Search | Virtual Health Library

1.

Machine learning interpretable models of cell mechanics from protein images.

Schmitt, Matthew S; Colen, Jonathan; Sala, Stefano; Devany, John; Seetharaman, Shailaja; Caillier, Alexia; Gardel, Margaret L; Oakes, Patrick W; Vitelli, Vincenzo.

Cell ; 187(2): 481-494.e24, 2024 01 18.

Article in English | MEDLINE | ID: mdl-38194965

2.

ST3GAL1 and ßII-spectrin pathways control CAR T cell migration to target tumors.

Hong, Yeonsun; Walling, Brandon L; Kim, Hye-Ran; Serratelli, William S; Lozada, John R; Sailer, Cooper J; Amitrano, Andrea M; Lim, Kihong; Mongre, Raj Kumar; Kim, Kyun-Do; Capece, Tara; Lomakina, Elena B; Reilly, Nicholas S; Vo, Kevin; Gerber, Scott A; Fan, Tan-Chi; Yu, Alice Lin-Tsing; Oakes, Patrick W; Waugh, Richard E; Jun, Chang-Duk; Reagan, Patrick M; Kim, Minsoo.

Nat Immunol ; 24(6): 1007-1019, 2023 06.

Article in English | MEDLINE | ID: mdl-37069398

3.

Forcing cells into shape: the mechanics of actomyosin contractility.

Murrell, Michael; Oakes, Patrick W; Lenz, Martin; Gardel, Margaret L.

Nat Rev Mol Cell Biol ; 16(8): 486-98, 2015 Aug.

Article in English | MEDLINE | ID: mdl-26130009

4.

Measuring response functions of active materials from data.

Molaei, Mehdi; Redford, Steven A; Chou, Wen-Hung; Scheff, Danielle; de Pablo, Juan J; Oakes, Patrick W; Gardel, Margaret L.

Proc Natl Acad Sci U S A ; 120(42): e2305283120, 2023 10 17.

Article in English | MEDLINE | ID: mdl-37819979

5.

CCR7 fuels and LFA-1 grips.

Oakes, Patrick W; Fowell, Deborah J.

Nat Immunol ; 19(6): 516-518, 2018 06.

Article in English | MEDLINE | ID: mdl-29777210

6.

Limiting pool and actin architecture controls myosin cluster sizes in adherent cells.

Chou, Wen-Hung; Molaei, Mehdi; Wu, Huini; Oakes, Patrick W; Beach, Jordan R; Gardel, Margaret L.

Biophys J ; 123(2): 157-171, 2024 Jan 16.

Article in English | MEDLINE | ID: mdl-38062704

7.

Nonmuscle myosin 2 filaments are processive in cells.

Vitriol, Eric A; Quintanilla, Melissa A; Tidei, Joseph J; Troughton, Lee D; Cody, Abigail; Cisterna, Bruno A; Jane, Makenzie L; Oakes, Patrick W; Beach, Jordan R.

Biophys J ; 122(18): 3678-3689, 2023 09 19.

Article in English | MEDLINE | ID: mdl-37218133

8.

Tissue tension and not interphase cell shape determines cell division orientation in the Drosophila follicular epithelium.

Finegan, Tara M; Na, Daxiang; Cammarota, Christian; Skeeters, Austin V; Nádasi, Tamás J; Dawney, Nicole S; Fletcher, Alexander G; Oakes, Patrick W; Bergstralh, Dan T.

EMBO J ; 38(3)2019 02 01.

Article in English | MEDLINE | ID: mdl-30478193

9.

Meeting report - the ever-fascinating world of septins.

Baillet, Anita; McMurray, Michael A; Oakes, Patrick W.

J Cell Sci ; 134(24)2021 12 15.

Article in English | MEDLINE | ID: mdl-34910818

10.

T_RM integrins CD103 and CD49a differentially support adherence and motility after resolution of influenza virus infection.

Reilly, Emma C; Lambert Emo, Kris; Buckley, Patrick M; Reilly, Nicholas S; Smith, Ian; Chaves, Francisco A; Yang, Hongmei; Oakes, Patrick W; Topham, David J.

Proc Natl Acad Sci U S A ; 117(22): 12306-12314, 2020 06 02.

Article in English | MEDLINE | ID: mdl-32439709

11.

Lamellipodium is a myosin-independent mechanosensor.

Oakes, Patrick W; Bidone, Tamara C; Beckham, Yvonne; Skeeters, Austin V; Ramirez-San Juan, Guillermina R; Winter, Stephen P; Voth, Gregory A; Gardel, Margaret L.

Proc Natl Acad Sci U S A ; 115(11): 2646-2651, 2018 03 13.

Article in English | MEDLINE | ID: mdl-29487208

12.

Multiscale model of integrin adhesion assembly.

Bidone, Tamara C; Skeeters, Austin V; Oakes, Patrick W; Voth, Gregory A.

PLoS Comput Biol ; 15(6): e1007077, 2019 06.

Article in English | MEDLINE | ID: mdl-31163027

13.

Model-based traction force microscopy reveals differential tension in cellular actin bundles.

Soiné, Jérôme R D; Brand, Christoph A; Stricker, Jonathan; Oakes, Patrick W; Gardel, Margaret L; Schwarz, Ulrich S.

PLoS Comput Biol ; 11(3): e1004076, 2015 Mar.

Article in English | MEDLINE | ID: mdl-25748431

14.

Geometry regulates traction stresses in adherent cells.

Oakes, Patrick W; Banerjee, Shiladitya; Marchetti, M Cristina; Gardel, Margaret L.

Biophys J ; 107(4): 825-33, 2014 Aug 19.

Article in English | MEDLINE | ID: mdl-25140417

15.

α-catenin middle- and actin-binding domain unfolding mutants differentially impact epithelial strength and sheet migration.

Quinn, Jeanne M; Wang, Yuou; Wood, Megan; Flozak, Annette S; Le, Phuong M; Yemelyanov, Alex; Oakes, Patrick W; Gottardi, Cara J.

Mol Biol Cell ; 35(5): ar65, 2024 May 01.

Article in English | MEDLINE | ID: mdl-38507238

16.

Local monomer levels and established filaments potentiate non-muscle myosin 2 assembly.

Quintanilla, Melissa A; Patel, Hiral; Wu, Huini; Sochacki, Kem A; Chandrasekar, Shreya; Akamatsu, Matthew; Rotty, Jeremy D; Korobova, Farida; Bear, James E; Taraska, Justin W; Oakes, Patrick W; Beach, Jordan R.

J Cell Biol ; 223(4)2024 04 01.

Article in English | MEDLINE | ID: mdl-38353656

17.

Actin assembly factors regulate the gelation kinetics and architecture of F-actin networks.

Falzone, Tobias T; Oakes, Patrick W; Sees, Jennifer; Kovar, David R; Gardel, Margaret L.

Biophys J ; 104(8): 1709-19, 2013 Apr 16.

Article in English | MEDLINE | ID: mdl-23601318

18.

LIM domain proteins.

Sala, Stefano; Oakes, Patrick W.

Curr Biol ; 33(9): R339-R341, 2023 05 08.

Article in English | MEDLINE | ID: mdl-37160086

19.

Shining a light on RhoA: Optical control of cell contractility.

Chandrasekar, Shreya; Beach, Jordan R; Oakes, Patrick W.

Int J Biochem Cell Biol ; 161: 106442, 2023 08.

Article in English | MEDLINE | ID: mdl-37348811

20.

Quantifying Strain-Sensing Protein Recruitment During Stress Fiber Repair.

Seetharaman, Shailaja; Sala, Stefano; Gardel, Margaret L; Oakes, Patrick W.

Methods Mol Biol ; 2600: 169-182, 2023.

Article in English | MEDLINE | ID: mdl-36587097

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