Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 24
Filter
1.
Magn Reson Med ; 73(4): 1632-42, 2015 Apr.
Article in English | MEDLINE | ID: mdl-24753061

ABSTRACT

PURPOSE: T2 mapping provides a quantitative approach for focal liver lesion characterization. For small lesions, a biexponential model should be used to account for partial volume effects (PVE). However, conventional biexponential fitting suffers from large uncertainty of the fitted parameters when noise is present. The purpose of this work is to develop a more robust method to correct for PVE affecting small lesions. METHODS: We developed a region of interest-based joint biexponential fitting (JBF) algorithm to estimate the T2 of lesions affected by PVE. JBF takes advantage of the lesion fraction variation among voxels within a region of interest. JBF is compared to conventional approaches using Cramér-Rao lower bound analysis, numerical simulations, phantom, and in vivo data. RESULTS: JBF provides more accurate and precise T2 estimates in the presence of PVE. Furthermore, JBF is less sensitive to region of interest drawing. Phantom and in vivo results show that JBF can be combined with a reconstruction method for highly undersampled data, enabling the characterization of small abdominal lesions from data acquired in a single breath hold. CONCLUSION: The JBF algorithm provides more accurate and stable T2 estimates for small structures than conventional techniques when PVE is present. It should be particularly useful for the characterization of small abdominal lesions.


Subject(s)
Algorithms , Artifacts , Image Enhancement/methods , Image Interpretation, Computer-Assisted/methods , Imaging, Three-Dimensional/methods , Liver Diseases/pathology , Magnetic Resonance Imaging/methods , Humans , Reproducibility of Results , Sensitivity and Specificity
2.
Appl Opt ; 54(8): C23-44, 2015 Mar 10.
Article in English | MEDLINE | ID: mdl-25968400

ABSTRACT

The promise of compressive sensing, exploitation of compressibility to achieve high quality image reconstructions with less data, has attracted a great deal of attention in the medical imaging community. At the Compressed Sensing Incubator meeting held in April 2014 at OSA Headquarters in Washington, DC, presentations were given summarizing some of the research efforts ongoing in compressive sensing for x-ray computed tomography and magnetic resonance imaging systems. This article provides an expanded version of these presentations. Sparsity-exploiting reconstruction algorithms that have gained popularity in the medical imaging community are studied, and examples of clinical applications that could benefit from compressive sensing ideas are provided. The current and potential future impact of compressive sensing on the medical imaging field is discussed.


Subject(s)
Diagnostic Imaging/instrumentation , Diagnostic Imaging/methods , Algorithms , Congresses as Topic , Data Compression , Humans , Image Processing, Computer-Assisted , Liver Neoplasms/diagnostic imaging , Liver Neoplasms/pathology , Lung Neoplasms/diagnostic imaging , Lung Neoplasms/pathology , Magnetic Resonance Imaging , Patient Safety , Radiographic Image Interpretation, Computer-Assisted , Radiography, Thoracic , Reproducibility of Results , Signal Processing, Computer-Assisted , Tomography, X-Ray Computed
3.
Sci Rep ; 13(1): 10414, 2023 07 20.
Article in English | MEDLINE | ID: mdl-37474571

ABSTRACT

Crowd movements are observed among different species and on different scales, from insects to mammals, as well as in non-cognitive systems, such as motile cells. When forced to escape through a narrow opening, most terrestrial animals behave like granular materials and clogging events decrease the efficiency of the evacuation. Here, we explore the evacuation behavior of macroscopic, aquatic agents, neon fish, and challenge their gregarious behavior by forcing the school through a constricted passage. Using a statistical analysis method developed for granular matter and applied to crowd evacuation, our results clearly show that, unlike crowds of people or herds of sheep, no clogging occurs at the bottleneck. The fish do not collide and wait for a minimum waiting time between two successive exits, while respecting a social distance. When the constriction becomes similar to or smaller than their social distance, the individual domains defined by this cognitive distance are deformed and fish density increases. We show that the current of escaping fish behaves like a set of deformable 2D-bubbles, their 2D domain, passing through a constriction. Schools of fish show that, by respecting social rules, a crowd of individuals can evacuate without clogging, even in an emergency situation.


Subject(s)
Crowding , Movement , Animals , Sheep , Physical Distancing , Mammals
4.
Magn Reson Med ; 67(5): 1355-66, 2012 May.
Article in English | MEDLINE | ID: mdl-22190358

ABSTRACT

Recently, there has been an increased interest in quantitative MR parameters to improve diagnosis and treatment. Parameter mapping requires multiple images acquired with different timings usually resulting in long acquisition times. While acquisition time can be reduced by acquiring undersampled data, obtaining accurate estimates of parameters from undersampled data is a challenging problem, in particular for structures with high spatial frequency content. In this work, principal component analysis is combined with a model-based algorithm to reconstruct maps of selected principal component coefficients from highly undersampled radial MRI data. This novel approach linearizes the cost function of the optimization problem yielding a more accurate and reliable estimation of MR parameter maps. The proposed algorithm--reconstruction of principal component coefficient maps using compressed sensing--is demonstrated in phantoms and in vivo and compared with two other algorithms previously developed for undersampled data.


Subject(s)
Algorithms , Data Compression/methods , Image Enhancement/methods , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging/methods , Signal Processing, Computer-Assisted , Humans , Principal Component Analysis , Reproducibility of Results , Sample Size , Sensitivity and Specificity
5.
Atten Percept Psychophys ; 83(6): 2634-2655, 2021 Aug.
Article in English | MEDLINE | ID: mdl-33864205

ABSTRACT

In the perception of self-motion, visual cues originating from an embodied humanoid avatar seen from a first-person perspective (1st-PP) are processed in the same way as those originating from a person's own body. Here, we sought to determine whether the user's and avatar's bodies in virtual reality have to be colocalized for this visual integration. In Experiment 1, participants saw a whole-body avatar in a virtual mirror facing them. The mirror perspective could be supplemented with a fully visible 1st-PP avatar or a suggested one (with the arms hidden by a virtual board). In Experiment 2, the avatar was viewed from the mirror perspective or a third-person perspective (3rd-PP) rotated 90° left or right. During an initial embodiment phase in both experiments, the avatar's forearms faithfully reproduced the participant's real movements. Next, kinaesthetic illusions were induced on the static right arm from the vision of passive displacements of the avatar's arms enhanced by passive displacement of the participant's left arm. Results showed that this manipulation elicited kinaesthetic illusions regardless of the avatar's perspective in Experiments 1 and 2. However, illusions were more likely to occur when the mirror perspective was supplemented with the view of the 1st-PP avatar's body than with the mirror perspective only (Experiment 1), just as they are more likely to occur in the latter condition than with the 3rd-PP (Experiment 2). Our results show that colocalization of the user's and avatar's bodies is an important, but not essential, factor in visual integration for self-motion perception.


Subject(s)
Illusions , Virtual Reality , Cues , Humans , Movement , Self Concept , Visual Perception
6.
Med Phys ; 48(3): 1026-1038, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33128288

ABSTRACT

PURPOSE: Digital breast tomosynthesis (DBT) is a limited-angle tomographic breast imaging modality that can be used for breast cancer screening in conjunction with full-field digital mammography (FFDM) or synthetic mammography (SM). Currently, there are five commercial DBT systems that have been approved by the U.S. FDA for breast cancer screening, all varying greatly in design and imaging protocol. Because the systems are different in technical specifications, there is a need for a quantitative approach for assessing them. In this study, the DBT systems are assessed using a novel methodology with an inkjet-printed anthropomorphic phantom and four alternative forced choice (4AFC) study scheme. METHOD: A breast phantom was fabricated using inkjet printing and parchment paper. The phantom contained 5-mm spiculated masses fabricated with potassium iodide (KI)-doped ink and microcalcifications (MCs) made with calcium hydroxyapatite. Images of the phantom were acquired on all five systems with DBT, FFDM, and SM modalities where available using beam settings under automatic exposure control. A 4AFC study was conducted to assess reader performance with each signal under each modality. Statistical analysis was performed on the data to determine proportion correct (PC), standard deviations, and levels of significance. RESULTS: For masses, overall detection was highest with DBT. The difference in PC was statistically significant between DBT and SM for most systems. A relationship was observed between increasing PC and greater gantry span. For MCs, performance was highest with DBT and FFDM compared to SM. The difference between PC of DBT and PC of SM was statistically significant for all manufacturers. CONCLUSIONS: This methodology represents a novel approach for evaluating systems. This study is the first of its kind to use an inkjet-printed anthropomorphic phantom with realistic signals to assess performance of clinical DBT imaging systems.


Subject(s)
Breast Diseases , Breast Neoplasms , Mammography , Breast/diagnostic imaging , Breast Neoplasms/diagnostic imaging , Humans , Phantoms, Imaging , Radiographic Image Enhancement
7.
Psychol Sci ; 21(12): 1746-50, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21051523

ABSTRACT

The ability to assess genetic ties is critical to defining one's own family and, in a broader context, to understanding relationships in groups of strangers. To recognize younger siblings as such, human firstborns can rely on the perinatal association of the mother with her new baby. Later-borns, who cannot rely on such an association, will by necessity actuate alternate strategies, such as recognition of facial clues set aside by firstborns. The effects of such differential early experiences deserve consideration; the development of matching abilities may be used throughout an individual's lifetime to detect other kinship types outside the family. In simple cognitive tasks based on matching face pictures, later-borns surpassed firstborns in detecting kinship among strangers; this pattern was found in populations of different ages and in two countries. This birth-order effect contrasts with the traditional cognitive advantage of firstborns. Inclusive fitness theory explains how early life history promotes specific strategies that can, in turn, permanently enhance human performance in certain domains.


Subject(s)
Birth Order/psychology , Family/psychology , Adolescent , Adult , Child , Face , Female , Humans , Male , Recognition, Psychology , Sibling Relations , Young Adult
8.
J Med Imaging (Bellingham) ; 7(1): 012703, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31763356

ABSTRACT

We evaluated whether using synthetic mammograms for training data augmentation may reduce the effects of overfitting and increase the performance of a deep learning algorithm for breast mass detection. Synthetic mammograms were generated using in silico procedural analytic breast and breast mass modeling algorithms followed by simulated x-ray projections of the breast models into mammographic images. In silico breast phantoms containing masses were modeled across the four BI-RADS breast density categories, and the masses were modeled with different sizes, shapes, and margins. A Monte Carlo-based x-ray transport simulation code, MC-GPU, was used to project the three-dimensional phantoms into realistic synthetic mammograms. 2000 mammograms with 2522 masses were generated to augment a real data set during training. From the Curated Breast Imaging Subset of the Digital Database for Screening Mammography (CBIS-DDSM) data set, we used 1111 mammograms (1198 masses) for training, 120 mammograms (120 masses) for validation, and 361 mammograms (378 masses) for testing. We used faster R-CNN for our deep learning network with pretraining from ImageNet using the Resnet-101 architecture. We compared the detection performance when the network was trained using different percentages of the real CBIS-DDSM training set (100%, 50%, and 25%), and when these subsets of the training set were augmented with 250, 500, 1000, and 2000 synthetic mammograms. Free-response receiver operating characteristic (FROC) analysis was performed to compare performance with and without the synthetic mammograms. We generally observed an improved test FROC curve when training with the synthetic images compared to training without them, and the amount of improvement depended on the number of real and synthetic images used in training. Our study shows that enlarging the training data with synthetic samples can increase the performance of deep learning systems.

9.
Proc Biol Sci ; 276(1670): 3193-200, 2009 Sep 07.
Article in English | MEDLINE | ID: mdl-19535369

ABSTRACT

The resemblance between human faces has been shown to be a possible cue in recognizing the relatedness between parents and children, and more recently, between siblings. However, the general inclusive fitness theory proposes that kin-selective behaviours are also relevant to more distant relatives, which requires the detection of larger kinship bonds. We conducted an experiment to explore the use of facial clues by 'strangers', i.e. evaluators from a different family, to associate humans of varying degrees of relatedness. We hypothesized that the visual capacity to detect relatedness should be weaker with lower degrees of relatedness. We showed that human adults are capable of (although not very efficient at) assessing the relatedness of unrelated individuals from photographs and that visible facial cues vary according to the degree of relatedness. This sensitivity exists even for kin pair members that are more than a generation apart and have never lived together. Collectively, our findings are in agreement with emerging knowledge on the role played by facial resemblance as a kinship cue. But we have progressed further to show how the capacity to distinguish between related and non-related pairs applies to situations relevant to indirect fitness.


Subject(s)
Face/anatomy & histology , Pattern Recognition, Visual/physiology , Adult , Female , Humans , Male
10.
Magn Reson Med ; 61(6): 1415-24, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19353651

ABSTRACT

Three-point Dixon methods have been investigated as a means to generate water and fat images without the effects of field inhomogeneities. Recently, an iterative algorithm (IDEAL, iterative decomposition of water and fat with echo asymmetry and least squares estimation) was combined with a gradient and spin-echo acquisition strategy (IDEAL-GRASE) to provide a time-efficient method for lipid-water imaging with correction for the effects of field inhomogeneities. The method presented in this work combines IDEAL-GRASE with radial data acquisition. Radial data sampling offers robustness to motion over Cartesian trajectories as well as the possibility of generating high-resolution T(2) maps in addition to the water and fat images. The radial IDEAL-GRASE technique is demonstrated in phantoms and in vivo for various applications including abdominal, pelvic, and cardiac imaging.


Subject(s)
Algorithms , Image Interpretation, Computer-Assisted/methods , Lipids/analysis , Magnetic Resonance Imaging/methods , Magnetic Resonance Spectroscopy/methods , Pelvis/anatomy & histology , Pelvis/physiology , Water/analysis , Humans , Image Enhancement/methods , Reproducibility of Results , Sensitivity and Specificity
11.
Neuroscience ; 416: 30-40, 2019 09 15.
Article in English | MEDLINE | ID: mdl-31377453

ABSTRACT

Humans can recognize living organisms and understand their actions solely on the basis of a small animated set of well-positioned points of light, i.e. by recognizing biological motion. Our aim was to determine whether this type of recognition and integration also occurs during the perception of one's own movements. The participants (60 females) were immersed with a virtual reality headset in a virtual environment, either dark or illuminated, in which they could see a humanoid avatar from a first-person perspective. The avatar's forearms were either realistic or represented by three points of light. Embodiment was successfully achieved through a 1-min period during which either the realistic or point-light avatar's forearms faithfully reproduced voluntary flexion-extension movements. Then, the "virtual mirror paradigm" was used to evoke kinesthetic illusions. In this paradigm, a passive flexion-extension of the participant's left arm was coupled with the movements of the avatar's forearms. This combined visuo-proprioceptive stimulation, was compared with unimodal stimulation (either visual or proprioceptive stimulation only). We found that combined visuo-proprioceptive stimulation with realistic avatars evoked more vivid kinesthetic illusions of a moving right forearm than unimodal stimulations, regardless of whether the virtual environment was dark or illuminated. Kinesthetic illusions also occurred with point-light avatars, albeit less frequently and a little less intense, and only when the visual environment was optimal for slow motion detection of the point-light display (lit environment). We conclude that kinesthesia does not require visual access to an elaborate representation of a body segment. Access to biological movement can be sufficient.


Subject(s)
Illusions/physiology , Movement/physiology , Psychomotor Performance/physiology , Visual Perception/physiology , Female , Humans , Proprioception/physiology , User-Computer Interface , Virtual Reality
12.
Med Phys ; 46(9): 3883-3892, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31135960

ABSTRACT

PURPOSE: The advent of three-dimensional breast imaging systems such as digital breast tomosynthesis (DBT) has great promise for improving the detection and diagnosis of breast cancer. With these new technologies comes an essential need for testing methods to assess the resultant image quality. Although randomized clinical trials are the gold standard for assessing image quality, phantom-based studies can provide a simpler and less burdensome approach. In this work, a complete framework is presented for task-based evaluation of microcalcification (MCs) detection performance for DBT imaging systems. METHODS: The framework consists of three parts. The first part is a realistic anthropomorphic physical breast phantom created through inkjet printing, with parchment paper and iodine-doped ink. The second is a method for inserting realistic MCs fabricated from calcium hydroxyapatite. The reproducibility and stability of the phantom materials were investigated through multiple samples of parchment and ink over 6 months. The final part is an analysis using a four-alternative forced choice (4AFC) reader study. To demonstrate the framework, a task-based 4AFC study was conducted using a clinical system to compare performance from DBT, synthetic mammography (SM), and full-field digital mammography (FFDM). Nine human observers read images containing MC clusters imaged with all three modalities and tried to correctly locate the MCs. The proportion correct (PC) was measured as the number of correctly detected clusters out of all trials. RESULTS: Overall, readers scored the highest with FFDM, (PC = 0.95 ± 0.03) then DBT (0.85 ± 0.04), and finally SM (0.44 ± 0.06). For the parchment and ink samples, the linear attenuation properties were very stable over 6 months. In addition, little difference was found between the various parchment and ink samples, indicating good reproducibility. CONCLUSIONS: This framework presents a promising methodology for evaluating diagnostic task performance of clinical breast DBT systems.


Subject(s)
Breast/diagnostic imaging , Calcinosis/diagnostic imaging , Ink , Mammography/instrumentation , Phantoms, Imaging , Printing , Humans , Image Processing, Computer-Assisted
13.
Med Phys ; 46(9): 3924-3928, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31228352

ABSTRACT

PURPOSE: In silico imaging clinical trials are emerging alternative sources of evidence for regulatory evaluation and are typically cheaper and faster than human trials. In this Note, we describe the set of in silico imaging software tools used in the VICTRE (Virtual Clinical Trial for Regulatory Evaluation) which replicated a traditional trial using a computational pipeline. MATERIALS AND METHODS: We describe a complete imaging clinical trial software package for comparing two breast imaging modalities (digital mammography and digital breast tomosynthesis). First, digital breast models were developed based on procedural generation techniques for normal anatomy. Second, lesions were inserted in a subset of breast models. The breasts were imaged using GPU-accelerated Monte Carlo transport methods and read using image interpretation models for the presence of lesions. All in silico components were assembled into a computational pipeline. The VICTRE images were made available in DICOM format for ease of use and visualization. RESULTS: We describe an open-source collection of in silico tools for running imaging clinical trials. All tools and source codes have been made freely available. CONCLUSION: The open-source tools distributed as part of the VICTRE project facilitate the design and execution of other in silico imaging clinical trials. The entire pipeline can be run as a complete imaging chain, modified to match needs of other trial designs, or used as independent components to build additional pipelines.


Subject(s)
Clinical Trials as Topic , Computer Simulation , Mammography/methods , Humans , Image Processing, Computer-Assisted , Software
14.
IEEE Trans Radiat Plasma Med Sci ; 3(1): 1-23, 2019 Jan.
Article in English | MEDLINE | ID: mdl-30740582

ABSTRACT

Over the past decades, significant improvements have been made in the field of computational human phantoms (CHPs) and their applications in biomedical engineering. Their sophistication has dramatically increased. The very first CHPs were composed of simple geometric volumes, e.g., cylinders and spheres, while current CHPs have a high resolution, cover a substantial range of the patient population, have high anatomical accuracy, are poseable, morphable, and are augmented with various details to perform functionalized computations. Advances in imaging techniques and semi-automated segmentation tools allow fast and personalized development of CHPs. These advances open the door to quickly develop personalized CHPs, inherently including the disease of the patient. Because many of these CHPs are increasingly providing data for regulatory submissions of various medical devices, the validity, anatomical accuracy, and availability to cover the entire patient population is of utmost importance. The article is organized into two main sections: the first section reviews the different modeling techniques used to create CHPs, whereas the second section discusses various applications of CHPs in biomedical engineering. Each topic gives an overview, a brief history, recent developments, and an outlook into the future.

15.
Behav Processes ; 157: 337-345, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30059762

ABSTRACT

Odontocetes modulate the rhythm of their echolocation clicks to draw information about their environment. When they approach preys to capture, they speed up their emissions to increase the sampling rate of "distant touch" and improve information update. This global acceleration turns into a "terminal buzz" also described in bats, which is a click train with drastic increase in rate, just as reaching the prey. This study documents and analyses under human care bottlenose dolphins' echolocation activity, when approaching non-alimentary targets. Four dolphins' locomotor and clicking behaviours were recorded during training sessions, when sent to immersed objects pointed by their trainers. Results illustrate that these dolphins profusely use echolocation towards immersed non-alimentary objects. They accelerate click emission when approaching the target, thus displaying a classical terminal buzz. However, their terminal buzz slackens off within a quarter of second before the end of click train. Typically, they decelerate to stop clicking just before they touch the object using their rostrum lower tip. They do not emit clicks as the contact lasts. In conclusion, when exploring inert objects, bottlenose dolphins under human accelerate clicking like other odontocetes or bats approaching preys. Bottlenose dolphins' particular slackening-off profile at the end of the buzz shows that they anticipate the moment of direct contact, and they stop just as real touch relays distant touch of the object.


Subject(s)
Bottle-Nosed Dolphin/physiology , Echolocation/physiology , Touch/physiology , Animals , Sound Spectrography
16.
JAMA Netw Open ; 1(7): e185474, 2018 11 02.
Article in English | MEDLINE | ID: mdl-30646401

ABSTRACT

Importance: Expensive and lengthy clinical trials can delay regulatory evaluation of innovative technologies, affecting patient access to high-quality medical products. Simulation is increasingly being used in product development but rarely in regulatory applications. Objectives: To conduct a computer-simulated imaging trial evaluating digital breast tomosynthesis (DBT) as a replacement for digital mammography (DM) and to compare the results with a comparative clinical trial. Design, Setting, and Participants: The simulated Virtual Imaging Clinical Trial for Regulatory Evaluation (VICTRE) trial was designed to replicate a clinical trial that used human patients and radiologists. Images obtained with in silico versions of DM and DBT systems via fast Monte Carlo x-ray transport were interpreted by a computational reader detecting the presence of lesions. A total of 2986 synthetic image-based virtual patients with breast sizes and radiographic densities representative of a screening population and compressed thicknesses from 3.5 to 6 cm were generated using an analytic approach in which anatomical structures are randomly created within a predefined breast volume and compressed in the craniocaudal orientation. A positive cohort contained a digitally inserted microcalcification cluster or spiculated mass. Main Outcomes and Measures: The trial end point was the difference in area under the receiver operating characteristic curve between modalities for lesion detection. The trial was sized for an SE of 0.01 in the change in area under the curve (AUC), half the uncertainty in the comparative clinical trial. Results: In this trial, computational readers analyzed 31 055 DM and 27 960 DBT cases from 2986 virtual patients with the following Breast Imaging Reporting and Data System densities: 286 (9.6%) extremely dense, 1200 (40.2%) heterogeneously dense, 1200 (40.2%) scattered fibroglandular densities, and 300 (10.0%) almost entirely fat. The mean (SE) change in AUC was 0.0587 (0.0062) (P < .001) in favor of DBT. The change in AUC was larger for masses (mean [SE], 0.0903 [0.008]) than for calcifications (mean [SE], 0.0268 [0.004]), which was consistent with the findings of the comparative trial (mean [SE], 0.065 [0.017] for masses and -0.047 [0.032] for calcifications). Conclusions and Relevance: The results of the simulated VICTRE trial are consistent with the performance seen in the comparative trial. While further research is needed to assess the generalizability of these findings, in silico imaging trials represent a viable source of regulatory evidence for imaging devices.


Subject(s)
Mammography/methods , Mammography/standards , Breast/diagnostic imaging , Breast Neoplasms/diagnostic imaging , Calcinosis/diagnostic imaging , Computer Simulation , Female , Humans , ROC Curve
17.
Curr Biol ; 14(9): 818-23, 2004 May 04.
Article in English | MEDLINE | ID: mdl-15120076

ABSTRACT

The field generated by the electric organ of weakly electric fish varies with the electrical properties of nearby objects. Correspondingly, current fluxes in this field differentially stimulate the electroreceptors in the fish's skin. Thus, resistors are to conductors and insulators as gray is to black and white in optics. Additionally, the capacitances of plants and insect larvae contrast with those of water or stones, giving effects comparable to "coloration". Receptors arrayed over a large area of the skin act like a retina upon which the discharge projects "electric images". By further central processing, the fish also discriminate between objects according to their composition, size, or distance, a procedure termed "electrolocation", analogous to echolocation in bats. Here we demonstrate that G. petersii and S. macrurus can also recognize 3D orientations and configurations and extract and generalize spatial features solely with their electrical sense. We presented fish with virtual electrical "objects" formed from electrodes set flush in the inner surface of a Y maze with various patterns of external connectivity. With reward and aversion training, the fish could recognize similar electrode configurations and extract a feature, e.g., a vertical connectivity, present in various novel configurations. Previously, shape recognition has only been shown in electrolocating fish when they are in full mechanical contact with solid objects.


Subject(s)
Discrimination Learning , Electric Fish/physiology , Electric Organ/physiology , Psychomotor Performance/physiology , Space Perception/physiology , Spatial Behavior/physiology , Animals , Electric Stimulation , Electrodes , Electrophysiology
18.
Med Phys ; 44(2): 407-416, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27992059

ABSTRACT

PURPOSE: Physical phantoms are central to the evaluation of 2D and 3D breast-imaging systems. Currently, available physical phantoms have limitations including unrealistic uniform background structure, large expense, or excessive fabrication time. The purpose of this work is to outline a method for rapidly creating realistic, inexpensive physical anthropomorphic phantoms for use in full-field digital mammography (FFDM) and digital breast tomosynthesis (DBT). METHODS: The phantom was first modeled using analytical expressions and then discretized into voxels of a specified size. The interior of the breast was divided into glandular and adipose tissue classes using Voronoi segmentation, and additional structures like blood vessels, chest muscle, and ligaments were added. The physical phantom was then fabricated from the virtual model in a slice by slice fashion through inkjet printing, using parchment paper and a radiopaque ink containing 33% (I33% ) or 25% (I25% ) iohexol by volume. Three types of parchment paper (P1, P2, and P3) were examined. The phantom materials were characterized in terms of their effective linear attenuation coefficients (µeff ) using full-field digital mammography (FFDM) and their energy-dependent linear attenuation coefficients (µ(E)) using a spectroscopic energy discriminating detector system. The printing method was further validated on the basis of accuracy, print consistency, and the reproducibility of ink batches. RESULTS: The µeff of two types of parchment paper were close to that of adipose tissue, with µeff = 0.61 ± 0.05 cm-1 for P1, 0.61 ± 0.04 cm-1 for P2, and 0.57 ± 0.03 cm-1 for adipose tissue. The addition of the iodinated ink increased the effective attenuation to that of glandular tissue, with µeff = 0.89 ± 0.06 cm-1 for P1 + I25% and 0.94 ± 0.06 cm-1 for P1 + I33% compared to 0.90 ± 0.03 cm-1 for glandular tissue. Spectroscopic measurements showed a good match between the parchment paper and reference values for adipose and glandular tissues across photon energies. Good accuracy was found between the model and the printed phantom by comparing a FFDM of the virtual model simulated through Monte Carlo with a real FFDM of the fully printed phantom. High consistency was found over multiple prints, with 3% variability in mean ink signal across various samples. Reproducibility of ink consistency was very high with <1% variation signal from multiple batches of ink. Imaging of the phantom using FFDM and DBT systems showed promising utility for 2D and 3D imaging. CONCLUSIONS: A novel, realistic breast phantom can be created using an analytically defined breast model and readily available materials. The work provides a method to fabricate any virtual phantom in a manner that is accurate, inexpensive, easily accessible, and can be made with different materials or breast models.


Subject(s)
Breast , Mammography/instrumentation , Models, Anatomic , Phantoms, Imaging , Computer Simulation , Equipment Design , Humans , Imaging, Three-Dimensional/instrumentation , Monte Carlo Method , Printing/methods , Reproducibility of Results
19.
Burns ; 32(5): 570-6, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16713682

ABSTRACT

Severe burn injuries affect not only the release of stress hormones but also the metabolism of nitric oxide (NO), a substance playing a large role in cognition. We investigated the effect of third-degree burns both on central NO-levels and on short-term memory in rats. Burns were administered under halothane-anesthesia by dipping 20% of the skin area in hot water. In a first experiment, NO-changes were estimated over hours by differential normal pulse voltammetry (DPNV) with a sensor implanted chronically in the frontal cortex. In a second experiment, cognitive abilities were tested over days by comparing the spontaneous time used to explore objects that the animals had, either never- or already-encountered before. Cerebral NO appeared steadily depleted for at least 12h after the injury, not after control anesthesia. During nine days following the burn, discrimination performance was lower compared to controls. Putting together the results of the two experiments, especially on the day of burn, NO changes are likely to account for the behavioral effect. A choice of neuro-pharmacological agents involved in NO-metabolism, together with a choice of proper anesthetics, should now be tested as means to alleviate cognitive impairments following third-degree burns.


Subject(s)
Burns/psychology , Memory Disorders/etiology , Animals , Brain Chemistry , Burns/metabolism , Male , Nitric Oxide/metabolism , Rats , Rats, Wistar
20.
Appl Bionics Biomech ; 2015: 543492, 2015.
Article in English | MEDLINE | ID: mdl-27019586

ABSTRACT

Background. Common manufactured depth sensors generate depth images that humans normally obtain from their eyes and hands. Various designs converting spatial data into sound have been recently proposed, speculating on their applicability as sensory substitution devices (SSDs). Objective. We tested such a design as a travel aid in a navigation task. Methods. Our portable device (MeloSee) converted 2D array of a depth image into melody in real-time. Distance from the sensor was translated into sound intensity, stereo-modulated laterally, and the pitch represented verticality. Twenty-one blindfolded young adults navigated along four different paths during two sessions separated by one-week interval. In some instances, a dual task required them to recognize a temporal pattern applied through a tactile vibrator while they navigated. Results. Participants learnt how to use the system on both new paths and on those they had already navigated from. Based on travel time and errors, performance improved from one week to the next. The dual task was achieved successfully, slightly affecting but not preventing effective navigation. Conclusions. The use of Kinect-type sensors to implement SSDs is promising, but it is restricted to indoor use and it is inefficient on too short range.

SELECTION OF CITATIONS
SEARCH DETAIL