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1.
Molecular cartography uncovers evolutionary and microenvironmental dynamics in sporadic colorectal tumors.
Cell
; 186(25): 5620-5637.e16, 2023 12 07.
Article
in English
| MEDLINE | ID: mdl-38065082
2.
Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps.
Cell
; 184(26): 6262-6280.e26, 2021 12 22.
Article
in English
| MEDLINE | ID: mdl-34910928
3.
GammaGateR: semi-automated marker gating for single-cell multiplexed imaging.
Bioinformatics
; 2024 Jun 04.
Article
in English
| MEDLINE | ID: mdl-38833684
4.
Inhibition of autocrine HGF maturation overcomes cetuximab resistance in colorectal cancer.
Cell Mol Life Sci
; 81(1): 28, 2024 Jan 12.
Article
in English
| MEDLINE | ID: mdl-38212428
5.
Apposition of Fibroblasts With Metaplastic Gastric Cells Promotes Dysplastic Transition.
Gastroenterology
; 165(2): 374-390, 2023 08.
Article
in English
| MEDLINE | ID: mdl-37196797
6.
Intestinal Epithelial Digestive, Transport, and Barrier Protein Expression Is Increased in Environmental Enteric Dysfunction.
Lab Invest
; 103(4): 100036, 2023 04.
Article
in English
| MEDLINE | ID: mdl-36870290
7.
Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images.
Bioinformatics
; 38(6): 1700-1707, 2022 03 04.
Article
in English
| MEDLINE | ID: mdl-34983062
8.
Rab11FIP1-deficient mice develop spontaneous inflammation and show increased susceptibility to colon damage.
Am J Physiol Gastrointest Liver Physiol
; 323(3): G239-G254, 2022 09 01.
Article
in English
| MEDLINE | ID: mdl-35819177
9.
MIRIAM: A machine and deep learning single-cell segmentation and quantification pipeline for multi-dimensional tissue images.
Cytometry A
; 101(6): 521-528, 2022 06.
Article
in English
| MEDLINE | ID: mdl-35084791
10.
Novel induction of CD40 expression by tumor cells with RAS/RAF/PI3K pathway inhibition augments response to checkpoint blockade.
Mol Cancer
; 20(1): 85, 2021 06 06.
Article
in English
| MEDLINE | ID: mdl-34092233
11.
Lysophosphatidic Acid Increases Maturation of Brush Borders and SGLT1 Activity in MYO5B-deficient Mice, a Model of Microvillus Inclusion Disease.
Gastroenterology
; 159(4): 1390-1405.e20, 2020 10.
Article
in English
| MEDLINE | ID: mdl-32534933
12.
Key histopathologic features in idiopathic noncirrhotic portal hypertension: an interobserver agreement study and proposal for diagnostic criteria.
Mod Pathol
; 34(3): 592-602, 2021 03.
Article
in English
| MEDLINE | ID: mdl-32958831
13.
Trop2 is upregulated in the transition to dysplasia in the metaplastic gastric mucosa.
J Pathol
; 251(3): 336-347, 2020 07.
Article
in English
| MEDLINE | ID: mdl-32432338
14.
MITI minimum information guidelines for highly multiplexed tissue images.
Nat Methods
; 19(3): 262-267, 2022 03.
Article
in English
| MEDLINE | ID: mdl-35277708
15.
Bcl2-Expressing Quiescent Type B Neural Stem Cells in the Ventricular-Subventricular Zone Are Resistant to Concurrent Temozolomide/X-Irradiation.
Stem Cells
; 37(12): 1629-1639, 2019 12.
Article
in English
| MEDLINE | ID: mdl-31430423
16.
Loss of Rab25 promotes the development of skin squamous cell carcinoma through the dysregulation of integrin trafficking.
J Pathol
; 249(2): 227-240, 2019 10.
Article
in English
| MEDLINE | ID: mdl-31144312
17.
The BDNF rs6265 Polymorphism is a Modifier of Cardiomyocyte Contractility and Dilated Cardiomyopathy.
Int J Mol Sci
; 21(20)2020 Oct 10.
Article
in English
| MEDLINE | ID: mdl-33050457
18.
Abnormal Rab11-Rab8-vesicles cluster in enterocytes of patients with microvillus inclusion disease.
Traffic
; 18(7): 453-464, 2017 07.
Article
in English
| MEDLINE | ID: mdl-28407399
19.
Advances in Evaluation of Chronic Diarrhea in Infants.
Gastroenterology
; 154(8): 2045-2059.e6, 2018 Jun.
Article
in English
| MEDLINE | ID: mdl-29654747
20.
The C-terminal region of A-kinase anchor protein 350 (AKAP350A) enables formation of microtubule-nucleation centers and interacts with pericentriolar proteins.
J Biol Chem
; 292(50): 20394-20409, 2017 12 15.
Article
in English
| MEDLINE | ID: mdl-29054927