Search | Virtual Health Library

1.

Design, construction, and in vivo augmentation of a complex gut microbiome.

Cheng, Alice G; Ho, Po-Yi; Aranda-Díaz, Andrés; Jain, Sunit; Yu, Feiqiao B; Meng, Xiandong; Wang, Min; Iakiviak, Mikhail; Nagashima, Kazuki; Zhao, Aishan; Murugkar, Pallavi; Patil, Advait; Atabakhsh, Katayoon; Weakley, Allison; Yan, Jia; Brumbaugh, Ariel R; Higginbottom, Steven; Dimas, Alejandra; Shiver, Anthony L; Deutschbauer, Adam; Neff, Norma; Sonnenburg, Justin L; Huang, Kerwyn Casey; Fischbach, Michael A.

Cell ; 185(19): 3617-3636.e19, 2022 09 15.

Article in English | MEDLINE | ID: mdl-36070752

2.

Translating the Physical Code of Life.

Knapp, Benjamin D; Huang, Kerwyn Casey.

Cell ; 174(2): 253-255, 2018 07 12.

Article in English | MEDLINE | ID: mdl-30007414

3.

How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction.

Shi, Handuo; Bratton, Benjamin P; Gitai, Zemer; Huang, Kerwyn Casey.

Cell ; 172(6): 1294-1305, 2018 03 08.

Article in English | MEDLINE | ID: mdl-29522748

4.

Transient Osmotic Perturbation Causes Long-Term Alteration to the Gut Microbiota.

Tropini, Carolina; Moss, Eli Lin; Merrill, Bryan Douglas; Ng, Katharine Michelle; Higginbottom, Steven Kyle; Casavant, Ellen Pun; Gonzalez, Carlos Gutierrez; Fremin, Brayon; Bouley, Donna Michelle; Elias, Joshua Eric; Bhatt, Ami Siddharth; Huang, Kerwyn Casey; Sonnenburg, Justin Laine.

Cell ; 173(7): 1742-1754.e17, 2018 06 14.

Article in English | MEDLINE | ID: mdl-29906449

5.

Staying in Touch while on the Go.

Huang, Kerwyn Casey.

Cell ; 168(1-2): 15-17, 2017 01 12.

Article in English | MEDLINE | ID: mdl-28086088

6.

A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis.

Bartlett, Thomas M; Bratton, Benjamin P; Duvshani, Amit; Miguel, Amanda; Sheng, Ying; Martin, Nicholas R; Nguyen, Jeffrey P; Persat, Alexandre; Desmarais, Samantha M; VanNieuwenhze, Michael S; Huang, Kerwyn Casey; Zhu, Jun; Shaevitz, Joshua W; Gitai, Zemer.

Cell ; 168(1-2): 172-185.e15, 2017 Jan 12.

Article in English | MEDLINE | ID: mdl-28086090

7.

A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria.

Peters, Jason M; Colavin, Alexandre; Shi, Handuo; Czarny, Tomasz L; Larson, Matthew H; Wong, Spencer; Hawkins, John S; Lu, Candy H S; Koo, Byoung-Mo; Marta, Elizabeth; Shiver, Anthony L; Whitehead, Evan H; Weissman, Jonathan S; Brown, Eric D; Qi, Lei S; Huang, Kerwyn Casey; Gross, Carol A.

Cell ; 165(6): 1493-1506, 2016 Jun 02.

Article in English | MEDLINE | ID: mdl-27238023

8.

Profiling the human intestinal environment under physiological conditions.

Shalon, Dari; Culver, Rebecca Neal; Grembi, Jessica A; Folz, Jacob; Treit, Peter V; Shi, Handuo; Rosenberger, Florian A; Dethlefsen, Les; Meng, Xiandong; Yaffe, Eitan; Aranda-Díaz, Andrés; Geyer, Philipp E; Mueller-Reif, Johannes B; Spencer, Sean; Patterson, Andrew D; Triadafilopoulos, George; Holmes, Susan P; Mann, Matthias; Fiehn, Oliver; Relman, David A; Huang, Kerwyn Casey.

Nature ; 617(7961): 581-591, 2023 May.

Article in English | MEDLINE | ID: mdl-37165188

9.

Chemical-genetic interrogation of RNA polymerase mutants reveals structure-function relationships and physiological tradeoffs.

Shiver, Anthony L; Osadnik, Hendrik; Peters, Jason M; Mooney, Rachel A; Wu, Peter I; Henry, Kemardo K; Braberg, Hannes; Krogan, Nevan J; Hu, James C; Landick, Robert; Huang, Kerwyn Casey; Gross, Carol A.

Mol Cell ; 81(10): 2201-2215.e9, 2021 05 20.

Article in English | MEDLINE | ID: mdl-34019789

10.

Staying in Touch while on the Go.

Huang, Kerwyn Casey.

Cell ; 169(1): 174-175, 2017 03 23.

Article in English | MEDLINE | ID: mdl-28340342

11.

Cutting the Gordian Knot of the Microbiota.

Vasquez, Kimberly S; Shiver, Anthony L; Huang, Kerwyn Casey.

Mol Cell ; 70(5): 765-767, 2018 06 07.

Article in English | MEDLINE | ID: mdl-29883604

12.

Chemoproteomic identification of a DPP4 homolog in Bacteroides thetaiotaomicron.

Keller, Laura J; Nguyen, Taylor H; Liu, Lawrence J; Hurysz, Brianna M; Lakemeyer, Markus; Guerra, Matteo; Gelsinger, Danielle J; Chanin, Rachael; Ngo, Nhi; Lum, Kenneth M; Faucher, Franco; Ipock, Phillip; Niphakis, Micah J; Bhatt, Ami S; O'Donoghue, Anthony J; Huang, Kerwyn Casey; Bogyo, Matthew.

Nat Chem Biol ; 19(12): 1469-1479, 2023 Dec.

Article in English | MEDLINE | ID: mdl-37349583

13.

M-TUBE enables large-volume bacterial gene delivery using a high-throughput microfluidic electroporation platform.

Huang, Po-Hsun; Chen, Sijie; Shiver, Anthony L; Culver, Rebecca Neal; Huang, Kerwyn Casey; Buie, Cullen R.

PLoS Biol ; 20(9): e3001727, 2022 09.

Article in English | MEDLINE | ID: mdl-36067229

14.

Feedback linking cell envelope stiffness, curvature, and synthesis enables robust rod-shaped bacterial growth.

Al-Mosleh, Salem; Gopinathan, Ajay; Santangelo, Christian D; Huang, Kerwyn Casey; Rojas, Enrique R.

Proc Natl Acad Sci U S A ; 119(41): e2200728119, 2022 10 11.

Article in English | MEDLINE | ID: mdl-36191183

15.

The outer membrane is an essential load-bearing element in Gram-negative bacteria.

Rojas, Enrique R; Billings, Gabriel; Odermatt, Pascal D; Auer, George K; Zhu, Lillian; Miguel, Amanda; Chang, Fred; Weibel, Douglas B; Theriot, Julie A; Huang, Kerwyn Casey.

Nature ; 559(7715): 617-621, 2018 07.

Article in English | MEDLINE | ID: mdl-30022160

16.

Starvation induces shrinkage of the bacterial cytoplasm.

Shi, Handuo; Westfall, Corey S; Kao, Jesse; Odermatt, Pascal D; Anderson, Sarah E; Cesar, Spencer; Sievert, Montana; Moore, Jeremy; Gonzalez, Carlos G; Zhang, Lichao; Elias, Joshua E; Chang, Fred; Huang, Kerwyn Casey; Levin, Petra Anne.

Proc Natl Acad Sci U S A ; 118(24)2021 06 15.

Article in English | MEDLINE | ID: mdl-34117124

17.

SiCTeC: An inexpensive, easily assembled Peltier device for rapid temperature shifting during single-cell imaging.

Knapp, Benjamin D; Zhu, Lillian; Huang, Kerwyn Casey.

PLoS Biol ; 18(11): e3000786, 2020 11.

Article in English | MEDLINE | ID: mdl-33156840

18.

Bellymount enables longitudinal, intravital imaging of abdominal organs and the gut microbiota in adult Drosophila.

Koyama, Leslie Ann Jaramillo; Aranda-Díaz, Andrés; Su, Yu-Han; Balachandra, Shruthi; Martin, Judy Lisette; Ludington, William B; Huang, Kerwyn Casey; O'Brien, Lucy Erin.

PLoS Biol ; 18(1): e3000567, 2020 01.

Article in English | MEDLINE | ID: mdl-31986129

19.

The inner membrane protein YhdP modulates the rate of anterograde phospholipid flow in Escherichia coli.

Grimm, Jacqueline; Shi, Handuo; Wang, Wei; Mitchell, Angela M; Wingreen, Ned S; Huang, Kerwyn Casey; Silhavy, Thomas J.

Proc Natl Acad Sci U S A ; 117(43): 26907-26914, 2020 10 27.

Article in English | MEDLINE | ID: mdl-33046656

20.

Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron.

Arjes, Heidi A; Sun, Jiawei; Liu, Hualan; Nguyen, Taylor H; Culver, Rebecca N; Celis, Arianna I; Walton, Sophie Jean; Vasquez, Kimberly S; Yu, Feiqiao Brian; Xue, Katherine S; Newton, Daniel; Zermeno, Ricardo; Weglarz, Meredith; Deutschbauer, Adam; Huang, Kerwyn Casey; Shiver, Anthony L.

BMC Biol ; 20(1): 285, 2022 12 17.

Article in English | MEDLINE | ID: mdl-36527020

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Design, construction, and in vivo augmentation of a complex gut microbiome.

Translating the Physical Code of Life.

How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction.

Transient Osmotic Perturbation Causes Long-Term Alteration to the Gut Microbiota.

Staying in Touch while on the Go.

A Periplasmic Polymer Curves Vibrio cholerae and Promotes Pathogenesis.

A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria.

Profiling the human intestinal environment under physiological conditions.

Chemical-genetic interrogation of RNA polymerase mutants reveals structure-function relationships and physiological tradeoffs.

Staying in Touch while on the Go.

Cutting the Gordian Knot of the Microbiota.

Chemoproteomic identification of a DPP4 homolog in Bacteroides thetaiotaomicron.

M-TUBE enables large-volume bacterial gene delivery using a high-throughput microfluidic electroporation platform.

Feedback linking cell envelope stiffness, curvature, and synthesis enables robust rod-shaped bacterial growth.

The outer membrane is an essential load-bearing element in Gram-negative bacteria.

Starvation induces shrinkage of the bacterial cytoplasm.

SiCTeC: An inexpensive, easily assembled Peltier device for rapid temperature shifting during single-cell imaging.

Bellymount enables longitudinal, intravital imaging of abdominal organs and the gut microbiota in adult Drosophila.

The inner membrane protein YhdP modulates the rate of anterograde phospholipid flow in Escherichia coli.

Construction and characterization of a genome-scale ordered mutant collection of Bacteroides thetaiotaomicron.