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Science ; 368(6495): 1135-1140, 2020 06 05.
Article in English | MEDLINE | ID: mdl-32499444

ABSTRACT

Determining where an object has been is a fundamental challenge for human health, commerce, and food safety. Location-specific microbes in principle offer a cheap and sensitive way to determine object provenance. We created a synthetic, scalable microbial spore system that identifies object provenance in under 1 hour at meter-scale resolution and near single-spore sensitivity and can be safely introduced into and recovered from the environment. This system solves the key challenges in object provenance: persistence in the environment, scalability, rapid and facile decoding, and biocontainment. Our system is compatible with SHERLOCK, a Cas13a RNA-guided nucleic acid detection assay, facilitating its implementation in a wide range of applications.


Subject(s)
DNA Barcoding, Taxonomic/methods , DNA, Bacterial/isolation & purification , DNA, Fungal/isolation & purification , Environmental Microbiology , Microbiota/genetics , Spores/genetics , CRISPR-Cas Systems , DNA, Bacterial/genetics , DNA, Fungal/genetics , RNA, Guide, Kinetoplastida
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