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1.
A Phylogenetic Analysis of Human Immunodeficiency Virus Type 1 Sequences in Kiev: Findings Among Key Populations.
Clin Infect Dis
; 65(7): 1127-1135, 2017 10 01.
Article
in English
| MEDLINE | ID: mdl-28575385
2.
Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters.
J Infect Dis
; 213(9): 1410-8, 2016 May 01.
Article
in English
| MEDLINE | ID: mdl-26704616
3.
The contribution of viral genotype to plasma viral set-point in HIV infection.
PLoS Pathog
; 10(5): e1004112, 2014 May.
Article
in English
| MEDLINE | ID: mdl-24789308
4.
Evidence of Self-Sustaining Drug Resistant HIV-1 Lineages Among Untreated Patients in the United Kingdom.
Clin Infect Dis
; 61(5): 829-36, 2015 Sep 01.
Article
in English
| MEDLINE | ID: mdl-25991470
5.
Integrase inhibitor (INI) genotypic resistance in treatment-naive and raltegravir-experienced patients infected with diverse HIV-1 clades.
J Antimicrob Chemother
; 70(11): 3080-6, 2015 Nov.
Article
in English
| MEDLINE | ID: mdl-26311843
6.
Intercontinental dispersal of HIV-1 subtype B associated with transmission among men who have sex with men in Japan.
J Virol
; 88(17): 9864-76, 2014 Sep 01.
Article
in English
| MEDLINE | ID: mdl-24942575
7.
Automated analysis of phylogenetic clusters.
BMC Bioinformatics
; 14: 317, 2013 Nov 06.
Article
in English
| MEDLINE | ID: mdl-24191891
8.
Transmission network parameters estimated from HIV sequences for a nationwide epidemic.
J Infect Dis
; 204(9): 1463-9, 2011 Nov.
Article
in English
| MEDLINE | ID: mdl-21921202
9.
Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom.
PLoS Pathog
; 5(9): e1000590, 2009 Sep.
Article
in English
| MEDLINE | ID: mdl-19779560
10.
An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1.
PLoS Comput Biol
; 5(11): e1000581, 2009 Nov.
Article
in English
| MEDLINE | ID: mdl-19956739
11.
Effect of HIV-1 subtype on virologic and immunologic response to starting highly active antiretroviral therapy.
Clin Infect Dis
; 48(9): 1296-305, 2009 May 01.
Article
in English
| MEDLINE | ID: mdl-19331585
12.
The Changing Epidemiological Profile of HIV-1 Subtype B Epidemic in Ukraine.
AIDS Res Hum Retroviruses
; 35(2): 155-163, 2019 02.
Article
in English
| MEDLINE | ID: mdl-30430838
13.
Population trends in the prevalence and patterns of protease resistance related to exposure to unboosted and boosted protease inhibitors.
Antivir Ther
; 13(6): 771-7, 2008.
Article
in English
| MEDLINE | ID: mdl-18839778
14.
Identification of accessory mutations associated with high-level resistance in HIV-1 reverse transcriptase.
AIDS
; 21(4): 447-55, 2007 Feb 19.
Article
in English
| MEDLINE | ID: mdl-17301563
15.
A Direct Comparison of Two Densely Sampled HIV Epidemics: The UK and Switzerland.
Sci Rep
; 6: 32251, 2016 09 19.
Article
in English
| MEDLINE | ID: mdl-27642070
16.
A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK.
AIDS
; 29(15): 1917-25, 2015 Sep 24.
Article
in English
| MEDLINE | ID: mdl-26355570
17.
Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of Circulating Recombinant Form (CRF) 50_A1D.
PLoS One
; 9(1): e83337, 2014.
Article
in English
| MEDLINE | ID: mdl-24454702
18.
Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions.
AIDS
; 28(13): 1967-75, 2014 Aug 24.
Article
in English
| MEDLINE | ID: mdl-24991999
19.
Second-line protease inhibitor-based antiretroviral therapy after non-nucleoside reverse transcriptase inhibitor failure: the effect of a nucleoside backbone.
Antivir Ther
; 18(2): 213-9, 2013.
Article
in English
| MEDLINE | ID: mdl-23653911
20.
The impact of HIV-1 reverse transcriptase polymorphisms on responses to first-line nonnucleoside reverse transcriptase inhibitor-based therapy in HIV-1-infected adults.
AIDS
; 27(14): 2245-53, 2013 Sep 10.
Article
in English
| MEDLINE | ID: mdl-24157905