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1.
Virol J ; 21(1): 136, 2024 Jun 12.
Article in English | MEDLINE | ID: mdl-38867299

ABSTRACT

BACKGROUND: Hepatitis E is a potentially serious infection in organ recipients, with an estimated two-thirds of cases becoming chronic, and with a subsequent risk of cirrhosis and death. In Europe, transmission occurs most often through the consumption of raw or undercooked pork, more rarely through blood transfusion, but also after solid organ transplantation. Here we describe a case of Hepatitis E virus (HEV) infection transmitted following kidney transplantation and review the literature describing cases of HEV infection transmitted by solid organ transplantation. CASE PRESENTATION: Three weeks after kidney transplantation, the patient presented with an isolated minimal increase in GGT and hepatic cytolysis 6 months later, leading to the diagnosis of genotype 3c hepatitis E, with a plasma viral load of 6.5 log10IU/mL. In retrospect, HEV RNA was detected in the patient's serum from the onset of hepatitis, and in the donor's serum on the day of donation, with 100% identity between the viral sequences, confirming donor-derived HEV infection. Hepatitis E had a chronic course, was treated by ribavirin, and relapsed 10 months after the end of treatment. DISCUSSION: Seven cases of transmission of HEV by solid organ transplantation have been described since 2012 without systematic screening for donors, all diagnosed at the chronic infection stage; two patients died. HEV organ donor transmission may be underestimated and there is insufficient focus on immunocompromised patients in whom mild liver function test impairment is potentially related to hepatitis E. However, since HEV infection is potentially severe in these patients, and as evidence accumulates, we believe that systematic screening of organ donors should be implemented for deceased and living donors regardless of liver function abnormalities, as is already the case in the UK and Spain. In January 2024, the French regulatory agency of transplantation has implemented mandatory screening of organ donors for HEV RNA.


Subject(s)
Hepatitis E virus , Hepatitis E , Kidney Transplantation , Tissue Donors , Hepatitis E/transmission , Hepatitis E/diagnosis , Hepatitis E/virology , Humans , Kidney Transplantation/adverse effects , Hepatitis E virus/genetics , Hepatitis E virus/isolation & purification , France , Male , RNA, Viral/genetics , Middle Aged , Genotype , Viral Load , Antiviral Agents/therapeutic use
2.
J Med Virol ; 90(10): 1559-1567, 2018 10.
Article in English | MEDLINE | ID: mdl-29797570

ABSTRACT

Primary HIV-1 infections (PHI) with non-B subtypes are increasing in developed countries while transmission of HIV-1 harboring antiretroviral resistance-associated mutations (RAMs) remains a concern. This study assessed non-B HIV-1 subtypes and RAMs prevalence among patients with PHI in university hospitals of Marseille, Southeastern France, in 2005-2015 (11 years). HIV-1 sequences were obtained by in-house protocols from 115 patients with PHI, including 38 for the 2013-2015 period. On the basis of the phylogenetic analysis of the reverse transcriptase region, non-B subtypes were identified in 31% of these patients. They included 3 different subtypes (3A, 1C, 4F), 23 circulating recombinant forms (CRFs) (CRF02_AG, best BLAST hits being CRF 36_cpx and CRF30 in 7 and 1 cases, respectively), and 5 unclassified sequences (U). Non-B subtypes proportion increased significantly, particularly in 2011-2013 vs in 2005-2010 (P = .03). CRF02_AG viruses largely predominated in 2005-2013 whereas atypical strains more difficult to classify and undetermined recombinants emerged recently (2014-2015). The prevalence of protease, nucleos(t)ide reverse transcriptase, and first-generation nonnucleoside reverse transcriptase inhibitors-associated RAMs were 1.7% (World Health Organization [WHO] list, 2009/2.6% International AIDS Society [IAS] list, 2017), 5.2%/4.3%, and 5.2%/5.2%, respectively. Etravirine/rilpivirine-associated RAM (IAS) prevalence was 4.3%. Men who have sex with men (MSM) were more frequently infected with drug-resistant viruses than other patients (26% vs 7%; P = .011). The recent increase of these rare HIV-1 strains and the spread of drug-resistant HIV-1 among MSM in Southeastern France might be considered when implementing prevention strategies and starting therapies.


Subject(s)
Drug Resistance, Viral , Genotype , HIV Infections/epidemiology , HIV Infections/virology , HIV-1/classification , HIV-1/drug effects , Adult , Anti-HIV Agents/pharmacology , Female , France/epidemiology , HIV-1/genetics , HIV-1/isolation & purification , Humans , Male , Middle Aged , Mutation , Prevalence , Recombination, Genetic , Sequence Analysis, DNA
3.
J Med Virol ; 88(5): 828-36, 2016 May.
Article in English | MEDLINE | ID: mdl-26439319

ABSTRACT

Hepatitis B virus (HBV) infection is a public health problem. In France, 0.68% of adults are chronically infected. We aimed to describe the epidemiological, virological and clinical characteristics of HBV infections newly diagnosed in 2011 in University hospitals of Marseille, the second largest French city. HBV serology was performed for 18,130 sera from 15,744 patients. A total of 167 patients were newly-diagnosed with HBV based upon the detection of hepatitis B surface antigen and anti-hepatitis B core antibodies. Clinico-epidemiological features were analyzed for 78 patients. Patients included a majority of men (59%), women being significantly younger with a mean age of 36 ± 17 versus 43.5 ± 16.2 years (P = 0.009). Country of birth was available for 52 patients and 35% of them originated from sub-Saharan Africa. Levels of the liver biological parameters were significantly lower in women compared to men, in whom mean alanine aminotransferase and gammaglutamyl transferase levels were 24 ± 39 versus 37 ± 36 IU/l (P = 0.0001) and 20 ± 20 versus 51 ± 53 IU/l (P = 0.0001), respectively. Co-infections with hepatitis C and human immunodeficiency viruses were found in 5% and 6% of the patients, respectively. HBV DNA was detectable in 90% of the HBeAg-negative patients. In addition, there was a positive correlation between the HBsAg titer and the HBV DNA level (P = 0.001). Genotype D was the most common HBV genotype and was found in 53% of the patients tested, followed by genotype E (21%). HBV remains a major concern with a slightly greater number of new diagnoses than in 2004. HBV genetic diversity was substantial in the present cohort.


Subject(s)
Hepatitis B virus/classification , Hepatitis B virus/genetics , Hepatitis B, Chronic/epidemiology , Hepatitis B, Chronic/pathology , Adolescent , Adult , Age Distribution , Aged , Aged, 80 and over , Alanine Transaminase/blood , Child , Child, Preschool , Coinfection/epidemiology , Ethnicity , Female , France/epidemiology , Genotype , HIV Infections/complications , HIV Infections/epidemiology , Hepatitis B Antibodies/blood , Hepatitis B Surface Antigens/blood , Hepatitis B virus/isolation & purification , Hepatitis B, Chronic/complications , Hepatitis B, Chronic/virology , Hepatitis C/complications , Hepatitis C/epidemiology , Hospitals, University , Humans , Infant , Male , Middle Aged , Retrospective Studies , Young Adult , gamma-Glutamyltransferase/blood
4.
J Clin Microbiol ; 53(5): 1523-30, 2015 May.
Article in English | MEDLINE | ID: mdl-25694530

ABSTRACT

Hepatitis E virus (HEV) genotype 3 is endemic in Europe and hyperendemic in southern France. Recent reports of a high prevalence of HEV RNA in blood donations and in culinary specialties from this geographical area confirmed the endemicity of HEV and sources of viral transmission in this geographical area. HEV causes acute and chronic hepatitis in solid organ transplant recipients. Since March 2012, we have implemented systematic HEV serological testing in our cohort of kidney transplant recipients (KTRs) in Marseille in southeastern France. The aim of our study was to assess HEV exposure in this cohort between March 2012 and May 2014. During these 27 months, we found that 39% of the patients who underwent kidney transplantation had an anti-HEV IgG response using a sensitive microplate enzyme immunoassay. This seroprevalence was approximately 43% at both 1 and 8 years after, using the same assay. In addition, systematic HEV serological testing detected 6 cases of HEV infection among 578 KTRs (1%) during the 27 months of the study, with 5 at an acute stage and 1 at a chronic stage. In conclusion, continuous HEV monitoring in this population is useful for better understanding the epidemiology of HEV in France, because these patients are a well-monitored population. Moreover, HEV monitoring in KTRs is clinically relevant because HEV represents a clinical threat in these patients. Nevertheless, HEV serological testing may be more fruitful for identifying HEV infections when performed in cases of biological liver abnormalities than when performed systematically.


Subject(s)
Antibodies, Viral/blood , Hepatitis E virus/immunology , Hepatitis E/epidemiology , Kidney Transplantation/adverse effects , Mass Screening/methods , Transplant Recipients , Adolescent , Adult , Aged , Aged, 80 and over , Cohort Studies , Enzyme-Linked Immunosorbent Assay , Female , France/epidemiology , Hepatitis E/diagnosis , Humans , Immunoglobulin G/blood , Male , Middle Aged , Seroepidemiologic Studies , Young Adult
5.
J Med Virol ; 87(11): 1921-33, 2015 Nov.
Article in English | MEDLINE | ID: mdl-25959702

ABSTRACT

Infection with hepatitis C virus (HCV) represents a major public health concern worldwide. Recent therapeutic advances have been considerable, HCV genotype continuing to guide therapeutic management. Since 2008, HCV genotyping in our clinical microbiology laboratory at university hospitals of Marseille, Southeastern France, has been based on NS3 protease gene population sequencing, to allow concurrent HCV genotype and protease inhibitor (PI) genotypic resistance determinations. We aimed, first, to analyze the genetic diversity of HCV NS3 protease obtained from blood samples collected between 2003 and 2013 from patients monitored at university hospitals of Marseille and detect possible atypical sequences; and, second, to identify NS3 protease amino acid patterns associated with decreased susceptibility to HCV PIs. A total of 1,213 HCV NS3 protease sequences were available in our laboratory sequence database. We implemented a strategy based on bioinformatic tools to determine whether HCV sequences are representative of our local HCV genetic diversity, or divergent. In our 2003-2012 HCV NS3 protease sequence database, we delineated 32 clusters representative of the majority HCV genetic diversity, and 61 divergent sequences. Five of these divergent sequences showed less than 85% nucleotide identity with their top GenBank hit. In addition, among the 294 sequences obtained in 2013, three were divergent relative to these 32 previously delineated clusters. Finally, we detected both natural and on-treatment genotypic resistance to HCV NS3 PIs, including a substantial prevalence of Q80K substitutions associated with decreased susceptibility to simeprevir, a second generation PI.


Subject(s)
Genetic Variation , Genotype , Hepacivirus/genetics , Hepatitis C/virology , Viral Nonstructural Proteins/genetics , Cluster Analysis , Drug Resistance, Viral , Female , France , Genotyping Techniques , Hepacivirus/isolation & purification , Hospitals, University , Humans , Male , Middle Aged , Molecular Sequence Data , Mutation, Missense , Phylogeny , Sequence Analysis, DNA , Sequence Homology
6.
Intervirology ; 58(1): 6-13, 2015.
Article in English | MEDLINE | ID: mdl-25592333

ABSTRACT

The rate of eradication of chronic hepatitis C considerably increases with direct-acting antiviral agents, particularly hepatitis C virus (HCV) polymerase inhibitors. While implementing full-length HCV NS5B polymerase sequencing in our clinical microbiology laboratory, we identified atypical HCV sequences, classified as subtype 2l, from 2 patients. HCV-2l NS5B polymerase sequences were detected from 5 and 14 additional patients by screening our laboratory hepatitis virus sequence database and the NCBI GenBank sequence database. Phylogenetic analyses show unambiguously that all HCV-2l sequences are clustered apart from HCV 2 non-l sequences, which compose a second cluster. Mean (±SD) nucleotide identity between near full-length NS5B fragments of subtype 2l was 93.4 ± 0.8% (range: 92.4-95.1). Of note, all HCV-2l sequences obtained in our laboratory and in other centers were from serum samples collected in France. Analysis of the HCV-2l NS5B polymerase amino acid sequences at 30 positions critical for interaction with or resistance to HCV polymerase inhibitors showed specific patterns.


Subject(s)
Hepacivirus/genetics , Hepatitis C, Chronic/virology , RNA-Dependent RNA Polymerase/genetics , Viral Nonstructural Proteins/genetics , Adult , Aged, 80 and over , Amino Acid Sequence , Base Sequence , Databases, Nucleic Acid , Female , France , Genome, Viral , Genotype , Hepacivirus/classification , Humans , Male , Middle Aged , Phylogeny , RNA, Viral/genetics , RNA-Dependent RNA Polymerase/classification , Sequence Analysis, DNA , Viral Nonstructural Proteins/classification
7.
J Med Virol ; 86(11): 1868-76, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25052594

ABSTRACT

Telaprevir and boceprevir, the two first hepatitis C virus (HCV) NS3 protease inhibitors (PIs), considerably increase rates of sustained virologic response in association with pegylated interferon and ribavirin in chronic HCV genotype 1 infections. The 30 first patients treated by telaprevir or boceprevir including anti-HCV therapies since 2011 in Marseille University hospitals, France, were monitored. HCV loads and plasmatic concentrations of telaprevir and boceprevir were determined on sequential blood samples. HCV NS3 protease gene population sequencing was performed at baseline of treatment and in case of treatment failure. Fifteen patients (including 7 co-infected with HIV) received telaprevir and the other 15 patients (including 4 co-infected with HIV) received boceprevir. At baseline, HCV NS3 protease from six patients harbored amino acid substitutions associated with PI-resistance. Treatment failure occurred at week 12 for 7 patients. Amino acid substitutions associated with PI-resistance were observed in six of these cases. HCV NS3 R155K and T54A/S mutants, all of genotype 1a, were found from four patients. Median (interquartile range) plasma concentrations were 3,092 ng/ml (2,320-3,525) for telaprevir and 486 ng/ml (265-619) for boceprevir. For HIV-HCV co-infected patients, median concentrations were 3,162 ng/ml (2,270-4,232) for telaprevir and 374 ng/ml (229-519) for boceprevir. Plasma drug concentration monitoring revealed undetectable concentrations for two patients at week 4, and probable non-adherence to therapy for another patient. These findings indicate that routine HCV NS3 protease sequencing and plasma PI concentration monitoring might be helpful to characterize cases of therapy failure, at a cost dramatically low compared to that of anti-HCV therapy.


Subject(s)
Antiviral Agents/therapeutic use , Hepatitis C, Chronic/drug therapy , Hepatitis C, Chronic/virology , Oligopeptides/therapeutic use , Proline/analogs & derivatives , Viral Nonstructural Proteins/genetics , Adult , Amino Acid Substitution , Antiviral Agents/pharmacokinetics , Drug Resistance, Viral , Drug Therapy, Combination/methods , Female , France , Genotype , Hepacivirus/isolation & purification , Hospitals, University , Humans , Interferon-alpha/therapeutic use , Male , Middle Aged , Mutation, Missense , Oligopeptides/pharmacokinetics , Plasma/chemistry , Proline/pharmacokinetics , Proline/therapeutic use , Ribavirin/therapeutic use , Treatment Failure , Viral Load , Young Adult
8.
Intervirology ; 57(1): 43-8, 2014.
Article in English | MEDLINE | ID: mdl-24157452

ABSTRACT

In Europe, autochthonous hepatitis E is caused by genotype 3 hepatitis E virus (HEV) in almost all cases. A total of 15 infections with genotype 4 HEV were diagnosed in France from May 2009 to April 2012, and all but one of the HEV-4 strains implicated in these infections were genetically related and highly similar to HEV-4 sequences isolated from swine in Belgium. In addition, 5 autochthonous HEV-4 infections have been described in the region of Lazio, Italy, during March and April 2011, and these HEV sequences were 100% identical to one another but showed relatively low similarity (74-85%) to HEV-4 RNA samples collected in France. We report 6 additional HEV-4 infections that were diagnosed from May to July 2012 which represented 50% of the HEV infections diagnosed during this period in our clinical microbiology laboratory. Five of these HEV-4 strains were associated with autochthonous infections and were clustered together and with the majority of HEV-4 previously described in France, whereas the sixth strain was genetically divergent. Taken together with reports from other teams, these observations indicate that autochthonous infections with HEV-4 are emerging in Europe and have been transmitted by at least two distinct sources.


Subject(s)
Communicable Diseases, Emerging/epidemiology , Communicable Diseases, Emerging/virology , Hepatitis E virus/classification , Hepatitis E virus/genetics , Hepatitis E/epidemiology , Hepatitis E/virology , Cluster Analysis , France/epidemiology , Genotype , Hepatitis E virus/isolation & purification , Humans , Italy/epidemiology , Phylogeny , RNA, Viral/genetics
9.
J Med Virol ; 85(3): 462-71, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23239466

ABSTRACT

Hepatitis E virus (HEV) is an emerging cause of acute hepatitis in Europe, particularly in southern France, and HEV is a new causative agent of chronic hepatitis and cirrhosis in immunocompromised patients. However, the data regarding HEV infection after kidney transplantation are still scarce with respect to the clinical issues that have been raised, and no study has specifically focused on kidney transplant recipients. This study described the clinical features and outcomes of HEV infections in a cohort of kidney transplant recipients living in southeastern France. The epidemiological, clinical, and virological characteristics of HEV infections diagnosed by PCR over a 53-month period were retrospectively analyzed in a cohort of 1,350 kidney transplant recipients monitored at the Marseille University Hospital. Sixteen HEV infections were diagnosed, all of which were autochthonous and involved genotype 3 viruses (HEV-3). Chronic infections occurred in 80% of these patients and resolved in half of the cases after a median time of 39 months. The rate of HEV clearance was 54% after a decrease in the dose of immunosuppressants. One patient developed liver cirrhosis 14 months after infection and experienced acute rejection after a decrease in the dose of immunosuppressants. Autochthonous HEV-3 infections in kidney transplant recipients progress to chronicity in most cases and might be complicated by early liver cirrhosis. Chronic HEV infection can resolve following the reduction of immunosuppressive therapy, but ribavirin may be required if reduction of the immunosuppressant dose is not associated with HEV clearance or is inappropriate for the patient management.


Subject(s)
Hepatitis E virus/isolation & purification , Hepatitis E/epidemiology , Hepatitis E/pathology , Kidney Transplantation/adverse effects , Adult , Aged , Chronic Disease/epidemiology , Cohort Studies , Female , France/epidemiology , Genotype , Hepatitis E/virology , Hepatitis E virus/classification , Hepatitis E virus/genetics , Humans , Immunocompromised Host , Immunosuppressive Agents/administration & dosage , Immunosuppressive Agents/adverse effects , Male , Middle Aged , Polymerase Chain Reaction , Retrospective Studies , Transplantation
10.
Emerg Infect Dis ; 18(8): 1361-4, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22840196

ABSTRACT

During January-March 2011, diagnoses of hepatitis E virus (HEV) infection increased in Marseille University hospitals in southeastern France. HEV genotype 4, which is described almost exclusively in Asia, was recovered from 2 persons who ate uncooked pork liver sausage. Genetic sequences were 96.7% identical to those recently described in swine in Europe.


Subject(s)
Hepatitis E virus/genetics , Hepatitis E/diagnosis , Hepatitis E/epidemiology , Adult , Aged , Aged, 80 and over , Animals , Female , Food Microbiology , France/epidemiology , Genotype , Hepatitis Antibodies/blood , Hepatitis E/virology , Hepatitis E virus/classification , Hepatitis E virus/immunology , Humans , Liver/virology , Male , Middle Aged , RNA, Viral/blood , RNA, Viral/genetics , Sequence Analysis, DNA , Swine/virology , Zoonoses/virology
11.
Diagnostics (Basel) ; 12(10)2022 Sep 30.
Article in English | MEDLINE | ID: mdl-36292073

ABSTRACT

Hepatitis E is mostly autochthonous in Western developed countries, eating pig-derived products being the most frequently documented source. Hepatitis E virus (HEV) infection is usually asymptomatic or self-limiting, but it can cause acute liver failure. HEV serological testing was performed using EUROIMMUN immunoenzymatic assays. HEV RNA in the serum was determined using an in-house real-time reverse transcriptase PCR procedure. The HEV genotype was determined through phylogenetic analysis after Sanger sequencing was performed using an in-house procedure. The case patient, an immunocompetent patient in his 60s with type 2 diabetes and no documented chronic liver disease, was hospitalized in February 2021 in an intensive care unit due to an initially unexplained coma. He presented metformin overdose and fulminant hepatitis E (HEV RNA in the serum was 4,140,000 copies/mL) that evolved toward death. The HEV genotype was 3f. We identified eight previous hepatitis E in diabetic patients, but with no metformin excessive plasma concentration, in the literature. Three patients were liver transplant recipients and three died. HEV infection can be severe and life-threatening in diabetic patients, which warrants HEV testing in this special population in the case of an altered general condition and/or liver cytolysis.

12.
Emerg Infect Dis ; 17(8): 1510-2, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21801637

ABSTRACT

We report meningitis with diffuse neuralgic pain or polyradiculoneuropathy associated with PCR-documented acute hepatitis E in 2 adults. These observations suggest that diagnostic testing for hepatitis E virus should be conducted for patients who have neurologic symptoms and liver cytolysis.


Subject(s)
Hepatitis E virus/isolation & purification , Hepatitis E/complications , Meningitis, Viral/virology , Polyradiculoneuropathy/virology , Acute Disease , Female , France/epidemiology , Hepatitis E/epidemiology , Hepatitis E/virology , Hepatitis E virus/genetics , Humans , Male , Meningitis, Viral/epidemiology , Middle Aged , Polymerase Chain Reaction/methods , Polyradiculoneuropathy/epidemiology , RNA, Viral/analysis
13.
J Med Virol ; 83(10): 1704-16, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21837786

ABSTRACT

Hepatitis E virus (HEV) is a newly-identified causative agent of acute and chronic hepatitis in severely immunocompromized patients. The present study sought to assess the prevalences of past, recent, on-going, and chronic HEV infections in patients infected with human immunodeficiency virus (HIV) in Marseille, South-eastern France, and to determine if they were correlated with the patients' immunological status or with cirrhosis. Anti-HEV IgG and IgM and HEV RNA testing were concurrently performed on the plasma from 184 patients infected with HIV, including 81 with a CD4+ T-lymphocyte count (CD4 count) <50 cells/mm(3) and 32 with a cirrhosis. Prevalence of anti-HEV IgG and IgM was 4.4% (8/184) and 1.6% (3/184), respectively. Past, recent, and on-going infections were observed in 3.3% (6/184), 1.6% (3/184), and 0.5% (1/184) of the patients, respectively. Anti-HEV antibodies prevalence did not differ significantly according to CD4 count, cirrhosis, sex, age, mode of HIV transmission, and infection with hepatitis B or C virus. Anti-HEV IgG seroreversion was observed in two patients. The patient whose plasma tested positive for HEV RNA had a CD4 count <50 cells/mm(3) ; HEV genotype was 3f. In this patient, longitudinal testing showed HEV RNA positivity during a 10-month period, indicating chronic HEV infection; in contrast, anti-HEV IgG never tested positive. Further studies are needed to evaluate the performance of commercial HEV serological assays in patients infected with HIV and to assess the actual incidence, prevalence, and outcome of HEV infection in this special group of patients. HEV RNA testing is necessary for such purposes.


Subject(s)
HIV Infections/complications , Hepatitis E virus/immunology , Hepatitis E/complications , Adolescent , Adult , Aged , Base Sequence , CD4 Lymphocyte Count , CD4-Positive T-Lymphocytes , Female , France/epidemiology , HIV Infections/epidemiology , Hepatitis Antibodies/blood , Hepatitis E/epidemiology , Hepatitis E/immunology , Hepatitis E virus/genetics , Humans , Immunocompromised Host , Immunoglobulin G/blood , Immunoglobulin M/blood , Liver Cirrhosis/complications , Longitudinal Studies , Male , Middle Aged , Phylogeny , RNA, Viral/blood , Sequence Analysis, RNA
14.
Sci Rep ; 11(1): 4039, 2021 02 17.
Article in English | MEDLINE | ID: mdl-33597592

ABSTRACT

Human papillomaviruses (HPV) play a key role in promoting human anogenital cancers. Current high-risk HPV screening or diagnosis tests involve cytological or molecular techniques mostly based on qualitative HPV DNA detection. Here, we describe the development of a rapid quantitative polymerase chain reaction (qPCR) detection test of HPV16 and HPV18 oncogenes (E6 and E7) normalized on human gene encoding GAPDH. Optimized qPCR parameters were defined, and analytical specificities were validated. The limit of detection was 101 for all genes tested. Assay performances were evaluated on clinical samples (n = 96). Concordance between the Xpert HPV assay and the triplex assay developed here was 93.44% for HPV16 and 73.58% for HPV18. HPV co-infections were detected in 15 samples. The systems developed in the present study can be used in complement to traditional HPV tests for specifically validating the presence of HPV16 and/or HPV18. It can also be used for the follow-up of patients with confirmed infection and at risk of developing lesions, through the quantification of E6 and E7 oncogene expression (mRNA) normalized on the GAPDH expression levels.


Subject(s)
Alphapapillomavirus/genetics , Multiplex Polymerase Chain Reaction/methods , Papillomavirus Infections/diagnosis , DNA, Viral/genetics , DNA-Binding Proteins/genetics , Female , Humans , Oncogene Proteins, Viral/genetics , Oncogenes/genetics , Papillomaviridae/genetics , Papillomavirus E7 Proteins/genetics , Papillomavirus Infections/genetics , Papillomavirus Infections/virology , RNA, Messenger/genetics , Repressor Proteins/genetics , Reproducibility of Results
17.
J Clin Epidemiol ; 91: 111-120, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28728922

ABSTRACT

OBJECTIVES: The aim of this study was to determine relevant items for reporting clinical trials on implantable medical devices (IMDs) and to identify reporting guidelines which include these items. STUDY DESIGN AND SETTING: A panel of experts identified the most relevant items for evaluating IMDs from an initial list based on reference papers. We then conducted a systematic review of articles indexed in MEDLINE. We retrieved reporting guidelines from the EQUATOR network's library for health research reporting. Finally, we screened these reporting guidelines to find those using our set of reporting items. RESULTS: Seven relevant reporting items were selected that related to four topics: randomization, learning curve, surgical setting, and device information. A total of 348 reporting guidelines were identified, among which 26 met our inclusion criteria. However, none of the 26 reporting guidelines presented all seven items together. The most frequently reported item was timing of randomization (65%). On the contrary, device information and learning curve effects were poorly specified. CONCLUSION: To our knowledge, this study is the first to identify specific items related to IMDs in reporting guidelines for clinical trials. We have shown that no existing reporting guideline is totally suitable for these devices.


Subject(s)
Prostheses and Implants/standards , Randomized Controlled Trials as Topic/methods , Research Report/standards , Guidelines as Topic , Humans , Randomized Controlled Trials as Topic/standards
18.
J Clin Virol ; 37(3): 213-7, 2006 Nov.
Article in English | MEDLINE | ID: mdl-17010665

ABSTRACT

BACKGROUND: Hepatitis B virus (HBV) surface antibodies (anti-HBs) testing is useful in various clinical circumstances, including identification of HBV susceptible individuals in pre- and post-vaccination programs. OBJECTIVES: To assess the clinical performance of Beckman Coulter's anti-HBs chemiluminescence immunoassay (Access AbHBsII). STUDY DESIGN: Laboratory performances were evaluated on 1207 routine samples pre-screened with Abbott Axsym anti-HBs assay and divided into three different panels: vaccinated subjects (n=232), subjects with resolved HBV infection (n=150) and negative subjects for anti-HBs (n=825). Sera with discrepant results were resolved by an alternative method and further chart review. RESULTS: The overall concordance between Access and Axsym assays was 95.8%. The relative sensitivity, relative specificity, positive predictive value and negative predictive value were 97.8%, 98.1%, 96%, and 99%, respectively. Of the 51 discrepant results, eight were false negative by Access, fifteen were false positive by Access, including sera from seven pregnant women, two patients with acute leukemia, and four with inflammatory syndromes. CONCLUSIONS: The Beckman Coulter's Access AbHBsII assay displays satisfactory relative sensitivity and specificity performances. The assay has good precision and reliability and is technically simple and fast.


Subject(s)
Hepatitis B Surface Antigens/analysis , Hepatitis B/diagnosis , Immunoassay/instrumentation , Humans , Immunoassay/methods , Luminescent Measurements , Reproducibility of Results , Sensitivity and Specificity
20.
J Clin Virol ; 68: 32-6, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26071332

ABSTRACT

BACKGROUND: Immunization against hepatitis B virus (HBV) in kidney transplantation (KT) candidates and recipients is recommended. If anti-HBV surface antigen antibody (anti-HBsAb) titer of 10 IU/L is admitted to be protective, the optimal threshold, at and after KT, is unknown. In addition, the natural evolution of anti-HBsAb titers after KT is not reported. OBJECTIVES: To describe rates of protective immunity to HBV at time of KT (baseline) and evolution of anti-HBsAb titers during the following year. STUDY DESIGN: We retrospectively analyzed HBV serology at baseline, 15 days, and 4 and 12 months post-KT. No patient received vaccination during the study period, but information about previous vaccination was unavailable. RESULTS: At baseline 80% of 141 recipients had anti-HBsAb titer ≥10 IU/L. Among these 113 patients, 84 had subsequent HBV serologies at day 15 and month 4, and 67 had also serology at month 12. At month 12, 25% of patients had lost protective anti-HBsAb titers (p<0.001). The duration of protective anti-HBsAb titers was significantly longer when the initial titer was ≥ 100 IU/L versus <100 IU/L (log-rank test p<0.0001). Protective titers at month 12 persisted in 93% of patients with initial titer ≥100 IU/L compared to 33% with 10-100IU/L titer (p<0.0001). In contrast, duration of protective titers did not differ according to the anti-HBV core antigen antibody status at baseline. CONCLUSIONS: Despite a high prevalence of protective anti-HBsAb titer at KT, the loss of protective immunity during the following year was considerable, particularly when initial anti-HBsAb titer was <100 IU/L.


Subject(s)
Hepatitis B Antibodies/blood , Hepatitis B Surface Antigens/immunology , Kidney Transplantation , Adult , Aged , Female , Hepatitis B/immunology , Hepatitis B/prevention & control , Humans , Longitudinal Studies , Male , Middle Aged , Retrospective Studies
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