiO(2) aggregates but in less significance as compared to Dispersion 1 systems. The electrostatic and steric repulsion forces in connection with the size of nano-TiO(2) aggregates and flow velocity impacted the single-collector efficiency and attachment efficiency which dictated the maximum transport distance of nano-TiO(2) for the Dispersion 1 and Dispersion 2 systems. By doubling the flow velocity at pH 9, the No Surfactant, 50% CMC Triton X-100, 100% CMC Triton X-100 and 100% CMC SDBS dispersion systems allowed nano-TiO(2) to attain maximum transport distances of 0.898, 2.17, 2.29 and 1.12 m, respectively. Secondary energy minima played a critical role in the deposition mechanisms of nano-TiO(2). Nano-TiO(2) deposited in the secondary energy wells may be released because of changes in solution chemistry. The deposition of nano-TiO(2) in primary and secondary energy minima, the reversibility of their deposition should be characterized to analyze the transport of nanoparticles in porous media. This is necessary to assess the risk of nanoparticles to the environment and public health.

Coupled effects of solution chemistry and hydrodynamics on the mobility and transport of quantum dot nanomaterials in the vadose zone.

To investigate the coupled effects of solution chemistry and hydrodynamics on the mobility of quantum dot (QD) nanoparticles in the vadose zone, laboratory scale transport experiments involving single and/or sequential infiltrations of QDs in unsaturated and saturated porous media, and computations of total interaction and capillary potential energies were performed. As ionic strength increased, QD retention in the unsaturated porous media increased; however, this retention was significantly suppressed in the presence of a non-ionic surfactant in the infiltration suspensions as indicated by surfactant enhanced transport of QDs. In the vadose zone, the non-ionic surfactant limited the formation of QD aggregates, enhanced QD mobility and transport, and lowered the solution surface tension, which resulted in a decrease in capillary forces that not only led to a reduction in the removal of QDs, but also impacted the vadose zone flow processes. When chemical transport conditions were favorable (ionic strength of 5 × 10(-4)M and 5 × 10(-3)M, or ionic strengths of 5 × 10(-2)M and 0.5M with surfactant), the dominating phenomena controlling the mobility and transport of QDs in the vadose zone were meso-scale processes, where infiltration by preferential flow results in the rapid transport of QDs. When chemical transport conditions were unfavorable (ionic strength of 5 × 10(-2)M and 0.5M) the dominating phenomena controlling the mobility and transport of QDs in the vadose zone were pore-scale processes governed by gas-water interfaces (GWI) that impact the mobility of QDs. The addition of surfactant enhanced the transport of QDs both in favorable and unfavorable chemical transport conditions. The mobility and retention of QDs was controlled by interaction and capillary forces, with the latter being the most influential. GWI were found to be the dominant mechanism and site for QD removal compared with solid-water interfaces (SWI) and pore straining. Additionally, ripening phenomena were demonstrated to enhance QDs removal or retention in porous media and to be attenuated by the presence of surfactant.