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1.
J Am Chem Soc ; 136(22): 8138-42, 2014 Jun 04.
Article in English | MEDLINE | ID: mdl-24815880

ABSTRACT

An enantioselective method for Pd(II)-catalyzed cross-coupling of methylene ß-C(sp(3))-H bonds in cyclobutanecarboxylic acid derivatives with arylboron reagents is described. High yields and enantioselectivities were achieved through the development of chiral mono-N-protected α-amino-O-methylhydroxamic acid (MPAHA) ligands, which form a chiral complex with the Pd(II) center. This reaction provides an alternative approach to the enantioselective synthesis of cyclobutanecarboxylates containing α-chiral quaternary stereocenters. This new class of chiral catalysts also show promises for enantioselective ß-C(sp(3))-H activation of acyclic amides.


Subject(s)
Hydroxamic Acids/chemistry , Palladium/chemistry , Amides/chemistry , Boron Compounds/chemistry , Catalysis , Cyclobutanes/chemistry , Ligands , Stereoisomerism
2.
J Am Chem Soc ; 133(49): 19598-601, 2011 Dec 14.
Article in English | MEDLINE | ID: mdl-22059375

ABSTRACT

Systematic ligand development has led to the identification of novel mono-N-protected amino acid ligands for Pd(II)-catalyzed enantioselective C-H activation of cyclopropanes. A diverse range of organoboron reagents can be used as coupling partners, and the reaction proceeds under mild conditions. These results provide a new retrosynthetic disconnection for the construction of enantioenriched cis-substituted cyclopropanecarboxylic acids.


Subject(s)
Cyclopropanes/chemistry , Palladium/chemistry , Amino Acids/chemistry , Catalysis , Cyclopropanes/chemical synthesis , Ligands
3.
J Org Chem ; 76(4): 1013-30, 2011 Feb 18.
Article in English | MEDLINE | ID: mdl-21250718

ABSTRACT

A sweeping structural revision of the sarcodonin natural product family (published structures 1a-13a) is proposed after extensive studies aimed at their chemical synthesis. Key features of revised structure 1b include replacement of the N,N-dioxide moiety with an oxime, ring-opening of the central diketopiperazine, and transposition of the terphenyl wing from the 1ß-2ß position of 1a to the 2ß-3ß position of 1b. This structure revision arose from the serendipitous synthesis of a benzodioxane aminal (44) whose structure was unambiguously determined by X-ray crystallography and whose spectral properties bore considerable resemblance to the published data for the sarcodonins. A versatile new method for O-arylation of hydroxamic acids is also reported herein, as well as a manganese(III)-mediated α-oxidation of hydroxamic acids to aminals.


Subject(s)
Biological Products/chemistry , Terpenes/chemistry , Crystallography, X-Ray , Molecular Structure , Oxidation-Reduction , Stereoisomerism
4.
J Med Chem ; 63(22): 13561-13577, 2020 11 25.
Article in English | MEDLINE | ID: mdl-32787094

ABSTRACT

Tyrosine kinase 2 (TYK2) is a member of the JAK kinase family that regulates signal transduction downstream of receptors for the IL-23/IL-12 pathways and type I interferon family, where it pairs with JAK2 or JAK1, respectively. On the basis of human genetic and emerging clinical data, a selective TYK2 inhibitor provides an opportunity to treat autoimmune diseases delivering a potentially differentiated clinical profile compared to currently approved JAK inhibitors. The discovery of an ATP-competitive pyrazolopyrazinyl series of TYK2 inhibitors was accomplished through computational and structurally enabled design starting from a known kinase hinge binding motif. With understanding of PK/PD relationships, a target profile balancing TYK2 potency and selectivity over off-target JAK2 was established. Lead optimization involved modulating potency, selectivity, and ADME properties which led to the identification of the clinical candidate PF-06826647 (22).


Subject(s)
Autoimmune Diseases/enzymology , Drug Discovery/methods , Protein Kinase Inhibitors/chemistry , Protein Kinase Inhibitors/pharmacology , TYK2 Kinase/antagonists & inhibitors , Animals , Autoimmune Diseases/drug therapy , Humans , Mice , Mice, Transgenic , Microsomes, Liver/drug effects , Microsomes, Liver/enzymology , Protein Kinase Inhibitors/therapeutic use , Protein Structure, Secondary , TYK2 Kinase/chemistry , TYK2 Kinase/metabolism
5.
Surg Endosc ; 23(1): 209-14, 2009 Jan.
Article in English | MEDLINE | ID: mdl-18297349

ABSTRACT

BACKGROUND: This study aimed to define perceptions of the need and the value of new simulation devices for laparoscopic and robot-assisted surgery. The initial experience of surgeons using both robotic and nonrobotic laparoscopic simulators to perform an advanced laparoscopic skill was evaluated. METHODS: At the 2006 Society of American Gastroesophageal Surgeons (SAGES) meeting, 63 Learning Center attendees used a new virtual reality robotic surgery simulator (SEP Robot) and either a computer-enhanced laparoscopic simulator (ProMIS) or a virtual reality simulator (SurgicalSIM). Demographic and training data were collected by an intake survey. Subjects then were assessed during one iteration of laparoscopic suturing and knot-tying on the SEP Robot and either the ProMIS or the SurgicalSIM. A posttask survey determined users' impressions of task realism, interface quality, and educational value. Performance data were collected and comparisons made between user-defined groups, different simulation platforms, and posttask survey responses. RESULTS: The task completion rate was significantly greater for experts than for nonexperts on the virtual reality platforms (SurgicalSIM: 100% vs 36%; SEP Robot: 93% vs 63%; p < 0.05). Prior robot use was predictive of task completion on the SEP Robot, and nonexperts were more likely to complete the virtual reality task on the SEP Robot than on the SurgicalSIM. Experts performed better than nonexperts for all performance measures on the ProMIS. All the survey scores pertaining to realism except image quality were higher for the ProMIS than for either virtual reality trainer. CONCLUSION: The task completion rate was the best discriminant of expert performance on both virtual reality platforms, whereas simulator metrics best discriminated expertise for the videoscopic platform. Similar comparisons for the virtual reality platforms were not feasible because of the low task completion rate for nonexperts. The added degrees of freedom associated with the robotic surgical simulator instruments facilitated completion of the task by nonexperts. All platforms were perceived as effective training tools.


Subject(s)
Computer-Assisted Instruction/instrumentation , General Surgery/education , Laparoscopy , Robotics , Suture Techniques/education , User-Computer Interface , Attitude of Health Personnel , Clinical Competence , Curriculum , Ergonomics , Humans , Motor Skills , Practice, Psychological , Reproducibility of Results
6.
Prostate Cancer Prostatic Dis ; 21(3): 364-372, 2018 09.
Article in English | MEDLINE | ID: mdl-29263420

ABSTRACT

BACKGROUND: Patients with high-risk prostate cancer have an increased likelihood of experiencing a relapse following radical prostatectomy (RP). We previously conducted three neoadjuvant androgen-deprivation therapy (ADT) trials prior to RP in unfavorable intermediate and high-risk disease. METHODS: In this analysis, we report on the post-RP outcomes of a subset of patients enrolled on these studies. We conducted a pooled analysis of patients with available follow-up data treated on three neoadjuvant trials at three institutions. All patients received intense ADT prior to RP. The primary endpoint was time to biochemical recurrence (BCR). BCR was defined as a PSA ≥ 0.2 ng/mL or treatment with radiation or androgen-deprivation therapy for a rising PSA < 0.2 ng/mL. RESULTS: Overall, 72 patients were included of whom the majority had a Gleason score ≥ 8 (n = 46, 63.9%). Following neoadjuvant therapy, 55.7% of patients (n = 39/70) had pT3 disease, 40% (n = 28) had seminal vesicle invasion, 12.9% (n = 9) had positive margins, and 11.4% (n = 8) had lymph node involvement. Overall, 11 (15.7%) had tumor measuring ≤ 0.5 cm, which included four patients (5.7%) with a pathologic complete response and seven (10.0%) with residual tumor measuring 0.1-0.5 cm. Compared to pretreatment clinical staging, 10 patients (14.3%) had pathologic T downstaging at RP. The median follow-up was 3.4 years. Overall, the 3-year BCR-free rate was 70% (95% CI 57%, 90%). Of the 15 patients with either residual tumor ≤ 0.5 cm or pathologic T downstaging, no patient experienced a recurrence. CONCLUSION: In this exploratory pooled clinical trials analysis, we highlight that neoadjuvant therapy prior to RP in unfavorable intermediate and high-risk patients may potentially have a positive impact on recurrence rates. Larger studies with longer follow-up periods are warranted to evaluate the impact of neoadjuvant hormone therapy on pathologic and long-term outcomes.


Subject(s)
Androgen Antagonists/therapeutic use , Kallikreins/blood , Neoadjuvant Therapy/methods , Neoplasm Recurrence, Local/epidemiology , Prostate-Specific Antigen/blood , Prostatic Neoplasms/therapy , Aged , Disease-Free Survival , Follow-Up Studies , Humans , Male , Middle Aged , Multicenter Studies as Topic , Neoplasm Recurrence, Local/blood , Neoplasm Recurrence, Local/prevention & control , Neoplasm Staging , Prostate/pathology , Prostate/surgery , Prostatectomy , Prostatic Neoplasms/blood , Prostatic Neoplasms/mortality , Prostatic Neoplasms/pathology , Randomized Controlled Trials as Topic , Treatment Outcome
7.
J Appl Physiol (1985) ; 92(1): 372-84, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11744680

ABSTRACT

We present a noninvasive method to measure the venous oxygen saturation (Sv(O(2))) in tissues using near-infrared spectroscopy (NIRS). This method is based on the respiration-induced oscillations of the near-infrared absorption in tissues, and we call it spiroximetry (the prefix spiro means respiration). We have tested this method in three piglets (hind leg) and in eight human subjects (vastus medialis and vastus lateralis muscles). In the piglet study, we compared our NIRS measurements of the Sv(O(2)) (Sv(O(2))-NIRS(resp)) with the Sv(O(2)) of blood samples. Sv(O(2))-NIRS(resp) and Sv(O(2)) of blood samples agreed well over the whole range of Sv(O(2)) considered (20-95%). The two measurements showed an average difference of 1.0% and a standard deviation of the difference of 5.8%. In the human study, we found a good agreement between Sv(O(2))-NIRS(resp) and the Sv(O(2)) values measured with the NIRS venous occlusion method. Finally, in a preliminary test involving muscle exercise, Sv(O(2))-NIRS(resp) showed an expected postexercise decrease from the initial baseline value and a subsequent recovery to baseline.


Subject(s)
Oximetry/methods , Oxygen/blood , Spirometry/methods , Adult , Algorithms , Animals , Exercise/physiology , Female , Hindlimb/blood supply , Humans , Male , Regional Blood Flow/physiology , Spectroscopy, Near-Infrared , Swine
8.
Org Lett ; 15(9): 2080-3, 2013 May 03.
Article in English | MEDLINE | ID: mdl-23577748

ABSTRACT

The first synthesis of members of the sarcodonin family, phellodonin and sarcodonin ε, is reported herein. This verifies that the unprecedented and seemingly unstable N,N-dioxide-containing benzodioxazine framework can be constructed in the laboratory and lends further support to the proposed structures. The key step in the synthesis involves a biomimetic hetero-Diels-Alder reaction between a pyrazine N-oxide and an ortho-quinone.


Subject(s)
Cyclic N-Oxides/chemistry , Pyrazines/chemistry , Quinones/chemistry , Terpenes/chemical synthesis , Molecular Conformation , Molecular Structure , Stereoisomerism , Terpenes/chemistry
10.
J Am Chem Soc ; 129(42): 12857-69, 2007 Oct 24.
Article in English | MEDLINE | ID: mdl-17900115

ABSTRACT

Full details are provided for a recently invented method to couple indoles and pyrroles to carbonyl compounds. The reaction is ideally suited for structurally complex substrates and exhibits high levels of chemoselectivity (functional group tolerability), regioselectivity (coupling occurs exclusively at C-3 of indole or C-2 of pyrrole), stereoselectivity (substrate control), and practicality (amenable to scaleup). In addition, quaternary stereocenters are easily and predictably generated. The reaction has been applied to a number of synthetic problems including total syntheses of members of the hapalindole family of natural products, ketorolac, acremoauxin A, and oxazinin 3. Mechanistically, this coupling protocol appears to operate by a single electron-transfer process requiring generation of an electron-deficient radical adjacent to a carbonyl which is then intercepted by an indole or pyrrole anion.


Subject(s)
Carbon/chemistry , Indoles/chemistry , Morpholines/chemical synthesis , Oxazines/chemistry , Pyrroles/chemistry , Chemistry, Organic/methods , Dimerization , Electrons , Indoles/chemical synthesis , Ketorolac/chemistry , Models, Chemical , Molecular Conformation , Oxygen/chemistry , Phosphines/chemistry , Stereoisomerism
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