Search | Virtual Health Library

1.

Compartmentalized ocular lymphatic system mediates eye-brain immunity.

Yin, Xiangyun; Zhang, Sophia; Lee, Ju Hyun; Dong, Huiping; Mourgkos, George; Terwilliger, Gordon; Kraus, Aurora; Geraldo, Luiz Henrique; Poulet, Mathilde; Fischer, Suzanne; Zhou, Ting; Mohammed, Farrah Shalima; Zhou, Jiangbing; Wang, Yongfu; Malloy, Seth; Rohner, Nicolas; Sharma, Lokesh; Salinas, Irene; Eichmann, Anne; Thomas, Jean-Leon; Saltzman, W Mark; Huttner, Anita; Zeiss, Caroline; Ring, Aaron; Iwasaki, Akiko; Song, Eric.

Nature ; 628(8006): 204-211, 2024 Apr.

Article in English | MEDLINE | ID: mdl-38418880

2.

From darkness to discovery: evolutionary, adaptive, and translational genetic insights from cavefish.

Swaminathan, Amruta; Xia, Fanning; Rohner, Nicolas.

Trends Genet ; 40(1): 24-38, 2024 Jan.

Article in English | MEDLINE | ID: mdl-38707509

3.

Next-generation plasmids for transgenesis in zebrafish and beyond.

Kemmler, Cassie L; Moran, Hannah R; Murray, Brooke F; Scoresby, Aaron; Klem, John R; Eckert, Rachel L; Lepovsky, Elizabeth; Bertho, Sylvain; Nieuwenhuize, Susan; Burger, Sibylle; D'Agati, Gianluca; Betz, Charles; Puller, Ann-Christin; Felker, Anastasia; Ditrychova, Karolina; Bötschi, Seraina; Affolter, Markus; Rohner, Nicolas; Lovely, C Ben; Kwan, Kristen M; Burger, Alexa; Mosimann, Christian.

Development ; 150(8)2023 04 15.

Article in English | MEDLINE | ID: mdl-36975217

4.

Author Correction: Insulin resistance in cavefish as an adaptation to a nutrient-limited environment.

Riddle, Misty R; Aspiras, Ariel C; Gaudenz, Karin; Peuß, Robert; Sung, Jenny Y; Martineau, Brian; Peavey, Megan; Box, Andrew C; Tabin, Julius A; McGaugh, Suzanne; Borowsky, Richard; Tabin, Clifford J; Rohner, Nicolas.

Nature ; 588(7836): E1, 2020 Dec.

Article in English | MEDLINE | ID: mdl-33188369

5.

Metabolic reprogramming underlies cavefish muscular endurance despite loss of muscle mass and contractility.

Olsen, Luke; Levy, Michaella; Medley, J Kyle; Hassan, Huzaifa; Miller, Brandon; Alexander, Richard; Wilcock, Emma; Yi, Kexi; Florens, Laurence; Weaver, Kyle; McKinney, Sean A; Peuß, Robert; Persons, Jenna; Kenzior, Alexander; Maldonado, Ernesto; Delventhal, Kym; Gluesenkamp, Andrew; Mager, Edward; Coughlin, David; Rohner, Nicolas.

Proc Natl Acad Sci U S A ; 120(5): e2204427120, 2023 01 31.

Article in English | MEDLINE | ID: mdl-36693105

6.

Off the deep end: What can deep learning do for the gene expression field?

Raicu, Ana-Maria; Fay, Justin C; Rohner, Nicolas; Zeitlinger, Julia; Arnosti, David N.

J Biol Chem ; 299(1): 102760, 2023 01.

Article in English | MEDLINE | ID: mdl-36462664

7.

Unraveling stress resilience: Insights from adaptations to extreme environments by Astyanax mexicanus cavefish.

Cobham, Ansa E; Rohner, Nicolas.

J Exp Zool B Mol Dev Evol ; 342(3): 178-188, 2024 May.

Article in English | MEDLINE | ID: mdl-38247307

8.

3D spheroid culturing of Astyanax mexicanus liver-derived cell lines recapitulates distinct transcriptomic and metabolic states of in vivo tissue environment.

Biswas, Tathagata; Rajendran, Naresh; Hassan, Huzaifa; Li, Hua; Zhao, Chongbei; Rohner, Nicolas.

J Exp Zool B Mol Dev Evol ; 342(3): 301-312, 2024 May.

Article in English | MEDLINE | ID: mdl-38192038

9.

The prevalence of copy number increase at multiallelic copy number variants associated with cave colonization.

Pokrovac, Ivan; Rohner, Nicolas; Pezer, Zeljka.

Mol Ecol ; 33(9): e17339, 2024 May.

Article in English | MEDLINE | ID: mdl-38556927

10.

Insulin resistance in cavefish as an adaptation to a nutrient-limited environment.

Riddle, Misty R; Aspiras, Ariel C; Gaudenz, Karin; Peuß, Robert; Sung, Jenny Y; Martineau, Brian; Peavey, Megan; Box, Andrew C; Tabin, Julius A; McGaugh, Suzanne; Borowsky, Richard; Tabin, Clifford J; Rohner, Nicolas.

Nature ; 555(7698): 647-651, 2018 03 29.

Article in English | MEDLINE | ID: mdl-29562229

11.

Repeated evolution of circadian clock dysregulation in cavefish populations.

Mack, Katya L; Jaggard, James B; Persons, Jenna L; Roback, Emma Y; Passow, Courtney N; Stanhope, Bethany A; Ferrufino, Estephany; Tsuchiya, Dai; Smith, Sarah E; Slaughter, Brian D; Kowalko, Johanna; Rohner, Nicolas; Keene, Alex C; McGaugh, Suzanne E.

PLoS Genet ; 17(7): e1009642, 2021 07.

Article in English | MEDLINE | ID: mdl-34252077

12.

Phylogeographic relationships and morphological evolution between cave and surface Astyanax mexicanus populations (De Filippi 1853) (Actinopterygii, Characidae).

Garduño-Sánchez, Marco; Hernández-Lozano, Jorge; Moran, Rachel L; Miranda-Gamboa, Ramsés; Gross, Joshua B; Rohner, Nicolas; Elliott, William R; Miller, Jeff; Lozano-Vilano, Lourdes; McGaugh, Suzanne E; Ornelas-García, C Patricia.

Mol Ecol ; 32(20): 5626-5644, 2023 Oct.

Article in English | MEDLINE | ID: mdl-37712324

13.

The cavefish Astyanax mexicanus.

Rohner, Nicolas.

Nat Methods ; 20(7): 948-950, 2023 Jul.

Article in English | MEDLINE | ID: mdl-37434002

14.

Comparative transcriptome analysis of wild and lab populations of Astyanax mexicanus uncovers differential effects of environment and morphotype on gene expression.

Krishnan, Jaya; Persons, Jenna L; Peuß, Robert; Hassan, Huzaifa; Kenzior, Alexander; Xiong, Shaolei; Olsen, Luke; Maldonado, Ernesto; Kowalko, Johanna E; Rohner, Nicolas.

J Exp Zool B Mol Dev Evol ; 334(7-8): 530-539, 2020 11.

Article in English | MEDLINE | ID: mdl-32017448

15.

Dark world rises: The emergence of cavefish as a model for the study of evolution, development, behavior, and disease.

McGaugh, Suzanne E; Kowalko, Johanna E; Duboué, Erik; Lewis, Peter; Franz-Odendaal, Tamara A; Rohner, Nicolas; Gross, Joshua B; Keene, Alex C.

J Exp Zool B Mol Dev Evol ; 334(7-8): 397-404, 2020 11.

Article in English | MEDLINE | ID: mdl-32638529

16.

Stable transgenesis in Astyanax mexicanus using the Tol2 transposase system.

Stahl, Bethany A; Peuß, Robert; McDole, Brittnee; Kenzior, Alexander; Jaggard, James B; Gaudenz, Karin; Krishnan, Jaya; McGaugh, Suzanne E; Duboue, Erik R; Keene, Alex C; Rohner, Nicolas.

Dev Dyn ; 248(8): 679-687, 2019 08.

Article in English | MEDLINE | ID: mdl-30938001

17.

Early adipogenesis contributes to excess fat accumulation in cave populations of Astyanax mexicanus.

Xiong, Shaolei; Krishnan, Jaya; Peuß, Robert; Rohner, Nicolas.

Dev Biol ; 441(2): 297-304, 2018 09 15.

Article in English | MEDLINE | ID: mdl-29883659

18.

CRISPR mutagenesis confirms the role of oca2 in melanin pigmentation in Astyanax mexicanus.

Klaassen, Hannah; Wang, Yongfu; Adamski, Kay; Rohner, Nicolas; Kowalko, Johanna E.

Dev Biol ; 441(2): 313-318, 2018 09 15.

Article in English | MEDLINE | ID: mdl-29555241

19.

Temperature preference of cave and surface populations of Astyanax mexicanus.

Tabin, Julius A; Aspiras, Ariel; Martineau, Brian; Riddle, Misty; Kowalko, Johanna; Borowsky, Richard; Rohner, Nicolas; Tabin, Clifford J.

Dev Biol ; 441(2): 338-344, 2018 09 15.

Article in English | MEDLINE | ID: mdl-29704470

20.

The African coelacanth genome provides insights into tetrapod evolution.

Amemiya, Chris T; Alföldi, Jessica; Lee, Alison P; Fan, Shaohua; Philippe, Hervé; Maccallum, Iain; Braasch, Ingo; Manousaki, Tereza; Schneider, Igor; Rohner, Nicolas; Organ, Chris; Chalopin, Domitille; Smith, Jeramiah J; Robinson, Mark; Dorrington, Rosemary A; Gerdol, Marco; Aken, Bronwen; Biscotti, Maria Assunta; Barucca, Marco; Baurain, Denis; Berlin, Aaron M; Blatch, Gregory L; Buonocore, Francesco; Burmester, Thorsten; Campbell, Michael S; Canapa, Adriana; Cannon, John P; Christoffels, Alan; De Moro, Gianluca; Edkins, Adrienne L; Fan, Lin; Fausto, Anna Maria; Feiner, Nathalie; Forconi, Mariko; Gamieldien, Junaid; Gnerre, Sante; Gnirke, Andreas; Goldstone, Jared V; Haerty, Wilfried; Hahn, Mark E; Hesse, Uljana; Hoffmann, Steve; Johnson, Jeremy; Karchner, Sibel I; Kuraku, Shigehiro; Lara, Marcia; Levin, Joshua Z; Litman, Gary W; Mauceli, Evan; Miyake, Tsutomu.

Nature ; 496(7445): 311-6, 2013 Apr 18.

Article in English | MEDLINE | ID: mdl-23598338

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