Search | Virtual Health Library

1.

Why sequence all eukaryotes?

Blaxter, Mark; Archibald, John M; Childers, Anna K; Coddington, Jonathan A; Crandall, Keith A; Di Palma, Federica; Durbin, Richard; Edwards, Scott V; Graves, Jennifer A M; Hackett, Kevin J; Hall, Neil; Jarvis, Erich D; Johnson, Rebecca N; Karlsson, Elinor K; Kress, W John; Kuraku, Shigehiro; Lawniczak, Mara K N; Lindblad-Toh, Kerstin; Lopez, Jose V; Moran, Nancy A; Robinson, Gene E; Ryder, Oliver A; Shapiro, Beth; Soltis, Pamela S; Warnow, Tandy; Zhang, Guojie; Lewin, Harris A.

Proc Natl Acad Sci U S A ; 119(4)2022 01 25.

Article in English | MEDLINE | ID: mdl-35042801

2.

Evolution of the ancestral mammalian karyotype and syntenic regions.

Damas, Joana; Corbo, Marco; Kim, Jaebum; Turner-Maier, Jason; Farré, Marta; Larkin, Denis M; Ryder, Oliver A; Steiner, Cynthia; Houck, Marlys L; Hall, Shaune; Shiue, Lily; Thomas, Stephen; Swale, Thomas; Daly, Mark; Korlach, Jonas; Uliano-Silva, Marcela; Mazzoni, Camila J; Birren, Bruce W; Genereux, Diane P; Johnson, Jeremy; Lindblad-Toh, Kerstin; Karlsson, Elinor K; Nweeia, Martin T; Johnson, Rebecca N; Lewin, Harris A.

Proc Natl Acad Sci U S A ; 119(40): e2209139119, 2022 10 04.

Article in English | MEDLINE | ID: mdl-36161960

3.

Standards recommendations for the Earth BioGenome Project.

Lawniczak, Mara K N; Durbin, Richard; Flicek, Paul; Lindblad-Toh, Kerstin; Wei, Xiaofeng; Archibald, John M; Baker, William J; Belov, Katherine; Blaxter, Mark L; Marques Bonet, Tomas; Childers, Anna K; Coddington, Jonathan A; Crandall, Keith A; Crawford, Andrew J; Davey, Robert P; Di Palma, Federica; Fang, Qi; Haerty, Wilfried; Hall, Neil; Hoff, Katharina J; Howe, Kerstin; Jarvis, Erich D; Johnson, Warren E; Johnson, Rebecca N; Kersey, Paul J; Liu, Xin; Lopez, Jose Victor; Myers, Eugene W; Pettersson, Olga Vinnere; Phillippy, Adam M; Poelchau, Monica F; Pruitt, Kim D; Rhie, Arang; Castilla-Rubio, Juan Carlos; Sahu, Sunil Kumar; Salmon, Nicholas A; Soltis, Pamela S; Swarbreck, David; Thibaud-Nissen, Françoise; Wang, Sibo; Wegrzyn, Jill L; Zhang, Guojie; Zhang, He; Lewin, Harris A; Richards, Stephen.

Proc Natl Acad Sci U S A ; 119(4)2022 01 25.

Article in English | MEDLINE | ID: mdl-35042802

4.

Tracing the introduction of the invasive common myna using population genomics.

Atsawawaranunt, Kamolphat; Ewart, Kyle M; Major, Richard E; Johnson, Rebecca N; Santure, Anna W; Whibley, Annabel.

Heredity (Edinb) ; 131(1): 56-67, 2023 Jul.

Article in English | MEDLINE | ID: mdl-37193854

5.

Future-proofing the koala: Synergising genomic and environmental data for effective species management.

Lott, Matthew J; Wright, Belinda R; Neaves, Linda E; Frankham, Greta J; Dennison, Siobhan; Eldridge, Mark D B; Potter, Sally; Alquezar-Planas, David E; Hogg, Carolyn J; Belov, Katherine; Johnson, Rebecca N.

Mol Ecol ; 31(11): 3035-3055, 2022 06.

Article in English | MEDLINE | ID: mdl-35344635

6.

Photochemically triggered cheletropic formation of cyclopropenone (c-C₃H₂O) from carbon monoxide and electronically excited acetylene.

Wang, Jia; Kleimeier, N Fabian; Johnson, Rebecca N; Gozem, Samer; Abplanalp, Matthew J; Turner, Andrew M; Marks, Joshua H; Kaiser, Ralf I.

Phys Chem Chem Phys ; 24(29): 17449-17461, 2022 Jul 27.

Article in English | MEDLINE | ID: mdl-35713004

7.

Koala methylomes reveal divergent and conserved DNA methylation signatures of X chromosome regulation.

Singh, Devika; Sun, Dan; King, Andrew G; Alquezar-Planas, David E; Johnson, Rebecca N; Alvarez-Ponce, David; Yi, Soojin V.

Proc Biol Sci ; 288(1945): 20202244, 2021 02 24.

Article in English | MEDLINE | ID: mdl-33622136

8.

Tuatara genome reveals diverse insights into a remarkable reptile.

Johnson, Rebecca N.

Nature ; 584(7821): 351-352, 2020 08.

Article in English | MEDLINE | ID: mdl-32760036

9.

Degradation and remobilization of endogenous retroviruses by recombination during the earliest stages of a germ-line invasion.

Löber, Ulrike; Hobbs, Matthew; Dayaram, Anisha; Tsangaras, Kyriakos; Jones, Kiersten; Alquezar-Planas, David E; Ishida, Yasuko; Meers, Joanne; Mayer, Jens; Quedenau, Claudia; Chen, Wei; Johnson, Rebecca N; Timms, Peter; Young, Paul R; Roca, Alfred L; Greenwood, Alex D.

Proc Natl Acad Sci U S A ; 115(34): 8609-8614, 2018 08 21.

Article in English | MEDLINE | ID: mdl-30082403

10.

Correction: Phylogeography of the iconic Australian red-tailed black-cockatoo (Calyptorhynchus banksii) and implications for its conservation.

Ewart, Kyle M; Lo, Nathan; Ogden, Rob; Joseph, Leo; Ho, Simon Y W; Frankham, Greta J; Eldridge, Mark D B; Schodde, Richard; Johnson, Rebecca N.

Heredity (Edinb) ; 125(3): 167, 2020 Sep.

Article in English | MEDLINE | ID: mdl-32694588

11.

Phylogeography of the iconic Australian red-tailed black-cockatoo (Calyptorhynchus banksii) and implications for its conservation.

Ewart, Kyle M; Lo, Nathan; Ogden, Rob; Joseph, Leo; Ho, Simon Y W; Frankham, Greta J; Eldridge, Mark D B; Schodde, Richard; Johnson, Rebecca N.

Heredity (Edinb) ; 125(3): 85-100, 2020 09.

Article in English | MEDLINE | ID: mdl-32398870

12.

Analysis of Phylogenomic Tree Space Resolves Relationships Among Marsupial Families.

Duchêne, David A; Bragg, Jason G; Duchêne, Sebastián; Neaves, Linda E; Potter, Sally; Moritz, Craig; Johnson, Rebecca N; Ho, Simon Y W; Eldridge, Mark D B.

Syst Biol ; 67(3): 400-412, 2018 May 01.

Article in English | MEDLINE | ID: mdl-29029231

13.

Phylogenetic analysis of the tree-kangaroos (Dendrolagus) reveals multiple divergent lineages within New Guinea.

Eldridge, Mark D B; Potter, Sally; Helgen, Kristofer M; Sinaga, Martua H; Aplin, Ken P; Flannery, Tim F; Johnson, Rebecca N.

Mol Phylogenet Evol ; 127: 589-599, 2018 10.

Article in English | MEDLINE | ID: mdl-29807156

14.

A transcriptome resource for the koala (Phascolarctos cinereus): insights into koala retrovirus transcription and sequence diversity.

Hobbs, Matthew; Pavasovic, Ana; King, Andrew G; Prentis, Peter J; Eldridge, Mark D B; Chen, Zhiliang; Colgan, Donald J; Polkinghorne, Adam; Wilkins, Marc R; Flanagan, Cheyne; Gillett, Amber; Hanger, Jon; Johnson, Rebecca N; Timms, Peter.

BMC Genomics ; 15: 786, 2014 Sep 11.

Article in English | MEDLINE | ID: mdl-25214207

15.

Taxonomic uncertainty and the loss of biodiversity on Christmas Island, Indian Ocean.

Eldridge, Mark D B; Meek, Paul D; Johnson, Rebecca N.

Conserv Biol ; 28(2): 572-9, 2014 Apr.

Article in English | MEDLINE | ID: mdl-24283832

16.

The genome of a globally invasive passerine, the common myna, Acridotheres tristis.

Stuart, Katarina C; Johnson, Rebecca N; Major, Richard E; Atsawawaranunt, Kamolphat; Ewart, Kyle M; Rollins, Lee A; Santure, Anna W; Whibley, Annabel.

DNA Res ; 31(2)2024 Jan 01.

Article in English | MEDLINE | ID: mdl-38366840

17.

Rapid characterization of mitochondrial genome rearrangements in Australian songbirds using next-generation sequencing technology.

Cooke, Georgina M; King, Andrew G; Johnson, Rebecca N; Boles, Walter E; Major, Richard E.

J Hered ; 103(6): 882-6, 2012.

Article in English | MEDLINE | ID: mdl-23125406

18.

Reference genomes for conservation.

Paez, Sadye; Kraus, Robert H S; Shapiro, Beth; Gilbert, M Thomas P; Jarvis, Erich D; Al-Ajli, Farooq Omar; Ceballos, Gerardo; Crawford, Andrew J; Fedrigo, Olivier; Johnson, Rebecca N; Johnson, Warren E; Marques-Bonet, Tomas; Morin, Phillip A; Mueller, Ralf C; Ryder, Oliver A; Teeling, Emma C; Venkatesh, Byrappa.

Science ; 377(6604): 364-366, 2022 07 22.

Article in English | MEDLINE | ID: mdl-35862547

19.

The use of DNA identification in prosecuting wildlife-traffickers in Australia: do the penalties fit the crimes?

Johnson, Rebecca N.

Forensic Sci Med Pathol ; 6(3): 211-6, 2010 Sep.

Article in English | MEDLINE | ID: mdl-20640536

20.

Monsoon-influenced speciation patterns in a species flock of Eophreatoicus Nicholls (Isopoda; Crustacea).

Wilson, George D F; Humphrey, Christopher L; Colgan, Donald J; Gray, Karen-Ann; Johnson, Rebecca N.

Mol Phylogenet Evol ; 51(2): 349-64, 2009 May.

Article in English | MEDLINE | ID: mdl-19233300

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