Search details
1.
PathDIP 5: improving coverage and making enrichment analysis more biologically meaningful.
Nucleic Acids Res
; 52(D1): D663-D671, 2024 Jan 05.
Article
in English
| MEDLINE | ID: mdl-37994706
2.
Drugst.One - a plug-and-play solution for online systems medicine and network-based drug repurposing.
Nucleic Acids Res
; 2024 May 23.
Article
in English
| MEDLINE | ID: mdl-38783119
3.
MirDIP 5.2: tissue context annotation and novel microRNA curation.
Nucleic Acids Res
; 51(D1): D217-D225, 2023 01 06.
Article
in English
| MEDLINE | ID: mdl-36453996
4.
Pathway integration and annotation: building a puzzle with non-matching pieces and no reference picture.
Brief Bioinform
; 23(5)2022 09 20.
Article
in English
| MEDLINE | ID: mdl-36063560
5.
USNAP: fast unique dense region detection and its application to lung cancer.
Bioinformatics
; 39(8)2023 08 01.
Article
in English
| MEDLINE | ID: mdl-37527019
6.
Three decades of advancements in osteoarthritis research: insights from transcriptomic, proteomic, and metabolomic studies.
Osteoarthritis Cartilage
; 32(4): 385-397, 2024 Apr.
Article
in English
| MEDLINE | ID: mdl-38049029
7.
Evolution and advancements in genomics and epigenomics in OA research: How far we have come.
Osteoarthritis Cartilage
; 2024 Feb 28.
Article
in English
| MEDLINE | ID: mdl-38428513
8.
IID 2021: towards context-specific protein interaction analyses by increased coverage, enhanced annotation and enrichment analysis.
Nucleic Acids Res
; 50(D1): D640-D647, 2022 01 07.
Article
in English
| MEDLINE | ID: mdl-34755877
9.
An integrated multiomics analysis of rectal cancer patients identified POU2F3 as a putative druggable target and entinostat as a cytotoxic enhancer of 5-fluorouracil.
Int J Cancer
; 153(2): 437-449, 2023 07 15.
Article
in English
| MEDLINE | ID: mdl-36815540
10.
miRAnno-network-based functional microRNA annotation.
Bioinformatics
; 38(2): 592-593, 2022 01 03.
Article
in English
| MEDLINE | ID: mdl-34297061
11.
Proteomic and genomic profiling of plasma exosomes from patients with ankylosing spondylitis.
Ann Rheum Dis
; 82(11): 1429-1443, 2023 11.
Article
in English
| MEDLINE | ID: mdl-37532285
12.
Normothermic Ex-vivo Kidney Perfusion in a Porcine Auto-Transplantation Model Preserves the Expression of Key Mitochondrial Proteins: An Unbiased Proteomics Analysis.
Mol Cell Proteomics
; 20: 100101, 2021.
Article
in English
| MEDLINE | ID: mdl-34033948
13.
pathDIP 4: an extended pathway annotations and enrichment analysis resource for human, model organisms and domesticated species.
Nucleic Acids Res
; 48(D1): D479-D488, 2020 01 08.
Article
in English
| MEDLINE | ID: mdl-31733064
14.
GSOAP: a tool for visualization of gene set over-representation analysis.
Bioinformatics
; 36(9): 2923-2925, 2020 05 01.
Article
in English
| MEDLINE | ID: mdl-31977031
15.
BioPAX-Parser: parsing and enrichment analysis of BioPAX pathways.
Bioinformatics
; 36(15): 4377-4378, 2020 08 01.
Article
in English
| MEDLINE | ID: mdl-32437515
16.
A stemness screen reveals C3orf54/INKA1 as a promoter of human leukemia stem cell latency.
Blood
; 133(20): 2198-2211, 2019 05 16.
Article
in English
| MEDLINE | ID: mdl-30796022
17.
IID 2018 update: context-specific physical protein-protein interactions in human, model organisms and domesticated species.
Nucleic Acids Res
; 47(D1): D581-D589, 2019 01 08.
Article
in English
| MEDLINE | ID: mdl-30407591
18.
Extracellular Matrix Injury of Kidney Allografts in Antibody-Mediated Rejection: A Proteomics Study.
J Am Soc Nephrol
; 31(11): 2705-2724, 2020 11.
Article
in English
| MEDLINE | ID: mdl-32900843
19.
mirDIP 4.1-integrative database of human microRNA target predictions.
Nucleic Acids Res
; 46(D1): D360-D370, 2018 01 04.
Article
in English
| MEDLINE | ID: mdl-29194489
20.
Modeling tumor progression via the comparison of stage-specific graphs.
Methods
; 132: 34-41, 2018 01 01.
Article
in English
| MEDLINE | ID: mdl-28684340