Dispersion Effects on the Thermodynamics and Transition States of Dimethylarsinic Acid Adsorption on Hydrated Iron (Oxyhydr)oxide Clusters from Density Functional Theory Calculations.

Reaction pathway information and transition states are crucial for understanding adsorption mechanisms of pollutants, such as dimethylarsinic acid (DMA), at the liquid-solid interface. We report a detailed computational analysis of the complexes of DMA on iron (oxyhydr)oxides, including activation energies, transition states, Gibbs free energies of adsorption, Mulliken charges, charge redistribution upon adsorption, and stretching frequencies of As-O bonds for comparison with experimental spectroscopic data. Calculations were performed using density functional theory (DFT) at the B3LYP/6-311+G(d,p) level using both implicit and explicit hydration. For comparison, calculations were also performed for arsenate. Dispersion corrections were included since experimental data showed that DMA forms mostly outer-sphere complexes. Calculated electronic energies indicate that dispersion corrections are important when dealing with outer-sphere complexes, and that there is a high activation barrier of ca. 43 kJ mol-1 to transition from mono- to bidentate DMA complexes. Additionally, extending the modeled iron (oxyhydr)oxides surface to include four Fe centers and analyzing the charge distribution upon adsorption of DMA reveals that electrostatics play a role in the transition from outer-sphere to monodentate complexes. The significance of our results for the overall surface complexation mechanism of DMA and arsenate is discussed.

Thermodynamics of dimethylarsinic acid and arsenate interactions with hydrated iron-(oxyhydr)oxide clusters: DFT calculations.

Dimethylarsinic Acid (DMA) belongs to an important class of organoarsenical compounds commonly detected in arsenic speciation studies of environmental samples and pyrolysis products of fossil fuels. Transformation of DMA under certain conditions leads to the formation of other forms of arsenic, which could be more toxic than DMA to biota, and more efficient in deactivating catalysts used in petrochemical refining. Published surface sensitive X-ray and infrared spectroscopic work suggested that DMA simultaneously forms inner- and outer-sphere complexes with iron-(oxyhydr)oxides. Computational work on the complexation of arsenicals with various surfaces of environmental and industrial interest provides useful information that aids in the interpretation of experimental spectroscopic data as well as predictions of thermodynamic favorability of surface interactions. We report herein Gibbs free energies of adsorption, ΔG(ads), for various ligand exchange reactions between hydrated complexes of DMA and Fe-(oxyhydr)oxide clusters calculated using density functional theory (DFT) at the B3LYP/6-311+G(d,p) level. Calculations using arsenate were also performed for comparison. Calculated As-(O,Fe) distances and stretching frequencies of As-O bonds are also reported for comparison with experimental spectroscopic data. Gibbs free energies of desorption, ΔG(des), due to reactions with phosphorus species at pH 7 are reported as well. Our results indicate that the formation of both inner- and outer-sphere DMA complexes is thermodynamically favorable, with the former having a more negative ΔG(ads). Values of ΔG(des) indicate that desorption favorability of DMA complexes increases in this order: bidentate < mondentate < outersphere. The significance of our results for the overall surface complexation mechanism of DMA is discussed.

Relativistic-consistent electron densities of the coinage metal clusters M2, M4, M4(2-), and M4Na2 (M = Cu, Ag, Au): a QTAIM study.

We employ second-order Møller-Plesset perturbation theory level in combination with recently developed pseudopotential-based correlation consistent basis sets to obtain accurate relativistic-consistent electron densities for small coinage metal clusters. Using calculated electron densities, we employ Bader's quantum theory of atoms in molecules (QTAIM) to gain insights into the nature of metal-metal bonding in the clusters M(2), M(4), M(4)(2-), and M(4)Na(2) (M = Cu, Ag, Au). For the simplest case of the metal dimer, M(2), we correlate the strength of the metal-metal bond with the value of the electron density at the bond critical point, the total energy density at the bond critical point, the sharing (delocalization) index, and the values of the two principle negative curvatures. We then consider changes to the metal-metal bonding and charge density distribution upon the addition of two metal atoms to form the metal tetramer, M(4), and then followed by the addition of an electron pair to form M(4)(2-) and finally followed by the addition of two alkali metal (sodium) ions to form M(4)Na(2). Using topological properties of the electron density, we present evidence for the existence of σ-aromaticity in Au(4)(2-). We also report the existence of two non-nuclear attractors in the molecular graph of Cu(4)(2-) and large negative charge accumulation in the nonbonded Cu basins of this cluster.

Insights into the surface complexation of dimethylarsinic acid on iron (oxyhydr)oxides from ATR-FTIR studies and quantum chemical calculations.

The surface chemistry of methylated arsenicals with ubiquitous geosorbents and industrial catalysts is poorly understood. These arsenic compounds pose both a health and an environmental risk in addition to being a challenge to the energy industry. We report herein a detailed spectroscopic analysis of the surface structure of dimethylarsinic acid (DMA) adsorbed on hematite and goethite using attenuated total internal reflectance Fourier transform infrared spectroscopy (ATR-FTIR). Spectra of adsorbed DMA, DMA(ads), were collected in situ as a function of pH and ionic strength, using both H(2)O and D(2)O at 298 K in flow mode. Experimental data were complemented with DFT calculations of geometries and frequencies of hydrated DMA-iron oxide clusters. Results indicate the simultaneous formation of inner- and outer-sphere complexes with distinct spectral components. Desorption behavior of DMA due to chloride and phosphate was studied as a function of time from the decrease in the absorbance of apparent spectral features. The impact of our studies on the environmental fate of DMA in geochemical environments and the design of technologies to reduce arsenic content in fuels are discussed.

Experimental and theoretical study on activation of the C-H bond in pyridine by [M(m)]- (M = Cu, Ag, Au, m = 1-3).

Activation of the C-H bond of pyridine by [M(m)](-) (M = Cu, Ag, Au, m = 1-3) is investigated by experiment and theory. Complexes of coinage metal clusters and the pyridyl group, [M(m)-C(5)H(4)N](-), are produced from reactions between metal clusters formed by laser ablation of coinage metal samples and pyridine molecules seeded in argon carrier gas. We examine the structure and formation mechanism of these pyridyl-coinage metal complexes. Our study shows that C(5)H(4)N bonds to the metal clusters through a M-C sigma bond and [M(m)-C(5)H(4)N](-) is produced via a stepwise mechanism. The first step is a direct insertion reaction between [M(m)](-) and C(5)H(5)N with activation of the C-H bond to yield the intermediate [HM(m)-C(5)H(4)N](-). The second step is H atom abstraction by a neutral metal atom to yield [M(m)-C(5)H(4)N](-).

Interacting electrons, spin statistics, and information theory.

We consider a nearly (or quasi) uniform gas of interacting electrons for which spin statistics play a crucial role. A previously developed procedure, based on the extension of the Levy-Lieb constrained search principle and Monte Carlo sampling of electron configurations in space, allows us to approximate the form of the kinetic-energy functional. For a spinless electron gas, this procedure led to a correlation term, which had the form of the Shannon entropy, but the resulting kinetic-energy functional does not satisfy the Lieb-Thirring inequality, which is rigorous and one of the most general relations regarding the kinetic energy. In this paper, we show that when the fermionic character of the electrons is included via a statistical spin approach, our procedure leads to correlation terms, which also have the form of the Shannon entropy and the resulting kinetic-energy functional does satisfy the Lieb-Thirring inequality. In this way we further strengthen the connection between Shannon entropy and electron correlation and, more generally, between information theory and quantum mechanics.

A series of intrinsically chiral gold nanocage structures.

We present a series of intrinsically chiral gold nanocage structures, Au9n+6, which are stable for n ≥ 2. These structures consist of an Au9n tube which is capped with Au3 units at each end. Removing the Au3 caps, we obtain a series of intrinsically chiral gold nanotube structures, Au9n, which are stable for n ≥ 4. The intrinsic chirality of these structures results from the helicity of the gold strands which form the tube and not because an individual Au atom is a chiral center. The symmetry of these structures is C3 and substructures of gold hexagons with a gold atom in the middle are particularly prominent. We focus on the properties of Au42 (C3) and Au105 (C3) which are the two smallest gold nanocage structures to be completely tiled by these Au7 "golden-eye" substructures. Our main focus is on Au42 (C3) since gold clusters in the 40-50 atom regime are currently being investigated in gas phase experiments. We show that the intrinsically chiral Au42 cage structure is energetically comparable with previously reported achiral cage and compact Au42 structures. Cage structures are of particular interest because species can be encapsulated (and stabilized) inside the cage and we provide strong evidence that Au6@Au42 (C3) is the global minimum Au48 structure. The intrinsically chiral gold nanocage structures, which exhibit a range of size-related properties, have potential applications in chiral catalysis and as components in nanostructured devices.