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1.
Physiol Plant ; 173(3): 1030-1047, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34263457

ABSTRACT

Differences in root morphology and acclimation to low-phosphorus (P) soil were examined among eight legume species from the Trifolium Section Tricocephalum to understand how these root attributes determine P acquisition. Ornithopus sativus was included as a highly P-efficient benchmark species. Plants were grown as microswards in pots with five rates of P supplied in a topsoil layer to mimic uneven P distribution within a field soil profile. Topsoil and subsoil roots were harvested separately to enable measurement of the nutrient-foraging responses. Critical P requirement (lowest P supply for maximum yield) varied over a threefold range, reflecting differences in root morphology and acclimation of nutrient-foraging roots to P stress. Among the species, there was a 3.2-fold range in root length density, a 1.7-fold range in specific root length, and a 2.1-fold range in root hair length. O. sativus had the lowest critical P requirement, displayed a high root length density, the highest specific root length, and the longest root hairs. Acquisition of P from P-deficient soil was facilitated by development of a large root hair cylinder (i.e. a large root-soil interface). This, in turn, was determined by the intrinsic root morphology attributes of each genotype, and the plasticity of its root morphology response to internal P stress. Root acclimation in low-P soil by all species was mostly associated with preferential allocation of mass to nutrient-foraging roots. Only O. sativus and four of the Trifolium species adjusted specific root length beneficially, and only O. sativus increased its root hair length in low-P soil.


Subject(s)
Phosphorus , Trifolium , Acclimatization , Plant Roots , Soil
2.
Australas J Dermatol ; 62(3): 314-322, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34080683

ABSTRACT

BACKGROUND: The BIOCHIP is an indirect immunofluorescence diagnostic investigation which identifies multiple autoantibodies with a mosaic panel of target antigen-specific substrates in a single incubation field. The EUROIMMUN Dermatology Profile ELISA allows simultaneous investigation of the six most important autoantibodies in bullous autoimmune dermatoses. Evaluation of the BIOCHIP Mosaic 7, compared to that of the EUROIMMUN Dermatology Profile ELISA, when used as a diagnostic investigation in pemphigus and pemphigoid, was undertaken in an Australian cohort. METHODS: The serum of 27 patients was analysed including patients with pemphigus vulgaris (n = 10), pemphigus foliaceous (n = 4), bullous pemphigoid (n = 8), mucous membrane pemphigoid (n = 3) and negative controls (n = 2). Results of the BIOCHIP were compared with the EUROIMMUN Dermatology Profile ELISA, as well as with histology, direct immunofluorescence and indirect immunofluorescence. RESULTS: In pemphigus vulgaris, sensitivity & specificity for the BIOCHIP Mosaic 7 were 100% and 94.1%, comparable to that of the EUROIMMUN Dermatology Profile ELISA with 80% sensitivity and 100% specificity. In bullous pemphigoid, sensitivity of the BIOCHIP was 87.5% and sensitivity of the EUROIMMUN Dermatology ELISA profile was 75%, whilst specificities for both diagnostic methods were 100% in our limited cohort. There was substantial or almost perfect concordance between the BIOCHIP Mosaic 7 and EUROIMMUN Dermatology Profile ELISA for pemphigus vulgaris and bullous pemphigoid. CONCLUSION: The BIOCHIP Mosaic 7 is a rapid, reliable diagnostic investigation in pemphigus and bullous pemphigoid. Results indicate it is comparable to the EUROIMMUN Dermatology Profile ELISA, whilst also providing additional testing with salt split skin, on one field.


Subject(s)
Enzyme-Linked Immunosorbent Assay/methods , Pemphigoid, Bullous/diagnosis , Skin Diseases, Vesiculobullous/diagnosis , Adult , Antibodies, Viral/blood , Australia , Autoantibodies/blood , Female , Humans , Male , Middle Aged , Pemphigoid, Bullous/pathology , Skin Diseases, Vesiculobullous/pathology
3.
Nano Lett ; 15(10): 7002-5, 2015 Oct 14.
Article in English | MEDLINE | ID: mdl-26422057

ABSTRACT

The Stochastic Variational Method (SVM) is used to show that the effective mass model correctly estimates the binding energies of excitons and trions but fails to predict the experimental binding energy of the biexciton. Using high-accuracy variational calculations, it is demonstrated that the biexciton binding energy in transition metal dichalcogenides is smaller than the trion binding energy, contradicting experimental findings. It is also shown that the biexciton has bound excited states and that the binding energy of the L = 0 excited state is in very good agreement with experimental data. This excited state corresponds to a hole attached to a negative trion and may be a possible resolution of the discrepancy between theory and experiment.


Subject(s)
Chalcogens/chemistry , Transition Elements/chemistry
4.
Surg Res Pract ; 2022: 2122956, 2022.
Article in English | MEDLINE | ID: mdl-35299587

ABSTRACT

Background: The anterolateral thigh (ALT) flap has been amongst the most versatile components of the reconstructive surgeon's armamentarium. The authors utilise these flaps for a variety of reconstructive procedures including lower limb reconstruction; postsarcoma excision; and open fractures. Few studies have discussed the extent of recipient site morbidity and subsequent revisional procedures. We will report our experience of the ALT flap in 92 consecutive reconstructions with focus on recipient site complications and revisional procedures. Methods: Retrospective data collection was done from 92 patients who underwent ALT flap reconstruction-for various large soft tissue defects-at our unit at the Royal Free Hospital, London. We evaluated primary recipient site complications and the requirements for secondary operations after flap transfer. Results: All flaps survived with the exception of 3 cases (97% survival rate) in which irreversible venous thrombosis was encountered. 16 of 92 patients (17%) required a second recipient site operation for the following: 7 patients experienced major recipient site complications that warranted early return to theatre and 9 patients required a secondary revision thinning procedure(s). 8 of the 16 patients (50%) requiring second operations had construction on their lower leg/ankle/feet (p value = 0.10). Conclusions: Our data demonstrated effective use of the ALT flap in the management of soft tissue reconstructive surgery. Partial flap necrosis was the main complication at the recipient site. In future work, secondary thinning procedures, particularly at the ankle/foot, should be separated from flap-specific complications. Furthermore, we demonstrate tailoring ALT thickness can be performed safely without compromising flap viability.

5.
Alzheimers Dement ; 7(4): 386-395.e6, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21784349

ABSTRACT

BACKGROUND: The cerebrospinal fluid (CSF) biomarkers amyloid ß (Aß)-42, total-tau (T-tau), and phosphorylated-tau (P-tau) demonstrate good diagnostic accuracy for Alzheimer's disease (AD). However, there are large variations in biomarker measurements between studies, and between and within laboratories. The Alzheimer's Association has initiated a global quality control program to estimate and monitor variability of measurements, quantify batch-to-batch assay variations, and identify sources of variability. In this article, we present the results from the first two rounds of the program. METHODS: The program is open for laboratories using commercially available kits for Aß, T-tau, or P-tau. CSF samples (aliquots of pooled CSF) are sent for analysis several times a year from the Clinical Neurochemistry Laboratory at the Mölndal campus of the University of Gothenburg, Sweden. Each round consists of three quality control samples. RESULTS: Forty laboratories participated. Twenty-six used INNOTEST enzyme-linked immunosorbent assay kits, 14 used Luminex xMAP with the INNO-BIA AlzBio3 kit (both measure Aß-(1-42), P-tau(181P), and T-tau), and 5 used Meso Scale Discovery with the Aß triplex (AßN-42, AßN-40, and AßN-38) or T-tau kits. The total coefficients of variation between the laboratories were 13% to 36%. Five laboratories analyzed the samples six times on different occasions. Within-laboratory precisions differed considerably between biomarkers within individual laboratories. CONCLUSIONS: Measurements of CSF AD biomarkers show large between-laboratory variability, likely caused by factors related to analytical procedures and the analytical kits. Standardization of laboratory procedures and efforts by kit vendors to increase kit performance might lower variability, and will likely increase the usefulness of CSF AD biomarkers.


Subject(s)
Alzheimer Disease/cerebrospinal fluid , Alzheimer Disease/diagnosis , Biomarkers/cerebrospinal fluid , Quality Control , Amyloid beta-Peptides/cerebrospinal fluid , Biological Assay/methods , Enzyme-Linked Immunosorbent Assay , Humans , Peptide Fragments/cerebrospinal fluid , Phosphorylation , Reproducibility of Results , Sweden , Time Factors , tau Proteins/cerebrospinal fluid
6.
JPRAS Open ; 29: 167-177, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34258366

ABSTRACT

INTRODUCTION: Plastic surgery is a dynamic and evolving field but remains poorly understood due to lack of knowledge, media misconceptions and recent changes to medical undergraduate curricula. To address issues around student interest and recruitment into the speciality, it is imperative to understand the factors influencing medical students and future clinicians. AIMS: To examine influences, interest and perceptions of plastic surgery amongst Scottish medical students and explore methods to increase undergraduate engagement. METHOD: Cross-sectional survey distributed online via Scottish undergraduate medical school offices comprising 6 domains: demographics; career interest; perceptions, interests and influences in plastic surgery; curriculum and trainer views; understanding the role of a plastic surgeon; and undergraduate engagement. RESULTS: A total of 193 students responded with no statistically significant relationship between year group, gender, and interest in plastic surgery. Phrases most strongly identified with plastic surgery included private practice, reconstruction and cosmetics. Placements, teaching staff and workshops/courses were found to influence perception of plastic surgery. Fortunately, only 6% of students encountered antagonism towards plastic surgery encompassing themes of negative stereotypes of surgeons and connotations surrounding cosmetic surgery. Importantly, many students were largely unaware of the range of common procedures undertaken by plastic surgeons. To overcome this lack of awareness and generate greater interest, students suggested greater plastics exposure, consultant-led teaching and workshops showcasing the specialty. CONCLUSION: Medical students want varied, stimulating and flexible careers - something which plastic surgery can provide. However it seems the understanding of the scope of plastic surgery is poorly understood amongs future trainees. To increase uptake and interest, negative perceptions need to be addressed and greater engagement is required from medical school upwards.

7.
Phys Rev E ; 100(5-1): 053301, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31869973

ABSTRACT

The coupled Maxwell and time-dependent Kohn-Sham equations are solved using the Riemann-Silberstein vectors to represent the electromagnetic fields. Momentum-space time propagation of the Riemann-Silberstein vectors are proposed and test calculations are presented to show the accuracy of the approach.

8.
Sci Rep ; 8(1): 768, 2018 01 15.
Article in English | MEDLINE | ID: mdl-29335642

ABSTRACT

We report a combined theoretical/experimental study of dynamic screening of excitons in media with frequency-dependent dielectric functions. We develop an analytical model showing that interparticle interactions in an exciton are screened in the range of frequencies from zero to the characteristic binding energy depending on the symmetries and transition energies of that exciton. The problem of the dynamic screening is then reduced to simply solving the Schrodinger equation with an effectively frequency-independent potential. Quantitative predictions of the model are experimentally verified using a test system: neutral, charged and defect-bound excitons in two-dimensional monolayer WS2, screened by metallic, liquid, and semiconducting environments. The screening-induced shifts of the excitonic peaks in photoluminescence spectra are in good agreement with our model.

9.
Sci Rep ; 8(1): 6093, 2018 Apr 12.
Article in English | MEDLINE | ID: mdl-29650985

ABSTRACT

A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper.

10.
Phys Rev E ; 96(6-1): 063307, 2017 Dec.
Article in English | MEDLINE | ID: mdl-29347324

ABSTRACT

The integrating factor and exponential time differencing methods are implemented and tested for solving the time-dependent Kohn-Sham equations. Popular time propagation methods used in physics, as well as other robust numerical approaches, are compared to these exponential integrator methods in order to judge the relative merit of the computational schemes. We determine an improvement in accuracy of multiple orders of magnitude when describing dynamics driven primarily by a nonlinear potential. For cases of dynamics driven by a time-dependent external potential, the accuracy of the exponential integrator methods are less enhanced but still match or outperform the best of the conventional methods tested.

11.
Funct Plant Biol ; 44(5): 552-562, 2017 May.
Article in English | MEDLINE | ID: mdl-32480587

ABSTRACT

Root traits related to phosphorus (P) acquisition are used to make inferences about a species' P-foraging ability under glasshouse conditions. However, the effect on such root traits of constrained canopy spread, as occurs in dense pasture swards, is unknown. We grew micro-swards of Trifolium subterraneum L. and Ornithopus compressus L. at 15 and 60mg kg-1 soil P in a glasshouse. Shoots either spread beyond the pot perimeter or were constrained by a cylindrical sleeve adjusted to canopy height. After 8 weeks, shoot and root dry mass (DM), shoot tissue P concentration, rhizosphere carboxylates, arbuscular mycorrhizal (AM) fungal colonisation, total and specific root length (TRL and SRL respectively), average root diameter (ARD) and average root hair length (ARHL) were measured. In all species and treatments, constrained canopy spread decreased root DM (39-59%), TRL (27-45%) and shoot DM (10-28%), and increased SRL (20-33%), but did not affect ARD, ARHL and AM fungal colonisation. However, shoot P concentration and content increased, and rhizosphere carboxylates increased 3.5 to 12-fold per unit RL and 2.0- to 6.5-fold per micro-sward. Greater amounts of rhizosphere carboxylates when canopy spread was constrained appeared to compensate for reduced root growth enabling shoot P content to be maintained.

12.
Funct Plant Biol ; 43(9): 815-826, 2016 Sep.
Article in English | MEDLINE | ID: mdl-32480506

ABSTRACT

Annual pasture legume species can vary more than 3-fold in their critical external phosphorus (P) requirement (i.e. P required for 90% of maximum yield). In this work we investigated the link between root morphology, P acquisition and critical external P requirement among pasture species. The root morphology acclimation of five annual pasture legumes and one grass species to low soil P availability was assessed in a controlled-environment study. The critical external P requirement of the species was low (Dactylis glomerata L., Ornithopus compressus L., Ornithopus sativus Brot.), intermediate (Biserrula pelecinus L., Trifolium hirtum All.) or high (Trifolium subterraneum L.). Root hair cylinder volumes (a function of root length, root hair length and average root diameter) were estimated in order to assess soil exploration and its impact on P uptake. Most species increased soil exploration in response to rates of P supply near or below their critical external P requirement. The legumes differed in how they achieved their maximum root hair cylinder volume. The main variables were high root length density, long root hairs and/or high specific root length. However, total P uptake per unit surface area of the root hair cylinder was similar for all species at rates of P supply below critical P. Species that maximised soil exploration by root morphology acclimation were able to prolong access to P in moderately P-deficient soil. However, among the species studied, it was those with an intrinsic capacity for a high root-hair-cylinder surface area (i.e. long roots and long root hairs) that achieved the lowest critical P requirement.

13.
Cell Signal ; 14(6): 529-36, 2002 Jun.
Article in English | MEDLINE | ID: mdl-11897493

ABSTRACT

Proteins coimmunoprecipitating with protein kinase C (PKC) epsilon in fibroblasts were identified through matrix-assisted laser desorption/ionisation time of flight mass spectrometry (MALDI TOF m/s). This method identified myosin IIA in PKC epsilon immunoprecipitates, as well as known PKC epsilon binding proteins, actin, beta'Cop and cytokeratin. Myosin is not a substrate for PKC epsilon. Immunofluorescence analysis showed that PKC epsilon is colocalised with actin and myosin in actomyosin stress fibers in fibroblasts. Inhibitors of PKC and myosin ATPase activity, as well as microfilament-disrupting drugs, all inhibited spreading of fibroblasts after passage, suggesting a role for a PKC epsilon-actin-myosin complex in cell spreading.


Subject(s)
Actins/metabolism , Fibroblasts/enzymology , Fibroblasts/metabolism , Isoenzymes/metabolism , Nonmuscle Myosin Type IIA/metabolism , Protein Kinase C/metabolism , 3T3 Cells , Actins/analysis , Animals , Cell Adhesion , Cell Line , Enzyme Inhibitors/pharmacology , Fibroblasts/ultrastructure , Fluorescent Antibody Technique , Isoenzymes/analysis , Isoenzymes/antagonists & inhibitors , Mice , Nonmuscle Myosin Type IIA/analysis , Phosphorylation , Precipitin Tests , Protein Kinase C/analysis , Protein Kinase C/antagonists & inhibitors , Protein Kinase C-epsilon , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Stress Fibers/chemistry , Stress Fibers/ultrastructure
14.
Biomark Med ; 6(4): 409-17, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22917143

ABSTRACT

Cerebrospinal fluid (CSF) biomarkers for Alzheimer's disease (AD) are increasingly used in clinical settings, research and drug trials. However, their broad-scale use on different technology platforms is hampered by the lack of standardization at the level of sample handling, determination of concentrations of analytes and the absence of well-defined performance criteria for in vitro diagnostic or companion diagnostic assays, which influences the apparent concentration of the analytes measured and the subsequent interpretation of the data. There is a need for harmonization of CSF AD biomarker assays that can reliably, across centers, quantitate CSF biomarkers with high analytical precision, selectivity and stability over long time periods. In this position paper, we discuss reference procedures for the measurement of CSF AD biomarkers, especially amyloid ß42 and tau. We describe possible technical approaches, focusing on a selected reaction monitoring mass spectrometry assay as a candidate reference method for quantification of CSF amyloid ß42.


Subject(s)
Alzheimer Disease/diagnosis , Amyloid beta-Peptides/cerebrospinal fluid , Peptide Fragments/cerebrospinal fluid , Research Design/standards , Alzheimer Disease/metabolism , Alzheimer Disease/pathology , Amyloid beta-Peptides/standards , Biomarkers/cerebrospinal fluid , Chromatography, High Pressure Liquid/standards , Enzyme-Linked Immunosorbent Assay/standards , Humans , Peptide Fragments/standards , Tandem Mass Spectrometry/standards , tau Proteins/cerebrospinal fluid
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