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1.
J Clin Invest ; 82(3): 987-92, 1988 Sep.
Article in English | MEDLINE | ID: mdl-2458390

ABSTRACT

The HLA class I molecules identified serologically as HLA-B27 are highly associated with ankylosing spondylitis and related human disorders. All known HLA-B27 amino acid sequences contain a cysteine residue at position 67; no other published HLA class I sequence contains a cysteine within the hypervariable region of the alpha 1 domain, which extends from amino acid residues 63-84. To investigate the role of this cysteine residue in the antigenic structure of HLA-B27, we isolated a genomic clone encoding a molecule of the HLA-B27.1 subtype and performed oligonucleotide-directed mutagenesis to convert the cysteine at position 67 to a tyrosine. When transfected into mouse L cells, both the wild-type and Cys67----Tyr67 mutant B27 genes directed the synthesis and surface expression of molecules reactive with the monomorphic anti-HLA class I antibody W6/32. However, only the L cells transfected with the wild-type B27 gene reacted with the anti-B27 antibody ME1; L cells transfected with the mutant B27 were completely unreactive with this antibody. Experiments with hybrid exons created from the HLA-B27 and HLA-A2 genes yielded results consistent with the mapping of the ME1 epitope to the B27 alpha 1 domain. A second anti-B27 antibody, GS145.2, also showed markedly reduced binding to the Cys67----Tyr67 mutant. These studies document the importance of the unique Cys67 residue in the antigenic structure of HLA-B27.


Subject(s)
Antibodies, Monoclonal , Cysteine/genetics , Epitopes/immunology , HLA Antigens/genetics , Mutation , Amino Acid Sequence , Animals , Antigen-Antibody Reactions , Base Sequence , Epitopes/genetics , Flow Cytometry , HLA-B27 Antigen , Humans , L Cells , Mice , Molecular Sequence Data , Peptide Mapping , Transfection
2.
Trends Mol Med ; 7(6): 247-52, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11378513

ABSTRACT

Crohn's disease is a chronic inflammatory bowel disease characterized by transmural inflammation and granuloma formation. Several theories regarding the etiology of Crohn's disease have been proposed, one of which is infection with Mycobacterium avium subspecies paratuberculosis (M. paratuberculosis), which causes a similar disease in animals, and is present in the human food chain. Considerable evidence supports the presence of M. paratuberculosis in the intestinal tissues of many patients with Crohn's disease including culture, detection of homologous mycobacterial DNA, detection of the mycobacterial insertion sequence IS900 by both PCR and in situ hybridization in tissues, and a serologic immune response to recombinant M. paratuberculosis antigens. Despite this evidence, and our personal belief that M. paratuberculosis is a cause of Crohn's disease, widespread acceptance of this hypothesis will require evidence that specific anti-mycobacterial chemotherapy will cure the disease.


Subject(s)
Crohn Disease/etiology , Crohn Disease/microbiology , Mycobacterium avium/metabolism , Cell Wall/metabolism , Colitis, Ulcerative/microbiology , Crohn Disease/pathology , DNA/metabolism , DNA Transposable Elements/genetics , Granuloma/pathology , Humans , In Situ Hybridization , Nucleic Acid Hybridization , Polymerase Chain Reaction , Recombinant Proteins/metabolism
3.
Arch Neurol ; 45(6): 629-33, 1988 Jun.
Article in English | MEDLINE | ID: mdl-2835952

ABSTRACT

Many studies have either supported or discounted the role of coronaviruses as etiologic agents in multiple sclerosis (MS). Two new approaches were applied to investigate this controversy. First, monoclonal antibodies specific for either murine coronaviruses (mouse hepatitis viruses) or human coronaviruses were used to characterize the antigenic features of MS-derived coronaviruses SK and SD. Both isolates were found to have a mouse hepatitis virus-type profile. Second, serum and cerebrospinal fluid antibodies to different coronaviruses, including SD, were measured in MS and control groups. No significant difference in antibody level to coronaviruses was found between MS and control samples. The results of these antigenic studies do not support a specific association between MS and coronaviruses.


Subject(s)
Coronaviridae/isolation & purification , Multiple Sclerosis/microbiology , Adult , Antibodies, Viral/analysis , Humans , Middle Aged , Multiple Sclerosis/immunology , Murine hepatitis virus/isolation & purification
4.
Am J Med ; 85(6A): 59-60, 1988 Dec 23.
Article in English | MEDLINE | ID: mdl-2904764

ABSTRACT

Several rheumatic diseases were first shown to be associated with human leukocytic antigen (HLA)-B27 in 1973. Recent developments in understanding this association include the finding that there are at least six variants of HLA-B27 at the molecular level, with no one variant preferentially associated with disease. Detailed studies of the structure of the HLA-B27 molecular family are in progress in several laboratories. Mice expressing HLA-B27 and transmitting it to their offspring (transgenic mice) have been produced and are being studied for their response to bacteria that are known to trigger reactive arthritis in B27+ humans. A particular restriction fragment length polymorphism was recently claimed to be a genetic marker for an additional risk factor in ankylosing spondylitis, but two other laboratories have failed to confirm this finding.


Subject(s)
HLA-B Antigens/genetics , Spondylitis, Ankylosing/genetics , Animals , Deoxyribonucleases, Type II Site-Specific , Genetic Linkage , HLA-B27 Antigen , Humans , Mice , Mice, Transgenic/genetics , Polymorphism, Restriction Fragment Length
5.
Hum Immunol ; 33(4): 243-8, 1992 Apr.
Article in English | MEDLINE | ID: mdl-1379218

ABSTRACT

The consensus HLA-B27 sequence includes a unique constellation of amino acid residues along the peptide-binding cleft. To investigate the potential role of this region in the antigenic structure of HLA-B27, a panel of transfected cell lines was produced expressing 24 mutant B27 molecules with single or multiple substitutions within this constellation of residues. The cells were analyzed by flow cytometry with a panel of four anti-B27 mAb: ME1, GSP5.3, GS145.2, and B27M2. Previous studies have suggested that position 67 exerts a conformational effect on the ME1, GSP5.3, and GS145.2 epitopes. This was further supported in these studies by the observation that additional substitutions at the flanking residues 63 and 70 could reverse the disruption of these mAb epitopes by large residues at 67. Substitutions at positions 69-71 disrupted the binding of ME1 and GSP5.3, apparently by a direct effect. Individual substitutions at either of the two positions bearing residues unique to B27, 70 and 97, had no significant influence on the binding of any of the four mAb. The region of amino acid positions 63-71 in HLA-B27 thus appears to participate in the formation of at least three distinct epitopes shared by B27 and B7, identified by ME1, GSP5.3, and GS145.2.


Subject(s)
Amino Acids/genetics , Antibodies, Monoclonal/chemistry , Consensus Sequence , Epitopes/genetics , HLA-B27 Antigen/genetics , Mutagenesis, Site-Directed , Amino Acid Sequence , Animals , Asparagine/genetics , Epitopes/analysis , Epitopes/immunology , HLA-B27 Antigen/analysis , HLA-B27 Antigen/immunology , HLA-B7 Antigen/analysis , HLA-B7 Antigen/genetics , HLA-B7 Antigen/immunology , Mice , Threonine/genetics
6.
Aliment Pharmacol Ther ; 15(3): 337-46, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11207508

ABSTRACT

A number of theories regarding the aetiology of Crohn's disease have been proposed. Diet, infections, other unidentified environmental factors and immune disregulation, all working under the influence of a genetic predisposition, have been viewed with suspicion. Many now believe that Crohn's disease is a syndrome caused by several aetiologies. The two leading theories are the infectious and autoimmune theories. The leading infectious candidate is Mycobacterium avium subspecies paratuberculosis (Mycobacterium paratuberculosis), the causative agent of Johne's disease, an inflammatory bowel disease in a variety of mammals including cattle, sheep, deer, bison, monkeys and chimpanzees. The evidence to support M. paratuberculosis infection as a cause of Crohn's disease is mounting rapidly. Technical advances have allowed the identification and/or isolation of M. paratuberculosis from a significantly higher proportion of Crohn's disease tissues than from controls. These methodologies include: (i) improved culture techniques; (ii) development of M. paratuberculosis-specific polymerase chain reaction assays; (iii) development of a novel in situ hybridization method; (iv) efficacy of macrolide and anti-mycobacterial drug therapies; and (v) discovery of Crohn's disease-specific seroreactivity against two specific M. paratuberculosis recombinant antigens. The causal role for M. paratuberculosis in Crohn's disease and correlation of infection with specific stratification(s) of the disorder need to be investigated. The data implicating Crohn's as an autoimmune disorder may be viewed in a manner that supports the mycobacterial theory. The mycobacterial theory and the autoimmune theory are complementary; the first deals with the aetiology of the disorder, the second deals with its pathogenesis. Combined therapies directed against a mycobacterial aetiology and inflammation may be the optimal treatment of the disease.


Subject(s)
Autoimmune Diseases/immunology , Crohn Disease/microbiology , Mycobacterium avium Complex/pathogenicity , Mycobacterium avium-intracellulare Infection/complications , Animals , Antigens, Bacterial/analysis , Autoimmune Diseases/microbiology , Crohn Disease/etiology , Crohn Disease/physiopathology , DNA, Bacterial/analysis , Food Contamination , Humans , In Situ Hybridization , Inflammation , Milk, Human/microbiology , Mycobacterium avium Complex/immunology , Mycobacterium avium Complex/isolation & purification , Mycobacterium avium-intracellulare Infection/immunology , Polymerase Chain Reaction
7.
Am J Clin Pathol ; 106(3): 305-11, 1996 Sep.
Article in English | MEDLINE | ID: mdl-8816586

ABSTRACT

Helicobacter pylori is the causative agent of chronic gastritis, peptic ulcers, and is also associated with gastric cancer. Eradication of H pylori infection has proven to be difficult to confirm. The authors developed a nonradioactive in situ hybridization method for detection of H pylori and compared it with conventional methods for diagnosis of the infection. Reverse transcription followed by polymerase chain reaction (PCR) with two 22-base primers was used to amplify a 520 base pair (bp) segment of 16S rRNA from H pylori. The PCR product was labeled with digoxigenin and used as a probe. Specificity of the probe was tested by dot blot hybridization against DNA from 30 different strains of related and unrelated bacteria. Specificity of in situ hybridization assay was proven by the lack of hybridization on sections with gram negative and positive bacteria other than H pylori, with an unrelated probe, without probe, and after RNase treatment. A random sample of 15 biopsy specimens was blindly studied by in situ hybridization method and the results were compared with those of culture and conventional histology. Comparison of in situ hybridization and conventional histology showed agreement in all 15 specimens (5 negative and 10 positive). Between culture and in situ hybridization there was agreement in 13 cases (8 positive, 5 negative). Two cases were negative by culture but positive by in situ hybridization and histology. Nonradioactive in situ hybridization provides a sensitive and specific method for detection of H pylori infection. It should be particularly useful for confirmation of infection in cases equivocal with other methods, and potentially useful in post-treatment evaluation.


Subject(s)
Helicobacter Infections/microbiology , Helicobacter pylori/isolation & purification , In Situ Hybridization/methods , Stomach Diseases/microbiology , Base Sequence , Biopsy , DNA Probes , Helicobacter Infections/pathology , Humans , Paraffin Embedding , Sensitivity and Specificity , Stomach Diseases/pathology
8.
FEMS Microbiol Lett ; 188(2): 197-202, 2000 Jul 15.
Article in English | MEDLINE | ID: mdl-10913705

ABSTRACT

Metronidazole is a critical ingredient for combination therapies of Helicobacter pylori infection, the major cause of peptic ulcer and gastric cancer. It has been recently reported that metronidazole resistance from H. pylori ATCC43504 is caused by the insertion of a mini-IS605 sequence and deletion of sequences in an oxygen insensitive NAD(P)H nitroreductase encoding gene (rdxA). We also found that an additional gene (frxA) encoding NAD(P)H flavin oxidoreductase in the same strain was truncated by frame-shift mutations. To assess whether the frxA truncation is also involved in metronidazole resistance, metronidazole sensitive H. pylori strains ATCC43629 and SS1 were transformed by the truncated frxA gene cloned from strain ATCC43504. All transformed cells grew on agar plates containing 16 microg ml(-1) of metronidazole. The involvement of the frxA gene in metronidazole resistance was also confirmed by insertion inactivation of frxA and/or rdxA genes from strain ATCC43629 and one metronidazole sensitive clinical isolate H. pylori 2600. In addition, the frxA gene cloned from the H. pylori 2600 showed metronidazole nitroreductase activity in Escherichia coli and rendered ordinary metronidazole resistant E. coli to metronidazole sensitive cell. These results indicate that the frxA gene may also be involved in metronidazole resistance among clinical H. pylori isolates.


Subject(s)
Bacterial Proteins/genetics , Genes, Bacterial , Helicobacter pylori/genetics , NADH, NADPH Oxidoreductases/genetics , Amino Acid Sequence , Anti-Bacterial Agents/pharmacology , Bacterial Proteins/biosynthesis , Base Sequence , Cloning, Molecular , Escherichia coli/genetics , FMN Reductase , Helicobacter pylori/drug effects , Humans , Metronidazole/pharmacology , Microbial Sensitivity Tests , Molecular Sequence Data , Mutagenesis, Insertional , NADH, NADPH Oxidoreductases/biosynthesis , Nitroreductases/genetics , Recombinant Proteins/genetics
9.
J Med Microbiol ; 46(5): 372-6, 1997 May.
Article in English | MEDLINE | ID: mdl-9152031

ABSTRACT

The recent isolation of Helicobacter pylori from cats obtained from a commercial supplier has potentially important public health implications. The present study investigated whether H. pylori infection was common in stray cats. Twenty-five cats were examined for the presence of H. pylori by histological examination, culture and two polymerase chain reaction (PCR) assays. Histologically, the gastric biopsy specimens from all cats showed large spiral organisms typical of H. felis and not H. pylori. Samples from 23 cats yielded bacterial growth and two had no growth. Colonies grossly similar to H. pylori were tested for catalase, oxidase, urease and Gram's stain reactions. None was H. pylori. All samples tested as positive by the Helicobacter 16S rRNA genus-specific PCR assay and only six cats and a mouse stomach infected with H. heilmannii gave positive results with the adhesin subunit A (hpaA)-specific PCR assay, which is consistent with either H. pylori or H. heilmannii. The helicobacters identified in these samples by PCR were not cultivable and hence were probably H. heilmannii. H. pylori infection is uncommon in stray cats and owning pet cats should not be a threat to public health in relation to H. pylori infection.


Subject(s)
Cat Diseases/microbiology , Helicobacter Infections/veterinary , Helicobacter pylori/isolation & purification , Stomach/microbiology , Adhesins, Bacterial/genetics , Animals , Biopsy/veterinary , Blotting, Southern/veterinary , Cat Diseases/epidemiology , Cats , DNA, Bacterial/analysis , Helicobacter Infections/epidemiology , Helicobacter Infections/microbiology , Helicobacter pylori/genetics , Humans , Mice , Mice, Inbred BALB C , Polymerase Chain Reaction/veterinary , Prevalence , RNA, Ribosomal, 16S/genetics , Sensitivity and Specificity , Specific Pathogen-Free Organisms , Zoonoses
10.
Int J Antimicrob Agents ; 15(1): 31-6, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10856674

ABSTRACT

Metronidazole (Mtz), a pro-drug, requires reductive activation by ferredoxin-like electron carrier proteins to kill bacteria and Mtz resistance is associated with a decrease or deficiency of Mtz nitroreductase activities in a target cell. Several genes encoding ferredoxin-like or -linked proteins such as pyruvate oxidoreductase (POR), ferredoxin oxidoreductase (FOR), ferredoxin (FdxA), ferredoxin-like protein (FdxB), flavodoxin (FldA) and oxygen insensitive nitroreductase (RdxA) have been identified from the complete genomic sequence of Helicobacter pylori. To understand the roles of these genes in H. pylori Mtz resistance, the gene expression for the proteins was examined using a method optimized for quantitative reverse transcription polymerase chain reaction (RT-PCR). The RT-PCR products of FOR and RdxA were significantly decreased in the total RNA prepared from H. pylori cultured in the presence of Mtz as compared to the total RNA prepared from H. pylori cultured without Mtz in the media. A slight decrease, however, in band intensity of the RT-PCR products of the POR and, to a lesser extent, FdxB was obtained in the presence of Mtz. In contrast, the RT-PCR products of the FdxA, FldA, and GalE (UDP-galactose 4-epimerase; a control gene) were unchanged in total RNA prepared from H. pylori cultured with or without Mtz in the culture media. These results suggest that Mtz resistance may also be acquired by decreasing the transcription of some genes involved in Mtz reductive activation, in addition to the mutation in some individual genes such as rdxA.


Subject(s)
Genes, Bacterial , Helicobacter pylori/genetics , Nitroreductases/genetics , Base Sequence , DNA Primers , Helicobacter pylori/enzymology , Reverse Transcriptase Polymerase Chain Reaction
11.
J Microbiol Methods ; 42(2): 185-95, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11018275

ABSTRACT

M. avium subsp. paratuberculosis (M. paratuberculosis) is the causative agent of Johne's disease (JD) in ruminants leading to enormous economical losses in dairy and meat industries worldwide. During the subclinical stage of the disease, the infected animals are difficult if not impossible to detect by the available diagnostic tests including the PCR based ones. Although only considered an animal pathogen, cell wall deficient (CWD) forms of M. paratuberculosis have been isolated from patients with sarcoidosis and Crohn's disease (idiopathic diseases) in humans. Hence, the CWD form of this organism has been suspected to play a role in the pathogenesis of these diseases by persisting in the affected tissues and triggering a localized immune response and pathology. Differentiating between the CWD and acid-fast forms of this organism may lead to the determination of whether the CWD form is the pathogenic form in the subclinical cases of JD in animals and/or the etiologic agent for the above human diseases. To localize such organisms in tissue sections, CWD forms of mycobacteria were prepared in vitro and injected into beef cubes which were then formalin fixed and paraffin embedded. An in situ hybridization (ISH) technique, combined with the IS900 M. paratuberculosis-specific probe labeled with digoxigenin, was developed for the detection of nucleic acids specifically from the CWD forms but not their acid-fast forms in tissue sections. Specificity was confirmed by the negative finding with an irrelevant probe and with control tissue preparations containing CWD cells of related mycobacteria and unrelated organisms. This ISH procedure provides a way to distinguish between the acid-fast and CWD forms of M. paratuberculosis and to localize them in tissue sections. ISH may prove useful to evaluate the significance of CWD forms of M. paratuberculosis in the pathogenesis of JD, Crohn's disease and sarcoidosis.


Subject(s)
Cattle Diseases/microbiology , Cell Wall/metabolism , In Situ Hybridization/methods , Mycobacterium avium subsp. paratuberculosis/classification , Paratuberculosis/microbiology , Animals , Cattle , Crohn Disease/microbiology , Humans , Meat/microbiology , Mycobacterium avium subsp. paratuberculosis/genetics , Mycobacterium avium subsp. paratuberculosis/metabolism , Paraffin Embedding , Polymerase Chain Reaction
12.
Dig Liver Dis ; 34(1): 22-8, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11930899

ABSTRACT

BACKGROUND: Crohn's disease, an inflammatory bowel disease in humans, has a suspected aetiology of Mycobacterium avium subsp. Paratuberculosis. AIMS: To evaluate the role of rifabutin and clarithromycin anti-Mycobacterium avium subsp. Paratuberculosis treatment in Crohn's disease patients using an open clinical trial. METHODS: . A total of 36 patients with acute presentations of Crohn's disease, whose sera tested positive against p35 and p36 antigens (two recombinant proteins of Mycobacterium avium subsp. Paratuberculosis), were selected for treatment with rifabutin and macrolide antibiotic therapy Rifabutin and macrolide antibiotic therapy medications included 250 mg 1 po bid clarithromycin and 150 mg 1 po bid Ri-fabutin accompanied with a probiotic. Crohn's disease patients' response to rifabutin and macrolide antibiotic therapy was monitored over a period ranging from 4 to 17 months. RESULTS: Seven patients (19.4%) withdrew from the study since they were unable to tolerate medications. Of the remaining 29 patients, 21 (58.3%) reached a sustained state of improvement, traditionally defined as a decrease of 70 points between their entrance and exit Crohn's disease activity index scores together with the absence of the need of all other Crohn's medications, such as immunosuppressants and corticosteroids. Three Crohn's disease patients [8. 3%) noticed significant improvements, but required other Crohn's medications, concurrently with rifabutin and macrolide antibiotic therapy, to achieve and sustain improvement. Only 5 Crohn's disease patients (13.8%) were non-responders, noticing no marked improvement while on rifabutin and macrolide antibiotic therapy. CONCLUSION: The data add further evidence to support the role of rifabutin and macrolide antibiotic therapy in the treatment of Crohn's disease specifically in those patients with evidence of Mycobacterium avium subsp. Paratuberculosis infection. A large multi-centre clinical trial is needed to further explore these findings.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Antibiotics, Antitubercular/therapeutic use , Clarithromycin/therapeutic use , Crohn Disease/drug therapy , Mycobacterium avium subsp. paratuberculosis/isolation & purification , Paratuberculosis/drug therapy , Rifabutin/therapeutic use , Adolescent , Adult , Aged , Colonoscopy , Crohn Disease/microbiology , Female , Humans , Male , Middle Aged , Paratuberculosis/complications , Remission Induction , Treatment Outcome
13.
Vet Microbiol ; 77(3-4): 497-504, 2000 Dec 20.
Article in English | MEDLINE | ID: mdl-11118734

ABSTRACT

Crohn's disease (CD) is a chronic inflammatory bowel disease that is similar to Johne's disease in ruminants. Recent data have strengthened the association of M. avium subsp. paratuberculosis (M. paratuberculosis) with CD. To provide more evidence of an etiological association, antibody reactivities from CD patients were tested by immunoblotting against recombinant antigens that were identified previously from our M. paratuberculosis genomic library. Two clones (designated pMptb#40 (3.2-kb insert) and #48 (1.4-kb insert) expressing a 35K (p35)- and 36K(p36)-antigens showed specific reactivities with serum samples from CD patients. Serum samples from 75% of 53 CD patients, 14% of 35 normal individuals and 10% of 10 ulcerative colitis patients reacted to p35 antigen. Reactivities were also observed with serum samples from 89% of 89 CD patients, 14% of 50 normal controls and 15% of 29 ulcerative colitis patients reacted with p36 antigen. When the reactivity results from p35 and p36 were combined, the background from the controls was eliminated, i.e. only the CD patients reacted to both p35 and p36. The positive predictive value was 98% with specificity of 98% and the negative predictive value was 76% with sensitivity of 74% (39 positive out of 53). A statistical significance (p<0.0001) was observed when the results from CD serum samples reacting with either or both antigens were compared to the controls. The reactivity of anti-M. paratuberculosis (specifically against p35 and p36 antigens) antibodies in a significant proportion of CD patients would suggest a causal role for the organism in CD.


Subject(s)
Antigens, Bacterial/immunology , Crohn Disease/immunology , Mycobacterium avium subsp. paratuberculosis/immunology , Adolescent , Adult , Aged , Animals , Antigens, Bacterial/genetics , Cattle , Cross Reactions , Electrophoresis, Polyacrylamide Gel , Humans , Middle Aged , Molecular Weight , Mycobacterium avium subsp. paratuberculosis/genetics , Paratuberculosis/immunology , Rabbits
14.
Vet Microbiol ; 77(3-4): 513-8, 2000 Dec 20.
Article in English | MEDLINE | ID: mdl-11118736

ABSTRACT

Cell wall deficient forms of mycobacteria may be important in the pathogenesis of Crohn's disease and sarcoidosis. However, no method has been available to localize this type of organisms in tissue sections. We developed an in situ hybridization method for the demonstration of Mycobacterium paratuberculosis spheroplasts (cell wall deficient forms) in paraffin embedded tissue sections.M. paratuberculosis spheroplasts were prepared by treatment with glycine and lysozyme. Pieces of beef were injected with the prepared spheroplasts. The samples were fixed in buffered formalin and paraffin embedded. A M. paratuberculosis-specific probe derived from the IS900 gene was used. Specificity was controlled by using an irrelevant probe and by hybridizing sections with spheroplasts from other bacteria. Beef samples injected with M. paratuberculosis spheroplasts were the only samples that hybridized with the probe. Beef samples containing acid-fast or spheroplast forms of M. smegmatis and M. tuberculosis as well as the acid-fast forms of M. paratuberculosis did not hybridize with the probe. Unrelated bacterial controls, i.e. Helicobacter pylori and Escherichia coli were also negative in the assay. In situ hybridization with the IS900 probe provides a specific way to localize M. paratuberculosis spheroplasts in tissue sections and may be useful for studies of the connection between M. paratuberculosis and Crohn's disease and sarcoidosis. The assay may also be valuable for studies on Johne's diseased animals.


Subject(s)
In Situ Hybridization/methods , Mycobacterium avium subsp. paratuberculosis/classification , Mycobacterium avium subsp. paratuberculosis/genetics , Spheroplasts/genetics , Animals , Cattle , Crohn Disease/etiology , Crohn Disease/microbiology , Glycine , Humans , Meat/microbiology , Muramidase , Sarcoidosis/etiology , Sarcoidosis/microbiology , Spheroplasts/chemistry , Spheroplasts/pathogenicity
15.
J Chemother ; 14(6): 627-30, 2002 Dec.
Article in English | MEDLINE | ID: mdl-12583556

ABSTRACT

A 65-year old diabetic male presented with progressive bone destruction of thoracic spine (T-11&12) with cord compression. Candida albicans was isolated from aspirated materials pre-and intra-operative. Two weeks of fluconazole was given prior to surgical debridement, and fixation of the lesion. C. albicans isolated pre-and 2-weeks after fluconazole treatment were DNA-typed using AP-PCR. MIC was 2-4 mg/l in all isolates tested. The pre-and post treatment isolates had two DNA patterns, indicating the existence of two different strains. Surgical treatment was necessary for patient recovery.


Subject(s)
Antifungal Agents/therapeutic use , Candida albicans/genetics , Candidiasis/therapy , Fluconazole/therapeutic use , Osteomyelitis/therapy , Spondylitis/therapy , Thoracic Vertebrae , Aged , Candidiasis/complications , Candidiasis/microbiology , DNA Fingerprinting , DNA, Fungal , Debridement , Diabetes Mellitus, Type 1/complications , Humans , Male , Osteomyelitis/complications , Osteomyelitis/microbiology , Spinal Cord Compression/complications , Spondylitis/complications , Spondylitis/microbiology
16.
Article in English | MEDLINE | ID: mdl-7621027

ABSTRACT

Helicobacter pylori is now generally accepted as a key etiologic agent in peptic ulcer disease as well as in gastric cancer. Dental plaque has been implicated as a possible source of H. pylori by studies that used culture, biochemical, nucleic acid, and immunologic analyses. Variation in the sensitivities of detection by these different reported assays may reflect the methods used, technical difficulties, microbiota complexes, geographic distribution, and host response. The finding of H. pylori in dental plaque also suggested that dental workers may be at increased risk of acquiring H. pylori infection from occupational exposure. We review the available data concerning the presence of this important pathogen in the oral cavity and its potential to be acquired by dental workers. Knowledge of this organism's route of transmission may aid in the development of therapeutic procedures to stop its potential spread.


Subject(s)
Dental Plaque/microbiology , Helicobacter Infections/transmission , Helicobacter pylori/isolation & purification , Dental Staff , Dentistry , Humans , Occupational Exposure
17.
J Clin Microbiol ; 31(1): 61-5, 1993 Jan.
Article in English | MEDLINE | ID: mdl-8417034

ABSTRACT

Detection of Mycobacterium tuberculosis in clinical specimens by the polymerase chain reaction (PCR) was compared with detection by culture. A 317-bp segment within the M. tuberculosis-specific insertion sequence IS6110 was amplified. The detection limit of the PCR assay for cultured mycobacteria was 50 cells per reaction by ethidium bromide-stained agarose gel electrophoresis and 5 cells per reaction by hybridization with an oligonucleotide probe conjugated with either digoxigenin or alkaline phosphatase (AP). This sensitivity was reduced fivefold in sputum specimens seeded with M. tuberculosis. Seventy-six clinical specimens were amplified and examined by the three detection methods. Both the digoxigenin and AP procedures were found to be more sensitive than agarose gel electrophoresis, but they were occasionally associated with a high background. An additional 308 specimens were examined only by agarose gel electrophoresis and the AP procedure. Of 71 specimens found to contain M. tuberculosis, amplified products were detected from 56 (79%) samples by agarose gel electrophoresis and/or the AP procedure. Of the additional 313 specimens that were culture negative for M. tuberculosis, 19 (6%) had amplified products detectable by agarose gel electrophoresis and/or the AP procedure. Compared with culture, PCR showed sensitivities and specificities of 55 and 98%, respectively, for agarose gel electrophoresis and 74 and 95%, respectively, for the AP procedure. Despite this low sensitivity, a rapid positive PCR result was accurate and clinically useful.


Subject(s)
Mycobacterium tuberculosis/isolation & purification , Polymerase Chain Reaction/methods , Alkaline Phosphatase , Base Sequence , Blotting, Southern , Colony Count, Microbial , DNA, Bacterial/genetics , Digoxigenin , Electrophoresis, Agar Gel/methods , False Positive Reactions , Humans , Molecular Sequence Data , Mycobacterium tuberculosis/genetics , Nucleic Acid Hybridization/methods , Oligonucleotide Probes , Sensitivity and Specificity , Sputum/microbiology
18.
Dig Dis Sci ; 45(3): 445-56, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10749316

ABSTRACT

The most commonly used antibiotics in Crohn's disease are nitroimidazoles and macrolides often combined with corticosteroids or sulfasalazine. There has been interest in a mycobacterial involvement in Crohn's disease since its earliest description. It is not recognized that Mycobacterium avium subspecies paratuberculosis, a proven but uncommon cause of human disease, is widespread in the human food chain especially in dairy products and beef. M. paratuberculosis has been identified in tissues from a higher proportion of Crohn's disease patients than controls, suggesting that it may be one of the causes of Crohn's disease. We review the large number of antibiotic trials in Crohn's disease. Although studies have been performed with many different protocols and variations in the definition of success, preliminary reports of multiple drug therapies are encouraging. Nevertheless, large-well designed preferably placebo-controlled studies are needed before one could recommend such therapy.


Subject(s)
Crohn Disease/drug therapy , Paratuberculosis/drug therapy , Anti-Bacterial Agents/therapeutic use , Clinical Trials as Topic , Crohn Disease/microbiology , Humans
19.
J Clin Microbiol ; 35(7): 1794-9, 1997 Jul.
Article in English | MEDLINE | ID: mdl-9196196

ABSTRACT

Johne's disease is a chronic enteritis of ruminants associated with enormous worldwide economic losses for the dairy cow- and goat-rearing industries. Management limitations and eradication programs for this disease have been hampered by the lack of a simple and specific diagnostic test for the detection of subclinical cases. We used a recombinant clone expressing a 35,000-molecular-weight Mycobacterium paratuberculosis antigen (p35 antigen) from a previously constructed expression library of M. paratuberculosis in Escherichia coli. The DNA fragment encoding the p35 gene hybridized only to DNA from Mycobacterium avium complex, but not to DNAs from other mycobacteria and nonmycobacterial organisms. The seroreactivity of p35 was evaluated by immunoblotting against 57 reference serum samples obtained from infected and uninfected animals. p35 was recognized by sera from 100% of animals with advanced Johne's disease (clinical stage) (12 cattle, 2 goats, and 2 sheep) and by sera from 75% of 20 cattle with early infection (subclinical stage). None of the sera from 15 M. paratuberculosis-free cows, 3 Mycobacterium bovis BCG-infected tuberculous cattle, or 3 cows artificially inoculated with multiple doses of viable M. paratuberculosis reacted with p35. The overall sensitivity, specificity, positive predictive value, and negative predictive value were 86, 100, 100, and 75%, respectively. The accuracy of p35 immunoblotting was superior to those of commercially available diagnostic tests for Johne's disease. These results suggest that the p35 recombinant protein has potential for use in the serodiagnosis of animals with Johne's disease at all stages of infection. The DNA fragment encoding p35 may also serve as a probe for identification of M. avium complex infection.


Subject(s)
Antigens, Bacterial/genetics , DNA, Bacterial/genetics , DNA, Recombinant/genetics , Mycobacterium avium subsp. paratuberculosis/genetics , Paratuberculosis/microbiology , Serotyping/methods , Animals , Antigens, Bacterial/immunology , Cattle , Mycobacterium avium subsp. paratuberculosis/isolation & purification
20.
Scand J Infect Dis ; 29(2): 202-4, 1997.
Article in English | MEDLINE | ID: mdl-9181662

ABSTRACT

The etiology of sarcoidosis is unknown, but it has long been suspected to be mycobacterial. In the present study, we used 4 mycobacterial species-specific polymerase chain reaction assays on cerebrospinal fluid obtained from a patient with neurosarcoidosis. Positive hybridization was observed with both the Mycobacterium avium complex probe and the insertion element IS900-specific probe that has been found in M. paratuberculosis species. There was no hybridization with M. tuberculosis or M. avium woodpigeon strain-specific probes. This case report demonstrates that M. paratuberculosis or some closely related M. avium spp which perhaps also carry IS900, or contain closely related DNA sequences, are associated with at least some cases of sarcoidosis disease.


Subject(s)
Mycobacterium avium Complex , Mycobacterium avium-intracellulare Infection/cerebrospinal fluid , Sarcoidosis/microbiology , Adult , Central Nervous System Diseases/cerebrospinal fluid , Central Nervous System Diseases/microbiology , Female , Humans , Mycobacterium avium-intracellulare Infection/microbiology , Polymerase Chain Reaction , Sarcoidosis/cerebrospinal fluid
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