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1.
BMC Plant Biol ; 22(1): 140, 2022 Mar 24.
Article in English | MEDLINE | ID: mdl-35331150

ABSTRACT

BACKGROUND: Cabbage white butterflies (Pieris spp.) can be severe pests of Brassica crops such as Chinese cabbage, Pak choi (Brassica rapa) or cabbages (B. oleracea). Eggs of Pieris spp. can induce a hypersensitive response-like (HR-like) cell death which reduces egg survival in the wild black mustard (B. nigra). Unravelling the genetic basis of this egg-killing trait in Brassica crops could improve crop resistance to herbivory, reducing major crop losses and pesticides use. Here we investigated the genetic architecture of a HR-like cell death induced by P. brassicae eggs in B. rapa. RESULTS: A germplasm screening of 56 B. rapa accessions, representing the genetic and geographical diversity of a B. rapa core collection, showed phenotypic variation for cell death. An image-based phenotyping protocol was developed to accurately measure size of HR-like cell death and was then used to identify two accessions that consistently showed weak (R-o-18) or strong cell death response (L58). Screening of 160 RILs derived from these two accessions resulted in three novel QTLs for Pieris brassicae-induced cell death on chromosomes A02 (Pbc1), A03 (Pbc2), and A06 (Pbc3). The three QTLs Pbc1-3 contain cell surface receptors, intracellular receptors and other genes involved in plant immunity processes, such as ROS accumulation and cell death formation. Synteny analysis with A. thaliana suggested that Pbc1 and Pbc2 are novel QTLs associated with this trait, while Pbc3 also contains an ortholog of LecRK-I.1, a gene of A. thaliana previously associated with cell death induced by a P. brassicae egg extract. CONCLUSIONS: This study provides the first genomic regions associated with the Pieris egg-induced HR-like cell death in a Brassica crop species. It is a step closer towards unravelling the genetic basis of an egg-killing crop resistance trait, paving the way for breeders to further fine-map and validate candidate genes.


Subject(s)
Brassica rapa , Butterflies , Cell Death , Ovum/chemistry , Quantitative Trait Loci , Animals , Brassica rapa/genetics
2.
Adv Health Sci Educ Theory Pract ; 24(4): 665-690, 2019 10.
Article in English | MEDLINE | ID: mdl-31044324

ABSTRACT

Student participation in governance of education is of growing interest. However, it remains unclear what factors render this participation in institutional governance a success or a failure. Another question is: what are the perceived benefits for schools and students? We empirically explored experiences and perspectives of student representatives and program directors of all (8) medical and (1) veterinary schools in the Netherlands on factors that influence student participation in institutional governance and its values and challenges for schools and student representatives. A constructivist grounded theory study was performed. A theoretical sample of student representatives was invited to fill out an explorative, qualitative questionnaire. Next, focus groups with student representatives and interviews with all program directors were conducted. Data was analyzed using open, axial and selective coding by all authors. Experiences and perspectives of students and program directors were remarkably similar in both perceived influences and values. Four main categories of influences could be distinguished in student participation: (1) individual student characteristics, (2) individual staff characteristics, (3) the organization of student representatives and (4) the school's organization, including its culture and policy regarding student participation. A cohesive, well-organized and independent student organization has crucial impact on student participation in educational governance processes. For representatives, major benefits of participation are personal and career development. Challenges are low effectiveness and efficiency of their actions. A clear school policy on student participation and better introduction, feedback and coaching of representatives should be provided to improve student participation in governance processes.


Subject(s)
Cooperative Behavior , Education, Veterinary/organization & administration , Faculty, Medical , Students , Female , Focus Groups , Humans , Interviews as Topic , Male , Netherlands , Qualitative Research , Surveys and Questionnaires
3.
NPJ Digit Med ; 7(1): 186, 2024 Jul 11.
Article in English | MEDLINE | ID: mdl-38992186

ABSTRACT

Digital biomarkers that remotely monitor symptoms have the potential to revolutionize outcome assessments in future disease-modifying trials in Parkinson's disease (PD), by allowing objective and recurrent measurement of symptoms and signs collected in the participant's own living environment. This biomarker field is developing rapidly for assessing the motor features of PD, but the non-motor domain lags behind. Here, we systematically review and assess digital biomarkers under development for measuring non-motor symptoms of PD. We also consider relevant developments outside the PD field. We focus on technological readiness level and evaluate whether the identified digital non-motor biomarkers have potential for measuring disease progression, covering the spectrum from prodromal to advanced disease stages. Furthermore, we provide perspectives for future deployment of these biomarkers in trials. We found that various wearables show high promise for measuring autonomic function, constipation and sleep characteristics, including REM sleep behavior disorder. Biomarkers for neuropsychiatric symptoms are less well-developed, but show increasing accuracy in non-PD populations. Most biomarkers have not been validated for specific use in PD, and their sensitivity to capture disease progression remains untested for prodromal PD where the need for digital progression biomarkers is greatest. External validation in real-world environments and large longitudinal cohorts remains necessary for integrating non-motor biomarkers into research, and ultimately also into daily clinical practice.

4.
J Biomed Opt ; 17(11): 117007, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23192359

ABSTRACT

Currently, photoplethysmograms (PPGs) are mostly used to determine a patient's blood oxygenation and pulse rate. However, PPG morphology conveys more information about the patient's cardiovascular status. Extracting this information requires measuring clean PPG waveforms that are free of artifacts. PPGs are highly susceptible to motion, which can distort the PPG-derived data. Part of the motion artifacts are considered to result from sensor-tissue motion and sensor deformation. It is hypothesized that these motion artifacts correlate with movement of the sensor with respect to the skin. This hypothesis has been proven true in a laboratory setup. In vitro PPGs have been measured in a skin perfusion phantom that is illuminated by a laser diode. Optical motion artifacts are generated in the PPG by translating the laser diode with respect to the PPG photodiode. The optical motion artifacts have been reduced significantly in vitro, by using a normalized least-mean-square algorithm with only a single coefficient that uses the laser's displacement as a reference for the motion artifacts. Laser displacement has been measured accurately via self-mixing interferometry by a compact laser diode with a ball lens integrated into the package, which can be easily integrated into a commercial sensor.


Subject(s)
Photoplethysmography/methods , Algorithms , Artifacts , Humans , Interferometry , Lasers, Semiconductor , Motion , Optical Phenomena , Phantoms, Imaging , Photoplethysmography/instrumentation , Photoplethysmography/statistics & numerical data , Signal-To-Noise Ratio
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