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1.
Cell ; 164(3): 447-59, 2016 Jan 28.
Article in English | MEDLINE | ID: mdl-26777403

ABSTRACT

Plant roots forage the soil for minerals whose concentrations can be orders of magnitude away from those required for plant cell function. Selective uptake in multicellular organisms critically requires epithelia with extracellular diffusion barriers. In plants, such a barrier is provided by the endodermis and its Casparian strips--cell wall impregnations analogous to animal tight and adherens junctions. Interestingly, the endodermis undergoes secondary differentiation, becoming coated with hydrophobic suberin, presumably switching from an actively absorbing to a protective epithelium. Here, we show that suberization responds to a wide range of nutrient stresses, mediated by the stress hormones abscisic acid and ethylene. We reveal a striking ability of the root to not only regulate synthesis of suberin, but also selectively degrade it in response to ethylene. Finally, we demonstrate that changes in suberization constitute physiologically relevant, adaptive responses, pointing to a pivotal role of the endodermal membrane in nutrient homeostasis.


Subject(s)
Arabidopsis/physiology , Plant Roots/physiology , Abscisic Acid/metabolism , Arabidopsis/cytology , Cell Differentiation , Ethylenes/metabolism , Fluoresceins/analysis , Lipids/chemistry , Plant Roots/cytology , Signal Transduction
2.
Plant Cell Physiol ; 2024 Aug 31.
Article in English | MEDLINE | ID: mdl-39215599

ABSTRACT

Plants maintain nutrient homeostasis by controlling the activities and abundance of nutrient transporters. In Arabidopsis thaliana, the borate (B) transporter BOR1 plays a role in the efficient translocation of B under low-B conditions. BOR1 undergoes polyubiquitination in the presence of sufficient B and is then transported to the vacuole via multivesicular bodies (MVBs) to prevent B accumulation in tissues at a toxic level. A previous study indicated that BOR1 physically interacts with µ subunits of adaptor protein complexes AP-3 and AP-4, both involved in vacuolar sorting pathways. In this study, we investigated the roles of AP-3 and AP-4 subunits in BOR1 trafficking in Arabidopsis. The lack of AP-3 subunits did not affect either vacuolar sorting or polar localization of BOR1-GFP, whereas the absence of AP-4 subunits resulted in a delay in high-B-induced vacuolar sorting without affecting polar localization. Super-resolution microscopy revealed a rapid sorting of BOR1-GFP into AP-4-positive spots in the trans-Golgi network (TGN) upon high-B supply. These results indicate that AP-4 is involved in sequestration of ubiquitinated BOR1 into a TGN-specific subdomain "vacuolar-trafficking zone," and is required for efficient sorting to MVB and vacuole. Our findings elucidate the rapid vacuolar sorting process facilitated by AP-4 in plant nutrient transporters.

3.
Plant Cell ; 33(2): 420-438, 2021 04 17.
Article in English | MEDLINE | ID: mdl-33866370

ABSTRACT

Plants take up and translocate nutrients through transporters. In Arabidopsis thaliana, the borate exporter BOR1 acts as a key transporter under boron (B) limitation in the soil. Upon sufficient-B supply, BOR1 undergoes ubiquitination and is transported to the vacuole for degradation, to avoid overaccumulation of B. However, the mechanisms underlying B-sensing and ubiquitination of BOR1 are unknown. In this study, we confirmed the lysine-590 residue in the C-terminal cytosolic region of BOR1 as the direct ubiquitination site and showed that BOR1 undergoes K63-linked polyubiquitination. A forward genetic screen identified that amino acid residues located in vicinity of the substrate-binding pocket of BOR1 are essential for the vacuolar sorting. BOR1 variants that lack B-transport activity showed a significant reduction of polyubiquitination and subsequent vacuolar sorting. Coexpression of wild-type (WT) and a transport-defective variant of BOR1 in the same cells showed degradation of the WT but not the variant upon sufficient-B supply. These findings suggest that polyubiquitination of BOR1 relies on its conformational transition during the transport cycle. We propose a model in which BOR1, as a B transceptor, directly senses the B concentration and promotes its own polyubiquitination and vacuolar sorting for quick and precise maintenance of B homeostasis.


Subject(s)
Antiporters/metabolism , Arabidopsis Proteins/metabolism , Boron/pharmacology , Proteolysis/drug effects , Ubiquitination , Amino Acid Sequence , Amino Acid Substitution , Antiporters/chemistry , Arabidopsis Proteins/chemistry , Binding Sites , Genetic Testing , Green Fluorescent Proteins/metabolism , Lysine/metabolism , Models, Biological , Polyubiquitin/metabolism , Protein Transport/drug effects , Protons , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/metabolism , Substrate Specificity , Ubiquitination/drug effects , Vacuoles/metabolism
4.
J Plant Res ; 137(5): 939-950, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39069582

ABSTRACT

Zinc (Zn) is an essential element for plants. Numerous proteins in different cellular compartments require Zn for their structure and function. Zn can be toxic when it accumulates in high levels in the cytoplasm. Therefore, Zn homeostasis at tissue, cell, and organelle levels is vital for plant growth. A part of the metal tolerance protein (MTP) / Cation Diffusion Facilitator (CDF) transporters functions as Zn transporters, exporting Zn from the cytosol to various membrane compartments. In Arabidopsis thaliana, MTP1, MTP2, MTP3, MTP4, MTP5, and MTP12 are classified as Zn transporters (Zn-CDF). In this study, we systematically analyzed the localization of GFP-fused Zn-CDFs in the leaf epidermal cells of Nicotiana benthamiana. As previously reported, MTP1 and MTP3 were localized to tonoplast, MTP2 to endoplasmic reticulum, and MTP5 to Golgi. In addition, we identified the localization of MTP4 to trans-Golgi Network (TGN). Since MTP4 is specifically expressed in pollen, we analyzed the localization of MTP4-GFP in the Arabidopsis pollen tubes and confirmed that it is in the TGN. We also showed the Zn transport capability of MTP4 in yeast cells. We then analyzed the phenotype of an mtp4 T-DNA insertion mutant under both limited and excess Zn conditions. We found that their growth and fertility were not largely different from the wild-type. Our study has paved the way for investigating the possible roles of MTP4 in metallating proteins in the secretory pathway or in exporting excess Zn through exocytosis. In addition, our system of GFP-fused MTPs will help study the mechanisms for targeting transporters to specific membrane compartments.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Pollen Tube , trans-Golgi Network , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis/growth & development , trans-Golgi Network/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Pollen Tube/growth & development , Pollen Tube/metabolism , Pollen Tube/genetics , Zinc/metabolism , Cation Transport Proteins/metabolism , Cation Transport Proteins/genetics , Nicotiana/genetics , Nicotiana/metabolism
5.
Biol Cell ; 113(5): 264-269, 2021 May.
Article in English | MEDLINE | ID: mdl-33443774

ABSTRACT

BACKGROUND INFORMATION: Plants use transporters polarly localised in the plasma membrane for the directional transport of nutrients. The boric acid/borate (B) exporter BOR1 is localised polarly in the inner lateral domain of the plasma membrane in various root cells for efficient translocation of B under B limitation. With a high B supply, BOR1 is ubiquitinated and transported to vacuoles for degradation. The polar localisation and vacuolar targeting of BOR1 are maintained by different endocytosis mechanisms. RESULTS: We demonstrated that one of the most utilised inhibitors in endosomal recycling, brefeldin A (BFA), inhibits the polar localisation of BOR1. BFA inhibits a subset of guanine-nucleotide exchange factors (ARF-GEFs), regulators of vesicle formation. Using a transgenic line expressing BFA-resistant engineered GNOM, we identified GNOM as the key ARF-GEF in endocytosis and maintenance of the polar localisation of BOR1. CONCLUSIONS AND SIGNIFICANCE: We found that BFA inhibits the polar localisation of BOR1 by inhibiting GNOM activity. Our results suggest that GNOM-dependent endocytosis contributes to the maintenance of the polar localisation of BOR1 under B limitation. We propose a model of BOR1 transcytosis initiated from GNOM-dependent endocytosis.


Subject(s)
Antiporters/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Cell Membrane/metabolism , Guanine Nucleotide Exchange Factors/metabolism , Plants, Genetically Modified/metabolism , Brefeldin A/metabolism , Endocytosis , Protein Synthesis Inhibitors/metabolism
6.
Physiol Plant ; 171(4): 703-713, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33090485

ABSTRACT

BOR1 is an efflux transporter of boron (B), responsible for loading B into the xylem. It has been reported that nitrate (NO3 - ) concentrations significantly influence B concentrations in leaves and BOR1 mRNA accumulation in roots. Here, to unravel the interactive effects of B and NO3 - on plant growth and the function of BOR1 under the combination of B and NO3 - , seedling growth was analyzed in Col-0 and bor1 mutants. The growth of bor1 mutants was negatively affected by high NO3 - but neither by potassium chloride (KCl) nor ammonium (NH4 + ) under low B conditions, suggesting the involvement of BOR1 in growth under high NO3 - . Mutants of bor2 and bor4 did not exhibit such growth responses, suggesting that this effect was specific to BOR1 among the BORs tested. Under low B conditions, loss of the BOR1 function led to a more significant decrease in B concentrations in the presence of high NO3 - compared to normal NO3 - . Additionally, grafting experiments demonstrated that these effects of NO3 - occurred when BOR1 is absent in roots. High NO3 - treatment elevated BOR1 mRNA accumulation while the BOR1 protein accumulation was downregulated. These apparent opposite responses indicated that the transcriptional and (post-)translational regulations follow different patterns. Our work provides evidence of a novel regulation of BOR1 and another B transport system by both B and NO3 - in an interactive manner.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Antiporters , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Boron , Nitrates , Plant Roots/genetics , Plant Roots/metabolism
7.
Plant Physiol ; 179(4): 1569-1580, 2019 04.
Article in English | MEDLINE | ID: mdl-30710051

ABSTRACT

Boron (B) is an essential element in plants but is toxic when it accumulates to high levels. In root cells of Arabidopsis (Arabidopsis thaliana), the borate exporter BOR1 is polarly localized in the plasma membrane toward the stele side for directional transport of B. Upon high-B supply, BOR1 is rapidly internalized and degraded in the vacuole. The polar localization and B-induced vacuolar sorting of BOR1 are mediated by endocytosis from the plasma membrane. To dissect the endocytic pathways mediating the polar localization and vacuolar sorting, we investigated the contribution of the clathrin adaptor protein, ADAPTOR PROTEIN2 (AP2) complex, to BOR1 trafficking. In the mutants lacking µ- or σ-subunits of the AP2 complex, the polar localization and constitutive endocytosis of BOR1 under low-B conditions were dramatically disturbed. A coimmunoprecipitation assay showed association of the AP2 complex with BOR1, while it was independent of YxxΦ sorting motifs, which are in a cytosolic loop of BOR1. A yeast two-hybrid assay supported the interaction of the AP2 complex µ-subunit with the C-terminal tail but not with the YxxΦ motifs in the cytosolic loop of BOR1. Intriguingly, lack of the AP2 subunit did not affect the B-induced rapid internalization/vacuolar sorting of BOR1. Consistent with defects in the polar localization, the AP2 complex mutants showed hypersensitivity to B deficiency. Our results indicate that AP2-dependent endocytosis maintains the polar localization of BOR1 to support plant growth under low-B conditions, whereas the B-induced vacuolar sorting of BOR1 is mediated through an AP2-independent endocytic pathway.


Subject(s)
Antiporters/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/physiology , Arabidopsis/metabolism , Boron/metabolism , Endocytosis/physiology , Homeodomain Proteins/physiology , Nuclear Proteins/physiology , Antiporters/analysis , Arabidopsis Proteins/analysis , Arabidopsis Proteins/genetics , Cell Membrane/metabolism , Cell Polarity , Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Protein Transport , Two-Hybrid System Techniques
8.
Plant Cell ; 29(4): 824-842, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28341806

ABSTRACT

Boron uptake in Arabidopsis thaliana is mediated by nodulin 26-like intrinsic protein 5;1 (NIP5;1), a boric acid channel that is located preferentially on the soil side of the plasma membrane in root cells. However, the mechanism underlying this polar localization is poorly understood. Here, we show that the polar localization of NIP5;1 in epidermal and endodermal root cells is mediated by the phosphorylation of Thr residues in the conserved TPG (ThrProGly) repeat in the N-terminal region of NIP5;1. Although substitutions of Ala for three Thr residues in the TPG repeat did not affect lateral diffusion in the plasma membrane, these substitutions inhibited endocytosis and strongly compromised the polar localization of GFP-NIP5;1. Consistent with this, the polar localization was compromised in µ subunit mutants of the clathrin adaptor AP2. The Thr-to-Ala substitutions did not affect the boron transport activity of GFP-NIP5;1 in Xenopus laevis oocytes but did inhibit the ability to complement boron translocation to shoots and rescue growth defects in nip5;1-1 mutant plants under boron-limited conditions. These results demonstrate that the polar localization of NIP5;1 is maintained by clathrin-mediated endocytosis, is dependent on phosphorylation in the TPG repeat, and is necessary for the efficient transport of boron in roots.


Subject(s)
Aquaporins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Boron/metabolism , Endocytosis/physiology , Plant Roots/metabolism , Aquaporins/genetics , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Biological Transport/genetics , Biological Transport/physiology , Cell Membrane/metabolism , Endocytosis/genetics
9.
Plant J ; 2018 Jun 08.
Article in English | MEDLINE | ID: mdl-29882321

ABSTRACT

Boron (B) is an essential micronutrient for plants. To maintain B concentration in tissues at appropriate levels, plants use boric acid channels belonging to the NIP subfamily of aquaporins and BOR borate exporters. To regulate B transport, these transporters exhibit different cell-type specific expression, polar localization, and B-dependent post-transcriptional regulation. Here, we describe the development of genetically encoded biosensors for cytosolic boric acid to visualize the spatial distribution and temporal dynamics of B in plant tissues. The biosensors were designed based on the function of the NIP5;1 5'-untranslated region (UTR), which promotes mRNA degradation in response to an elevated cytosolic boric acid concentration. The signal intensities of the biosensor coupled with Venus fluorescent protein and a nuclear localization signal (uNIP5;1-Venus) showed negative correlation with intracellular B concentrations in cultured tobacco BY-2 cells. When expressed in Arabidopsis thaliana, uNIP5;1-Venus enabled the quantification of B distribution in roots at single-cell resolution. In mature roots, cytosolic B levels in stele were maintained under low B supply, while those in epidermal, cortical, and endodermal cells were influenced by external B concentrations. Another biosensor coupled with a luciferase protein fused to a destabilization PEST sequence (uNIP5;1-Luc) was used to visualize changes in cytosolic boric acid concentrations. Thus, uNIP5;1-Venus/Luc enables visualization of B transport in various plant cells/tissues.

10.
Plant Physiol ; 177(2): 759-774, 2018 06.
Article in English | MEDLINE | ID: mdl-29728453

ABSTRACT

Boron (B) is an essential element for plants; however, as high B concentrations are toxic, B transport must be tightly regulated. BOR1 is a borate exporter in Arabidopsis (Arabidopsis thaliana) that facilitates B translocation into shoots under B deficiency conditions. When the B supply is sufficient, BOR1 expression is down-regulated by selective degradation of BOR1 protein, while additional BOR1 regulatory mechanisms are proposed to exist. In this study, we identified a novel B-dependent BOR1 translational suppression mechanism. In vivo and in vitro reporter assays demonstrated that BOR1 translation was reduced in a B-dependent manner and that the 5'-untranslated region was both necessary and sufficient for this process. Mutational analysis revealed that multiple upstream open reading frames in the 5'-untranslated region were required for BOR1 translational suppression, and this process depended on the efficiency of translational reinitiation at the BOR1 open reading frame after translation of the upstream open reading frames. To understand the physiological significance of BOR1 regulation, we characterized transgenic plants defective in either one or both of the BOR1 regulation mechanisms. BOR1 translational suppression was induced at higher B concentrations than those triggering BOR1 degradation. Plants lacking both regulation mechanisms exhibited more severe shoot growth reduction under high-B conditions than did plants lacking BOR1 degradation alone, thus demonstrating the importance of BOR1 translational suppression. This study demonstrates that two mechanisms of posttranscriptional BOR1 regulation, each induced under different B concentrations, contribute to the avoidance of B toxicity in plants.


Subject(s)
Antiporters/genetics , Arabidopsis Proteins/genetics , Arabidopsis/drug effects , Boron/toxicity , 5' Untranslated Regions , Antiporters/metabolism , Arabidopsis/genetics , Arabidopsis Proteins/metabolism , Boron/administration & dosage , Gene Expression Regulation, Plant/drug effects , Open Reading Frames , Plants, Genetically Modified , Protein Biosynthesis , Proteolysis/drug effects
11.
Plant Physiol ; 178(3): 1269-1283, 2018 11.
Article in English | MEDLINE | ID: mdl-30266747

ABSTRACT

Boron is an essential plant micronutrient that plays a structural role in the rhamnogalacturonan II component of the pectic cell wall. To prevent boron deficiency under limiting conditions, its uptake, distribution, and homeostasis are mediated by boric acid transporters and channel proteins. Among the membrane channels that facilitate boric acid uptake are the type II nodulin intrinsic protein (NIP) subfamily of aquaporin-like proteins. Arabidopsis (Arabidopsis thaliana) possesses three NIP II genes (NIP5;1, NIP6;1, and NIP7;1) that show distinct tissue expression profiles (predominantly expressed in roots, stem nodes, and developing flowers, respectively). Orthologs of each are represented in all dicots. Here, we show that purified and reconstituted NIP7;1 is a boric acid facilitator. By using native promoter-reporter fusions, we show that NIP7;1 is expressed predominantly in anthers of young flowers in a narrow developmental window, floral stages 9 and 10, with protein accumulation solely within tapetum cells, where it is localized to the plasma membrane. Under limiting boric acid conditions, loss-of-function T-DNA mutants (nip7;1-1 and nip7;1-2) show reduced fertility, including shorter siliques and an increase in aborted seeds, compared with the wild type. Under these conditions, nip7;1 mutant pollen grains show morphological defects, increased aggregation, defective exine cell wall formation, reduced germination frequency, and decreased viability. During stages 9 and 10, the tapetum is essential for supplying materials to the pollen microspore cell wall. We propose that NIP7;1 serves as a gated boric acid channel in developing anthers that aids in the uptake of this critical micronutrient by tapetal cells.


Subject(s)
Aquaporins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Boric Acids/metabolism , Gametogenesis, Plant/genetics , Pollen/genetics , Aquaporins/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Biological Transport , Boron/metabolism , Cell Membrane/metabolism , Cell Wall/metabolism , Flowers/genetics , Flowers/growth & development , Flowers/metabolism , Membrane Transport Proteins/genetics , Membrane Transport Proteins/metabolism , Models, Molecular , Mutation , Phylogeny , Pollen/growth & development , Pollen/metabolism , Promoter Regions, Genetic/genetics , Recombinant Fusion Proteins
12.
Plant Cell Physiol ; 57(9): 1985-2000, 2016 Sep.
Article in English | MEDLINE | ID: mdl-27449211

ABSTRACT

Boron (B) is essential for plants but toxic in excess. The borate efflux transporter BOR1 is expressed in various root cells and localized to the inner/stele-side domain of the plasma membrane (PM) under low-B conditions. BOR1 is rapidly degraded through endocytosis upon sufficient B supply. The polar localization and degradation of BOR1 are considered important for efficient B translocation and avoidance of B toxicity, respectively. In this study, we first analyzed the subcellular localization of BOR1 in roots, cotyledons and hypocotyls, and revealed a polar localization in various cell types. We also found that the inner polarity of BOR1 is established after completion of cytokinesis in the root meristem. Moreover, variable-angle epifluorescence microscopy visualized BOR1-green fluorescent protein (GFP) as particles in the PM with significant lateral movements but in restricted areas. Importantly, a portion of BOR1-GFP particles co-localized with DYNAMIN-RELATED PROTEIN 1A (DRP1A), which is involved in scission of the clathrin-coated vesicles, and they disappeared together from the PM. To examine the contribution of DRP1A-mediated endocytosis to BOR1 localization and degradation, we developed an inducible expression system of the DRP1A K47A variant. The DRP1A variant prolonged the residence time of clathrin on the PM and inhibited endocytosis of membrane lipids. The dominant-negative DRP1A blocked endocytosis of BOR1 and disturbed its polar localization and B-induced degradation. Our results provided insight into the endocytic mechanisms that modulate the subcellular localization and abundance of a mineral transporter for nutrient homeostasis in plant cells.


Subject(s)
Antiporters/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Dynamins/metabolism , Endocytosis/physiology , Antiporters/genetics , Arabidopsis/cytology , Arabidopsis/drug effects , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Boron/metabolism , Boron/pharmacology , Dynamins/genetics , Endocytosis/drug effects , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Microscopy, Confocal , Plant Cells/metabolism , Plants, Genetically Modified , Red Fluorescent Protein
13.
Plant J ; 78(5): 890-902, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24654769

ABSTRACT

Boron is an essential micronutrient for higher plants. Boron deficiency is an important agricultural issue because it results in loss of yield quality and/or quantity in cereals and other crops. To understand boron transport mechanisms in cereals, we characterized OsNIP3;1, a member of the major intrinsic protein family in rice (Oryza sativa L.), because OsNIP3;1 is the most similar rice gene to the Arabidopsis thaliana boric acid channel genes AtNIP5;1 and AtNIP6;1. Yeast cells expressing OsNIP3;1 imported more boric acid than control cells. GFP-tagged OsNIP3;1 expressed in tobacco BY2 cells was localized to the plasma membrane. The accumulation of OsNIP3;1 transcript increased fivefold in roots within 6 h of the onset of boron starvation, but not in shoots. Promoter-GUS analysis suggested that OsNIP3;1 is expressed mainly in exodermal cells and steles in roots, as well as in cells around the vascular bundles in leaf sheaths and pericycle cells around the xylem in leaf blades. The growth of OsNIP3;1 RNAi plants was impaired under boron limitation. These results indicate that OsNIP3;1 functions as a boric acid channel, and is required for acclimation to boron limitation. Boron distribution among shoot tissues was altered in OsNIP3;1 knockdown plants, especially under boron-deficient conditions. This result demonstrates that OsNIP3;1 regulates boron distribution among shoot tissues, and that the correct boron distribution is crucial for plant growth.


Subject(s)
Boron/metabolism , Oryza/metabolism , Plant Proteins/metabolism , Biological Transport , Boron/deficiency , Gene Expression Regulation, Plant , Molecular Sequence Data , Oryza/genetics , Plant Proteins/genetics
14.
Plant Cell Physiol ; 56(5): 852-62, 2015 May.
Article in English | MEDLINE | ID: mdl-25619824

ABSTRACT

Boron (B) is an essential micronutrient for plants but is toxic when accumulated in excess. The plant BOR family encodes plasma membrane-localized borate exporters (BORs) that control translocation and homeostasis of B under a wide range of conditions. In this study, we examined the evolutionary divergence of BORs among terrestrial plants and showed that the lycophyte Selaginella moellendorffii and angiosperms have evolved two types of BOR (clades I and II). Clade I includes AtBOR1 and homologs previously shown to be involved in efficient transport of B under conditions of limited B availability. AtBOR1 shows polar localization in the plasma membrane and high-B-induced vacuolar sorting, important features for efficient B transport under low-B conditions, and rapid down-regulation to avoid B toxicity. Clade II includes AtBOR4 and barley Bot1 involved in B exclusion for high-B tolerance. We showed, using yeast complementation and B transport assays, that three genes in S. moellendorffii, SmBOR1 in clade I and SmBOR3 and SmBOR4 in clade II, encode functional BORs. Furthermore, amino acid sequence alignments identified an acidic di-leucine motif unique in clade I BORs. Mutational analysis of AtBOR1 revealed that the acidic di-leucine motif is required for the polarity and high-B-induced vacuolar sorting of AtBOR1. Our data clearly indicated that the common ancestor of vascular plants had already acquired two types of BOR for low- and high-B tolerance, and that the BOR family evolved to establish B tolerance in each lineage by adapting to their environments.


Subject(s)
Amino Acids/metabolism , Antiporters/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Borates/metabolism , Boron/metabolism , Cell Polarity , Evolution, Molecular , Vacuoles/metabolism , Amino Acid Motifs , Amino Acid Sequence , Arabidopsis/drug effects , Biological Transport , Bryopsida/metabolism , Cloning, Molecular , Conserved Sequence , DNA, Complementary/genetics , Molecular Sequence Data , Mutation/genetics , Phylogeny , Selaginellaceae/metabolism , Sequence Alignment
15.
J Plant Res ; 128(5): 863-73, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26013532

ABSTRACT

Endomembrane organization is essential for cell physiology. We previously identified an Arabidopsis thaliana mutant in which a plasma membrane (PM) marker GFP-NIP5;1 and trans-Golgi network/early endosome (TGN/EE) markers were accumulated in intracellular aggregates in epidermal cells of the root elongation zone. The mutant was identified as an allele of UDP-glucose epimerase 4 (UGE4)/root hair defective 1/root epidermal bulgar 1, which was previously described as a mutant with swollen root epidermal cells and has an altered sugar composition in cell wall polysaccharides. Importantly, these defects including aggregate formation were restored by supplementation of D-galactose in the medium. These results suggested that UDP-D-galactose synthesis by UGE4 is important for endomembrane organization in addition to cell wall structure. Here, we further investigated the nature of the aggregates using various markers of endomembrane compartments and BOR1-GFP, which traffics from PM to vacuole in response to high-B supply. The markers of multi-vesicular bodies/late endosomes (MVB/LEs) and BOR1-GFP were strongly accumulated in the intracellular aggregates, while those of the endoplasmic reticulum (ER), the vacuolar membrane, and the Golgi were only slightly affected in the uge4 mutant. The abnormal localizations of these markers in the uge4 mutant differed from the effects of inhibitors of actin and microtubule polymerization, although they also affected endomembrane organization. Furthermore, electron microscopy analysis revealed accumulation of abnormal high-electron-density vesicles in elongating epidermal cells. The abnormal vesicles were often associated or interconnected with TGN/EEs and contained ADP-ribosylation factor 1, which is usually localized to the Golgi and the TGN/EEs. On the other hand, structures of the ER, Golgi apparatus, and MVB/LEs were apparently normal in uge4 cells. Together, our data indicate the importance of UDP-D-galactose synthesis by UGE4 for the organization and function of endomembranes, especially TGN/EEs, which are a sorting station of the secretory and vacuolar pathways.


Subject(s)
Arabidopsis/genetics , UDPglucose 4-Epimerase/genetics , Uridine Diphosphate Galactose/metabolism , Arabidopsis/metabolism , Endosomes/metabolism , Plant Roots/genetics , Plant Roots/metabolism , UDPglucose 4-Epimerase/metabolism , trans-Golgi Network/metabolism
16.
Plant Cell Physiol ; 55(4): 704-14, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24343997

ABSTRACT

Endomembrane organization is important for various aspects of cell physiology, including membrane protein trafficking. To explore the molecular mechanisms regulating the trafficking of plasma membrane-localized proteins in plants, we screened for Arabidopsis mutants with defective localization of green fluorescent protein (GFP)-nodulin 26-like intrinsic protein (NIP)5;1. Fluorescence imaging-based screening led to the isolation of a mutant which accumulated abnormal intracellular aggregates labeled by GFP-NIP5;1. The aggregates appeared in epidermal cells in the root elongation zone and included the trans-Golgi network/early endosomes. Rough mapping and whole-genome sequencing identified the mutant as an allele of UDP-glucose 4-epimerase 4 (uge4)/root hair defective 1 (rhd1) /root epidermal bulgar 1 (reb 1), which was originally defined as a cell wall mutant. The responsible gene encodes UDP-glucose 4-epimerase 4 (UGE4), which functions in the biosynthesis of d-galactose, especially for the synthesis of the cell wall polysaccharide xyloglucan and arabinogalactan proteins (AGPs). The endomembrane aggregates in the mutants were absent in the presence of d-galactose, indicative of a requirement for a d-galactose-containing component in endomembrane organization. Genetic and pharmacological analyses suggested that the aggregates were not caused by the disruption of cell wall polysaccharides or the cytoskeleton. Overall, our results suggest that UGE4 activity in d-galactose synthesis is required for the structure of cell wall polysaccharides and endomembrane organization.


Subject(s)
Aquaporins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Cell Membrane/metabolism , Galactose/pharmacology , Intracellular Membranes/metabolism , Mutation/genetics , UDPglucose 4-Epimerase/metabolism , Actin Cytoskeleton/metabolism , Alleles , Arabidopsis/drug effects , Arabidopsis/enzymology , Arabidopsis/genetics , Boric Acids/metabolism , Cell Aggregation/drug effects , Cell Wall/drug effects , Cell Wall/metabolism , Chromosome Mapping , Cytoskeleton/drug effects , Cytoskeleton/metabolism , Endocytosis/drug effects , Endosomes/drug effects , Endosomes/metabolism , Ethylenes/metabolism , Genome, Plant , Glucans/metabolism , Green Fluorescent Proteins/metabolism , Intracellular Membranes/drug effects , Ion Channels/metabolism , Mucoproteins/metabolism , Plant Proteins/metabolism , Polysaccharides/metabolism , Protein Transport/drug effects , Sequence Analysis, DNA , Xylans/metabolism , trans-Golgi Network/drug effects , trans-Golgi Network/metabolism
17.
Plant Physiol ; 163(4): 1699-709, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24114060

ABSTRACT

Boron (B) is required for cross linking of the pectic polysaccharide rhamnogalacturonan II (RG-II) and is consequently essential for the maintenance of cell wall structure. Arabidopsis (Arabidopsis thaliana) BOR1 is an efflux B transporter for xylem loading of B. Here, we describe the roles of BOR2, the most similar paralog of BOR1. BOR2 encodes an efflux B transporter localized in plasma membrane and is strongly expressed in lateral root caps and epidermis of elongation zones of roots. Transfer DNA insertion of BOR2 reduced root elongation by 68%, whereas the mutation in BOR1 reduced it by 32% under low B availability (0.1 µm), but the reduction in shoot growth was not as obvious as that in the BOR1 mutant. A double mutant of BOR1 and BOR2 exhibited much more severe growth defects in both roots and shoots under B-limited conditions than the corresponding single mutants. All single and double mutants grew normally under B-sufficient conditions. These results suggest that both BOR1 and BOR2 are required under B limitation and that their roles are, at least in part, different. The total B concentrations in roots of BOR2 mutants were not significantly different from those in wild-type plants, but the proportion of cross-linked RG-II was reduced under low B availability. Such a reduction in RG-II cross linking was not evident in roots of the BOR1 mutant. Thus, we propose that under B-limited conditions, transport of boric acid/borate by BOR2 from symplast to apoplast is required for effective cross linking of RG-II in cell wall and root cell elongation.


Subject(s)
Anion Transport Proteins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/growth & development , Arabidopsis/metabolism , Boron/pharmacology , Pectins/metabolism , Plant Roots/growth & development , Arabidopsis/drug effects , Arabidopsis/genetics , Biological Transport/drug effects , Cell Size/drug effects , DNA, Bacterial/genetics , Dimerization , Models, Biological , Molecular Sequence Data , Mutagenesis, Insertional/genetics , Mutation/genetics , Organ Specificity/drug effects , Plant Epidermis/cytology , Plant Epidermis/drug effects , Plant Roots/drug effects , Plant Roots/metabolism , Plants, Genetically Modified , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/metabolism , Subcellular Fractions/drug effects , Subcellular Fractions/metabolism
18.
Plant Cell ; 23(9): 3547-59, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21908722

ABSTRACT

Boron (B) is an essential plant micronutrient that is toxic at higher levels. NIP5;1 is a boric acid channel required for B uptake and growth under B deficiency. Accumulation of the NIP5;1 transcript is upregulated under B deficiency in Arabidopsis thaliana roots. To elucidate the mechanism of regulation, the 5' untranslated region (UTR) of NIP5;1 was tested for its ability to confer B-dependent regulation using ß-glucuronidase and green fluorescent protein as reporters. This analysis showed that the 5' UTR was involved in NIP5;1 transcript accumulation in response to B conditions. We also found that high-B conditions trigger NIP5;1 mRNA degradation and that the sequence from +182 to +200 bp in the 5' UTR is required for this mRNA destabilization. In the nip5;1-1 mutant background, a NIP5;1 complementation construct without the 5' UTR produced high levels of mRNA accumulation, increased B concentrations in tissues, and reduced growth under high-B conditions. These data suggest that the 5' UTR controls B-dependent NIP5;1 mRNA degradation and that NIP5;1 mRNA degradation is important for plant acclimation to high-B conditions.


Subject(s)
Acclimatization , Aquaporins/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/drug effects , Boron/pharmacology , RNA Stability , 5' Untranslated Regions , Aquaporins/genetics , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Gene Expression Regulation, Plant , Molecular Sequence Data , Plant Roots/genetics , Plant Roots/metabolism , Plants, Genetically Modified/drug effects , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Promoter Regions, Genetic , RNA, Messenger/metabolism , RNA, Plant/metabolism
19.
J Plant Res ; 127(1): 57-66, 2014.
Article in English | MEDLINE | ID: mdl-24338062

ABSTRACT

After the accident of the Fukushima 1 Nuclear Power Plant in March 2011, radioactive cesium was released and paddy fields in a wide area including Fukushima Prefecture were contaminated. To estimate the levels of radioactive Cs accumulation in rice produced in Fukushima, it is crucial to obtain the actual data of Cs accumulation levels in rice plants grown in the actual paddy field in Fukushima City. We herein conducted a two-year survey in 2011 and 2012 of radioactive and non-radioactive Cs accumulation in rice using a number of rice cultivars grown in the paddy field in Fukushima City. Our study demonstrated a substantial variation in Cs accumulation levels among the cultivars of rice.


Subject(s)
Cesium Radioisotopes/metabolism , Fukushima Nuclear Accident , Oryza/metabolism , Soil/chemistry , Agriculture , Biodegradation, Environmental , Cesium Isotopes/analysis , Cesium Isotopes/metabolism , Cesium Radioisotopes/analysis , Japan , Nuclear Power Plants , Oryza/chemistry , Plant Stems/chemistry , Plant Stems/metabolism , Radiation Monitoring , Soil Pollutants, Radioactive/analysis , Soil Pollutants, Radioactive/metabolism , Species Specificity
20.
Plant Cell Physiol ; 54(7): 1056-63, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23596187

ABSTRACT

Boron (B) is an essential micronutrient for plants. Efflux-type B transporters, BORs, have been identified in Arabidopsis thaliana and rice. Here we identified BOR1 genes encoding B efflux transporters, from the hexaploid genome of wheat (Triticum aestivum L.). We cloned three genes closely related to OsBOR1 and named them TaBOR1.1, TaBOR1.2 and TaBOR1.3. All three TaBOR1s showed B efflux activities when expressed in tobacco BY-2 cells. TaBOR1-green fluorescent protein (GFP) fusion proteins were expressed in Arabidopsis leaf cells localized in the plasma membrane. The transcript accumulation patterns of the three genes differ in terms of tissue specificity and B nutrition responses. In roots, transcripts for all three genes accumulated abundantly while in shoots, the TaBOR1.2 transcript is the most abundant, followed by those of TaBOR1.1 and TaBOR1.3. Accumulation of TaBOR1.1 transcript is up-regulated under B deficiency conditions in both roots and shoots. In contrast, TaBOR1.2 transcript accumulation significantly increased in roots under excess B conditions. TaBOR1.3 transcript accumulation was reduced under excess B. Taken together, these results demonstrated that TaBOR1s are the B efflux transporters in wheat and, interestingly, the genes on the A, B and D genomes have different expression patterns.


Subject(s)
Boron/metabolism , Gene Expression Profiling , Gene Expression Regulation, Plant , Genome, Plant/genetics , Plant Proteins/genetics , Triticum/genetics , Amino Acid Sequence , Arabidopsis/cytology , Arabidopsis/genetics , Arabidopsis/metabolism , Cell Line , Cell Membrane/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Microscopy, Confocal , Molecular Sequence Data , Phylogeny , Plant Leaves/cytology , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Proteins/classification , Plant Proteins/metabolism , Plant Roots/genetics , Plant Roots/metabolism , Plant Shoots/genetics , Plant Shoots/metabolism , Polyploidy , Protein Isoforms/classification , Protein Isoforms/genetics , Protein Isoforms/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid , Triticum/metabolism
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