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1.
Int J Mol Sci ; 20(20)2019 Oct 17.
Article in English | MEDLINE | ID: mdl-31627404

ABSTRACT

Necessitated by the subzero temperatures and seasonal exposure to ice, various organisms have developed a remarkably effective means to survive the harsh climate of their natural habitats. Their ice-binding (glyco)proteins keep the nucleation and growth of ice crystals in check by recognizing and binding to specific ice crystal faces, which arrests further ice growth and inhibits ice recrystallization (IRI). Inspired by the success of this adaptive strategy, various approaches have been proposed over the past decades to engineer materials that harness these cryoprotective features. In this review we discuss the prospects and challenges associated with these advances focusing in particular on peptidic antifreeze materials both identical and akin to natural ice-binding proteins (IBPs). We address the latest advances in their design, synthesis, characterization and application in preservation of biologics and foods. Particular attention is devoted to insights in structure-activity relations culminating in the synthesis of de novo peptide analogues. These are sequences that resemble but are not identical to naturally occurring IBPs. We also draw attention to impactful developments in solid-phase peptide synthesis and 'greener' synthesis routes, which may aid to overcome one of the major bottlenecks in the translation of this technology: unavailability of large quantities of low-cost antifreeze materials with excellent IRI activity at (sub)micromolar concentrations.


Subject(s)
Antifreeze Proteins/chemistry , Freezing , Acclimatization , Antifreeze Proteins/metabolism , Antifreeze Proteins/physiology , Biomimetics , Cryoprotective Agents/chemistry , Crystallization , Ice
2.
Mar Drugs ; 15(10)2017 Oct 18.
Article in English | MEDLINE | ID: mdl-29057803

ABSTRACT

Antifreeze proteins (AFPs) protecting the cells against freezing are produced in response to extremely low temperatures in diverse psychrophilic organisms, and they are encoded by multiple gene families. The AFP of Antarctic marine diatom Chaetoceros neogracile is reported in our previous research, but like other microalgae, was considered to probably have additional genes coding AFPs. In this paper, we reported the cloning and characterization of additional AFP gene from C. neogracile (Cn-isoAFP). Cn-isoAFP protein is 74.6% identical to the previously reported Cn-AFP. The promoter sequence of Cn-isoAFP contains environmental stress responsive elements for cold, thermal, and high light conditions. Cn-isoAFP transcription levels increased dramatically when cells were exposed to freezing (-20 °C), thermal (10 °C), or high light (600 µmol photon m-2 s-1) stresses. The thermal hysteresis (TH) activity of recombinant Cn-isoAFP was 0.8 °C at a protein concentration of 5 mg/mL. Results from homology modeling and TH activity analysis of site-directed mutant proteins elucidated AFP mechanism to be a result of flatness of B-face maintained via hydrophobic interactions.


Subject(s)
Antifreeze Proteins/physiology , Diatoms/physiology , Freezing/adverse effects , Protein Isoforms/physiology , Antarctic Regions , Antifreeze Proteins/chemistry , Cloning, Molecular , Hydrophobic and Hydrophilic Interactions , Models, Molecular , Mutagenesis, Site-Directed , Promoter Regions, Genetic/genetics , Protein Isoforms/chemistry , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Response Elements/genetics , Sequence Homology, Amino Acid , Stress, Physiological/physiology
3.
J Exp Biol ; 218(Pt 12): 1834-45, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26085661

ABSTRACT

Antarctic notothenioids dominate the fish fauna of the Southern Ocean. Evolution for millions of years at cold and stable temperatures has led to the acquisition of numerous biochemical traits that allow these fishes to thrive in sub-zero waters. The gain of antifreeze glycoproteins has afforded notothenioids the ability to avert freezing and survive at temperatures often hovering near the freezing point of seawater. Additionally, possession of cold-adapted proteins and membranes permits them to sustain appropriate metabolic rates at exceptionally low body temperatures. The notothenioid genome is also distinguished by the disappearance of traits in some species, losses that might prove costly in a warmer environment. Perhaps the best-illustrated example is the lack of expression of hemoglobin in white-blooded icefishes from the family Channichthyidae. Loss of key elements of the cellular stress response, notably the heat shock response, has also been observed. Along with their attainment of cold tolerance, notothenioids have developed an extreme stenothermy and many species perish at temperatures only a few degrees above their habitat temperatures. Thus, in light of today's rapidly changing climate, it is critical to evaluate how these extreme stenotherms will respond to rising ocean temperatures. It is conceivable that the remarkable cold specialization of notothenioids may ultimately leave them vulnerable to future thermal increases and threaten their fitness and survival. Within this context, our review provides a current summary of the biochemical losses and gains that are known for notothenioids and examines these cold-adapted traits with a focus on processes underlying thermal tolerance and acclimation capacity.


Subject(s)
Cold Temperature , Fishes/physiology , Adaptation, Physiological , Animals , Antarctic Regions , Antifreeze Proteins/physiology , Biological Evolution , Fishes/genetics , Heat-Shock Response , Hemoglobins/metabolism
4.
Proc Natl Acad Sci U S A ; 109(9): 3434-9, 2012 Feb 28.
Article in English | MEDLINE | ID: mdl-22331888

ABSTRACT

The Southern Ocean around Antarctica is among the most rapidly warming regions on Earth, but has experienced episodic climate change during the past 40 million years. It remains unclear how ancient periods of climate change have shaped Antarctic biodiversity. The origin of antifreeze glycoproteins (AFGPs) in Antarctic notothenioid fishes has become a classic example of how the evolution of a key innovation in response to climate change can drive adaptive radiation. By using a time-calibrated molecular phylogeny of notothenioids and reconstructed paleoclimate, we demonstrate that the origin of AFGP occurred between 42 and 22 Ma, which includes a period of global cooling approximately 35 Ma. However, the most species-rich lineages diversified and evolved significant ecological differences at least 10 million years after the origin of AFGPs, during a second cooling event in the Late Miocene (11.6-5.3 Ma). This pattern indicates that AFGP was not the sole trigger of the notothenioid adaptive radiation. Instead, the bulk of the species richness and ecological diversity originated during the Late Miocene and into the Early Pliocene, a time coincident with the origin of polar conditions and increased ice activity in the Southern Ocean. Our results challenge the current understanding of the evolution of Antarctic notothenioids suggesting that the ecological opportunity that underlies this adaptive radiation is not linked to a single trait, but rather to a combination of freeze avoidance offered by AFGPs and subsequent exploitation of new habitats and open niches created by increased glacial and ice sheet activity.


Subject(s)
Antifreeze Proteins/genetics , Biodiversity , Biological Evolution , Climate Change , Perciformes/physiology , Adaptation, Physiological , Amino Acid Sequence , Animals , Antarctic Regions , Antifreeze Proteins/physiology , Bayes Theorem , Cold Temperature , DNA/genetics , DNA, Mitochondrial/genetics , Genetic Variation , Likelihood Functions , Oceans and Seas , Perciformes/classification , Perciformes/genetics , Phylogeny , Sequence Alignment
5.
Bioessays ; 33(4): 260-8, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21290397

ABSTRACT

Current climate change has raised concerns over the fate of the stenothermal Antarctic marine fauna (animals that evolved to live in narrow ranges of cold temperatures). The present paper focuses on Notothenioidei, a taxonomic group that dominates Antarctic fish. Notothenioids evolved in the Southern Ocean over the last 20 million years, providing an example of a marine species flock with unique adaptations to the cold at morphological, physiological and biochemical levels. Their phenotypic modifications are often accompanied by 'irreversible' genomic losses or gene amplifications. On a micro-evolutionary scale, relatively 'shallow' genetic variation is observed, on account of past fluctuations in population size, and a significant genetic structure is evident, suggesting low population connectivity. These features suggest that Antarctic fish might have relatively little potential to adapt to global warming, at least at a genetic level. The extent of their phenotypic plasticity, which is evident to some degree, awaits further research.


Subject(s)
Adaptation, Physiological , Biological Evolution , Cold Temperature , Perciformes/physiology , Animals , Antarctic Regions , Antifreeze Proteins/physiology , Cold Climate , Globins/genetics , Heat-Shock Response , Oceans and Seas , Oxidative Stress , Perciformes/genetics , Phylogeny
6.
J Mol Evol ; 71(2): 111-8, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20686757

ABSTRACT

Antifreeze proteins (AFPs) have independently evolved in many organisms. AFPs act by binding to ice crystals, effectively lowering the freezing point. AFPs are often at high copy number in a genome and diversity exists between copies. Type III antifreeze proteins are found in Arctic and Antarctic eel pouts, and have previously been shown to evolve under positive selection. Here we combine molecular and proteomic techniques to understand the molecular evolution and diversity of Type III antifreeze proteins in a single individual Antarctic fish Lycodichthys dearborni. Our expressed sequence tag (EST) screen reveals that at least seven different AFP variants are transcribed, which are ultimately translated into five different protein isoforms. The isoforms have identical 66 base pair signal sequences and different numbers of subsequent ice-binding domains followed by a stop codon. Isoforms with one ice-binding unit (monomer), two units (dimer), and multiple units (multimer) were present in the EST library. We identify a previously uncharacterized protein dimer, providing further evidence that there is diversity between Type III AFP isoforms, perhaps driven by positive selection for greater thermal hysteresis. Proteomic analysis confirms that several of these isoforms are translated and present in the liver. Our molecular evolution study shows that paralogs have diverged under positive selection. We hypothesize that antifreeze protein diversity is an important contributor to depressing the serum freezing point.


Subject(s)
Antifreeze Proteins/genetics , Evolution, Molecular , Genetic Variation , Perciformes/genetics , Amino Acid Sequence , Animals , Antarctic Regions , Antifreeze Proteins/chemistry , Antifreeze Proteins/metabolism , Antifreeze Proteins/physiology , Expressed Sequence Tags , Genetic Variation/physiology , Genome , Models, Molecular , Molecular Sequence Data , Perciformes/metabolism , Sequence Homology
7.
Biomolecules ; 10(12)2020 12 09.
Article in English | MEDLINE | ID: mdl-33317024

ABSTRACT

Antifreeze proteins (AFPs) are specific proteins, glycopeptides, and peptides made by different organisms to allow cells to survive in sub-zero conditions. AFPs function by reducing the water's freezing point and avoiding ice crystals' growth in the frozen stage. Their capability in modifying ice growth leads to the stabilization of ice crystals within a given temperature range and the inhibition of ice recrystallization that decreases the drip loss during thawing. This review presents the potential applications of AFPs from different sources and types. AFPs can be found in diverse sources such as fish, yeast, plants, bacteria, and insects. Various sources reveal different α-helices and ß-sheets structures. Recently, analysis of AFPs has been conducted through bioinformatics tools to analyze their functions within proper time. AFPs can be used widely in various aspects of application and have significant industrial functions, encompassing the enhancement of foods' freezing and liquefying properties, protection of frost plants, enhancement of ice cream's texture, cryosurgery, and cryopreservation of cells and tissues. In conclusion, these applications and physical properties of AFPs can be further explored to meet other industrial players. Designing the peptide-based AFP can also be done to subsequently improve its function.


Subject(s)
Agriculture/methods , Antifreeze Proteins/chemistry , Antifreeze Proteins/physiology , Cryopreservation/methods , Food Technology/methods , Animals , Antifreeze Proteins/classification , Bacteria/metabolism , Computational Biology/methods , Cryosurgery/methods , Crystallization , Fishes/metabolism , Freezing , Fungi/metabolism , Humans , Ice/analysis , Insecta/metabolism , Plants/metabolism , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand
8.
Biochemistry ; 48(40): 9696-703, 2009 Oct 13.
Article in English | MEDLINE | ID: mdl-19746966

ABSTRACT

Antifreeze proteins (AFPs) can produce a difference between the nonequilibrium freezing point and the melting point, termed thermal hysteresis (TH). The TH activity of an antifreeze protein (AFP) depends on the specific AFP and its concentration as well as the presence of cosolutes including low molecular mass solutes and/or proteins. We recently identified series of carboxylates and polyols as efficient enhancers for an AFP from the beetle Dendroides canadensis. In this study, we chemically modified DAFP-1 using the arginine-specific reagent 1,2-cyclohexanedione. We demonstrated that 1,2-cyclohexanedione specifically modifies one arginine residue and the modified DAFP-1 loses its enhancing ability completely or partially in the presence of previously identified enhancers. The stronger the enhancement ability of the enhancer on the native DAFP-1, the stronger the enhancement effect of the enhancer on the modified DAFP-1. The weaker enhancers (e.g., glycerol) completely lose their enhancement effect on the modified DAFP-1 due to their inability to compete with 1,2-cyclohexanedione for the arginine residue. Regeneration of the arginine residue using hydroxylamine fully restored the enhancing ability of DAFP-1. These studies indicated that an arginine residue is critical for the enhancing ability of DAFP-1 and the guanidinium group of the arginine residue is important for its interaction with the enhancers, where the general mechanism of arginine-ligand interaction is borne. This work may initiate a complete mechanistic study of the enhancement effect in AFPs.


Subject(s)
Antifreeze Proteins/chemistry , Arginine/chemistry , Coleoptera/chemistry , Amino Acid Sequence , Animals , Antifreeze Proteins/antagonists & inhibitors , Antifreeze Proteins/physiology , Arginine/antagonists & inhibitors , Arginine/physiology , Coleoptera/drug effects , Coleoptera/physiology , Cyclohexanones/pharmacology , Molecular Sequence Data
9.
Plant Cell Environ ; 32(4): 336-48, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19143989

ABSTRACT

Antarctic hair grass (Deschampsia antarctica E. Desv.), the only grass indigenous to Antarctica, has well-developed freezing tolerance, strongly induced by cold acclimation. Here, we show that in response to low temperatures, D. antarctica expresses potent recrystallization inhibition (RI) activity that, inhibits the growth of small ice crystals into potentially damaging large ones, is proteinaceous and localized to the apoplasm. A gene family from D. antarctica encoding putative homologs of an ice recrystallization inhibition protein (IRIP) has been isolated and characterized. IRIPs are apoplastically targeted proteins with two potential ice-binding motifs: 1-9 leucine-rich repeats (LRRs) and c. 16 'IRIP' repeats. IRIP genes appear to be confined to the grass subfamily Pooideae and their products, exhibit sequence similarity to phytosulphokine receptors and are predicted to adopt conformations with two ice-binding surfaces. D. antarctica IRIP (DaIRIP) transcript levels are greatly enhanced in leaf tissue following cold acclimation. Transgenic Arabidopsis thaliana expressing a DaIRIP has novel RI activity, and purified DaIRIP, when added back to extracts of leaves from non-acclimated D. antarctica, can reconstitute the activity found in acclimated plants. We propose that IRIP-mediated RI activity may contribute to the cryotolerance of D. antarctica, and thus to its unique ability to have colonized Antarctica.


Subject(s)
Antifreeze Proteins/genetics , Cold Temperature , Multigene Family , Plant Leaves/physiology , Plant Proteins/genetics , Poaceae/genetics , Acclimatization/genetics , Amino Acid Sequence , Antarctic Regions , Antifreeze Proteins/physiology , Arabidopsis/genetics , Cloning, Molecular , DNA, Plant/genetics , Freezing , Gene Expression Regulation, Plant , Genes, Plant , Ice , Molecular Sequence Data , Plant Leaves/genetics , Plant Proteins/physiology , Plants, Genetically Modified/genetics , Plants, Genetically Modified/physiology , Poaceae/physiology , Sequence Alignment , Sequence Analysis, DNA
10.
Sci Rep ; 9(1): 6246, 2019 05 15.
Article in English | MEDLINE | ID: mdl-31092839

ABSTRACT

Ice-binding proteins (IBPs) are capable of binding ice crystals and inhibiting their growth at freezing temperatures. IBPs are also thought to stabilize the cell membrane at non-freezing temperatures near 0 °C. These two effects have been assumed to reduce cold- and freezing-induced damage to cells and tissues. However, knowledge regarding the effects of IBP on the living animals is limited. Here, we characterized the relationship between the IBP effects and the physiological role by using the nematode Caenorhabditis elegans. The expression of fish (NfeIBPs)- and fungus-derived IBPs (AnpIBPs and TisIBP8) in C. elegans improved its survival rate during exposure to 0 and -2 °C (cold shock) and -5 °C (freezing). The observed cold tolerance of C. elegans after cold shock is attributable to the stabilization of cell-membrane lipids with IBPs, and the freezing tolerance at -5 °C can be attributed to the inhibition of ice-crystal growth by the IBPs. Significantly, the survival rate of C. elegans at -5 °C was improved by expression of wild-type AnpIBP and maximized by that of TisIBP8, whereas it was lowered when a defective AnpIBP mutant was expressed. These results suggest that the ice-binding ability of IBP has a good correlation with the survival rate of C. elegans during freezing.


Subject(s)
Antifreeze Proteins/physiology , Caenorhabditis elegans/physiology , Cold-Shock Response , Acclimatization , Animals , Fish Proteins/physiology , Freezing , Fungal Proteins/physiology , Ice , Recombinant Proteins
11.
J Insect Physiol ; 112: 68-72, 2019 01.
Article in English | MEDLINE | ID: mdl-30562493

ABSTRACT

Paradoxically, some insects have an increased capacity to survive higher temperatures in winter than summer. Possible contributors to this increased heat tolerance in winter could be their sub-zero adaptations (high polyol concentrations, antifreeze proteins, antifreeze glycolipids, etc.). To investigate if a sub-zero adaptation can increase organismal high temperature survivorship, we tested transgenic fruit flies, Drosophila melanogaster, with antifreeze proteins from the fire-colored beetle, Dendroides canadensis (DAFPs). Transgenic Drosophila melanogaster with individual DAFPs-1 and -4 had increased survivorship compared to control flies after 24 h when placed at 35-36.5 °C. The 24 h ULT50 (Upper Lethal Temperature at which 50% mortality occurred) was calculated to be 36.3 °C for DAFP-1 flies, 36.2 °C for DAFP-4 flies, 35.4 °C for wild-type controls, and 34.9 °C for GAL4 controls. The results indicate that DAFPs may have an alternative function in insects and be a contributor in the unexpected phenomenon of increased higher temperature survivorship in winter.


Subject(s)
Antifreeze Proteins/physiology , Coleoptera/genetics , Drosophila melanogaster/physiology , Hot Temperature , Insect Proteins/physiology , Animals , Animals, Genetically Modified/physiology , Female , Male
12.
Mol Reprod Dev ; 75(4): 608-13, 2008 Apr.
Article in English | MEDLINE | ID: mdl-17874447

ABSTRACT

The purpose of the present study was to evaluate the cryogenic effect of antifreeze protein (AFP) on transgenic mouse ovaries which is expressed AFP type III from Ocean pout and the production of live offspring by orthotopic transplantation of cryopreserved mouse ovaries. In this study, whole transgenic and nontransgenic mouse ovaries were vitrified with 20% DMSO and 20% EG in M2 medium supplemented with 0.5 M sucrose. All vitrified and toxicity control and fresh ovaries were transplanted orthotopically into ovariectomized recipients bilaterally. For fresh ovaries transplantation, 5 mice delivered litters of 18 and 19 live pups in first and second matings, respectively. For toxicity control of chemicals, 6 mice delivered litters of 22 and 23 live pups. For nontransgenic mouse ovaries (vitrified) transplantation, 7 mice delivered litters of 22 and 23 live pups. For transgenic mouse ovaries (vitrified) transplantation, 10 mice delivered litters of 35 and 37 live pups. Litter sizes from pups of freshly transplanted ovaries were not significantly different from AFP-transplanted transgenic ovaries but those from nontransgenic-transplanted ovaries were significantly different from the AFP-transplanted transgenic ovaries group (P < 0.05). In this study, for the first time, it was shown that the ovarian tissue of AFP transgenic mice was protected from cryopreservation by vitrification. These results demonstrate that a normal reproductive lifespan can be restored by orthotopic transplantation of AFP transgenic-vitrified ovary.


Subject(s)
Antifreeze Proteins/physiology , Cryopreservation , Freezing , Organ Preservation , Ovary/transplantation , Animals , Animals, Newborn , Antifreeze Proteins/biosynthesis , Antifreeze Proteins/genetics , Cryopreservation/methods , Female , Male , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Transgenic , Ovary/cytology , Ovary/metabolism , Perciformes/genetics
13.
Cryobiology ; 57(2): 122-9, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18703038

ABSTRACT

Antifreeze proteins are a structurally diverse group of proteins characterized by their unique ability to cause a separation of the melting- and growth-temperatures of ice. These proteins have evolved independently in different kinds of cold-adapted ectothermic animals, including insects and fish, where they protect against lethal freezing of the body fluids. There is a great variability in the capacity of different kinds of antifreeze proteins to evoke the antifreeze effect, but the basis of these differences is not well understood. This study reports on salt-induced enhancement of the antifreeze activity of an antifreeze protein from the longhorn beetle Rhagium inquisitor (L.). The results imply that antifreeze activity is predetermined by a steady-state distribution of the antifreeze protein between the solution and the ice surface region. The observed salt-induced enhancement of the antifreeze activity compares qualitatively and quantitatively with salt-induced lowering of protein solubility. Thus, salts apparently enhance antifreeze activity by evoking a solubility-induced shift in the distribution pattern of the antifreeze proteins in favour of the ice. These results indicate that the solubility of antifreeze proteins in the solution surrounding the ice crystal is a fundamental physiochemical property in relation to their antifreeze potency.


Subject(s)
Antifreeze Proteins/physiology , Coleoptera/chemistry , Salts/chemistry , Animals , Antifreeze Proteins/chemistry , Crystallization , Hemolymph/chemistry , Hemolymph/metabolism , Ice , Models, Biological , Protein Binding , Solubility
14.
Biol Rev Camb Philos Soc ; 93(4): 1891-1914, 2018 11.
Article in English | MEDLINE | ID: mdl-29749114

ABSTRACT

Freeze tolerance - the ability to survive internal ice formation - has evolved repeatedly in insects, facilitating survival in environments with low temperatures and/or high risk of freezing. Surviving internal ice formation poses several challenges because freezing can cause cellular dehydration and mechanical damage, and restricts the opportunity to metabolise and respond to environmental challenges. While freeze-tolerant insects accumulate many potentially protective molecules, there is no apparent 'magic bullet' - a molecule or class of molecules that appears to be necessary or sufficient to support this cold-tolerance strategy. In addition, the mechanisms underlying freeze tolerance have been minimally explored. Herein, we frame freeze tolerance as the ability to survive a process: freeze-tolerant insects must withstand the challenges associated with cooling (low temperatures), freezing (internal ice formation), and thawing. To do so, we hypothesise that freeze-tolerant insects control the quality and quantity of ice, prevent or repair damage to cells and macromolecules, manage biochemical processes while frozen/thawing, and restore physiological processes post-thaw. Many of the molecules that can facilitate freeze tolerance are also accumulated by other cold- and desiccation-tolerant insects. We suggest that, when freezing offered a physiological advantage, freeze tolerance evolved in insects that were already adapted to low temperatures or desiccation, or in insects that could withstand small amounts of internal ice formation. Although freeze tolerance is a complex cold-tolerance strategy that has evolved multiple times, we suggest that a process-focused approach (in combination with appropriate techniques and model organisms) will facilitate hypothesis-driven research to understand better how insects survive internal ice formation.


Subject(s)
Freezing , Insecta/physiology , Acclimatization , Animals , Antifreeze Proteins/physiology , Biological Evolution , Insecta/genetics
15.
Syst Biol Reprod Med ; 64(6): 403-416, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30176752

ABSTRACT

Antifreeze proteins (AFPs) protect marine fishes from freezing in icy seawater. They evolved relatively recently, most likely in response to the formation of sea ice and Cenozoic glaciations that occurred less than 50 million years ago, following a greenhouse Earth event. Based on their diversity, AFPs have independently evolved on many occasions to serve the same function, with some remarkable examples of convergent evolution at the structural level, and even instances of lateral gene transfer. For some AFPs, the progenitor gene is recognizable. The intense selection pressure exerted by icy seawater, which can rapidly kill unprotected fish, has led to massive AFP gene amplification, as well as some partial gene duplications that have increased the size and activity of the antifreeze. The many protein evolutionary processes described in Gordon H. Dixon's Essays in Biochemistry article will be illustrated here by examples from studies on AFPs. Abbreviations: AFGP: antifreeze glycoproteins; AFP: antifreeze proteins; GHD: Gordon H. Dixon; SAS: sialic acid synthase; TH: thermal hysteresis.


Subject(s)
Antifreeze Proteins/physiology , Evolution, Molecular , Fishes/physiology , Animals , Cryopreservation , DNA Copy Number Variations , Gene Amplification , Gene Expression Regulation , Ice , Oxo-Acid-Lyases/genetics , Spermatogenesis
16.
Curr Biol ; 27(11): R550-R557, 2017 Jun 05.
Article in English | MEDLINE | ID: mdl-28586692

ABSTRACT

The world's oceans are home to many fantastic creatures, including about 16,000 species of actinopterygian, or ray-finned, fishes. Notably, 85% of marine fish species come from a single actinopterygian subgroup, the acanthomorph or spiny-rayed fishes. Here, we review eight functional innovations found in marine acanthomorphs that have been instrumental in the adaptive radiation of this group in the marine realm. Jaw protrusion substantially enhances the suction feeding mechanism found in all fish. Fin spines serve as a major deterrent to predators and enhance the locomotor function of fins. Pharyngognathy, a specialization of the second pair of jaws in the pharynx, enhances the ability of fishes to process hard and tough prey. Endothermy allows fishes to function at high levels of physiological performance in cold waters and facilitates frequent movement across strong thermal gradients found in the open ocean. Intramandibular joints enhance feeding for fishes that bite and scrape prey attached to hard surfaces. Antifreeze proteins prevent ice crystal growth in extracellular fluids, allowing fish to function in cold waters that would otherwise freeze them. Air-breathing allowed fishes at the water's edge to exploit terrestrial habitats. Finally, bioluminescence functions in communication, attracting prey and in hiding from predators, particularly for fishes of the deep ocean. All of these innovations have evolved multiple times in fishes. The frequent occurrence of convergent evolution of these complex functional novelties speaks to the persistence and potency of the selective forces in marine environments that challenge fishes and stimulate innovation.


Subject(s)
Biological Evolution , Feeding Behavior/psychology , Fishes/physiology , Oceans and Seas , Predatory Behavior/physiology , Acclimatization/physiology , Animals , Antifreeze Proteins/physiology , Biodiversity , Biomechanical Phenomena , Cold Temperature/adverse effects , Fishes/anatomy & histology , Jaw/anatomy & histology , Jaw/physiology , Luminescence , Phylogeny
17.
Curr Protein Pept Sci ; 7(6): 509-22, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17168784

ABSTRACT

Antifreeze proteins (AFPs) and antifreeze glycoproteins (AFGPs), found in the body fluids of many species of polar fish allow them to survive in waters colder than the equilibrium freezing point of their blood and other internal fluids. Despite their structural diversity, all AF(G)Ps kinetically depress the temperature at which ice grows in a non-colligative manner and hence exhibit thermal hysteresis. AF(G)Ps also share the ability to interact with and protect mammalian cells and tissues from hypothermic damage (e.g., improved storage of human blood platelets at low temperatures), and are able to stabilize or disrupt membrane composition during low temperature and freezing stress (e.g., cryoprotectant properties in stabilization of sperm and oocytes). This review will summarize studies of AFPs with phospholipids and plant lipids, proposed mechanisms for inhibition of leakage from membranes, and cryoprotectant studies with biological samples. The major focus will be on the alpha-helical type I antifreeze proteins, and synthetic mutants, that have been most widely studied. For completeness, data on glycoproteins will also be presented. While a number of models to explain stabilization and destabilization of different lipid systems have been proposed, it is currently not possible to predict whether a particular AFP will stabilize or destabilize a given lipid system. Furthermore the relationship between the antifreeze property of thermal hysteresis and membrane stabilization is unknown. This lack of detailed knowledge about how AFPs function in the presence of different types of materials has hampered progress toward the development of antifreezes for cold storage of cells, tissues, and organs.


Subject(s)
Antifreeze Proteins/physiology , Membranes, Artificial , Models, Molecular , Animals
18.
J Insect Physiol ; 52(8): 888-96, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16828791

ABSTRACT

Antifreeze protein 1 (DAFP-1), from the beetle Dendroides canadensis, was expressed in Drosophila melanogaster. Mean thermal hysteresis values (the difference between freezing and melting points), indicative of antifreeze protein activity, in the hemolymph of transgenic flies were found to be as high as 6.23+/-0.10 degrees C (using the nanoliter osmometer). Direct comparisons of the capillary and nanoliter osmometer techniques for measuring THA were made, illustrating the much higher values obtained by the latter. Transgenic Drosophila had supercooling points, both in contact with ice and not, that were slightly, but significantly, lower than wild-type controls (1.5-2.0 degrees C and 2.0-4.0 degrees C, respectively). The results indicate functionality of DAFP-1 in Drosophila melanogaster (the ability of DAFP-1 to inhibit both inoculative freezing across the cuticle and freezing initiated by endogenous ice nucleators). The much larger effects of DAFPs in inhibiting inoculative freezing and ice nucleation in Dendroides canadensis relative to the transgenic Drosophila may partially result from the lower DAFP concentrations and activities in Drosophila, however the absence of multiple types of DAFPs and absence of tissue specific expression may also contribute. Transgenic Drosophila were also able to live significantly longer than controls at 0 degrees C and 4 degrees C, indicating that DAFP-1 is able to increase cold tolerance at above freezing temperatures.


Subject(s)
Antifreeze Proteins/metabolism , Coleoptera/genetics , Drosophila melanogaster/metabolism , Acclimatization/physiology , Animals , Animals, Genetically Modified/metabolism , Antifreeze Proteins/genetics , Antifreeze Proteins/physiology , Blotting, Northern , Blotting, Western , Chromosome Mapping , Drosophila melanogaster/genetics , Drosophila melanogaster/physiology , Female , Freezing , Hemolymph/metabolism , Transformation, Genetic
19.
Comp Biochem Physiol B Biochem Mol Biol ; 144(3): 290-300, 2006 Jul.
Article in English | MEDLINE | ID: mdl-16725360

ABSTRACT

A quantification method was developed to determine the concentrations of the major antifreeze glycoprotein (AFGP) isoforms in the blood of Antarctic notothenioid fishes. Serum samples were precipitated with 2.5% TCA and the supernatant containing AFGPs were chromatographed on an HPLC size exclusion column and the concentrations of the major AFGP size classes were determined from the areas of the corresponding peaks in the elution profile. Eight species of Antarctic notothenioid fishes were examined and their blood AFGP concentrations varied from 5 to 35 mg/mL. All of these fishes synthesized both the large and small AFGPs, but maintained higher levels of small AFGPs than the large ones in their blood. The species inhabiting more severe water environments (lower temperature and presence of ice) had higher serum AFGP levels than those in milder environments. The cryopelagic Pagothenia borchgrevinki decreased their blood AFGP concentrations in response to warm acclimation, but to a much lower extent in comparison to the antifreeze-bearing fishes in the Northern Hemisphere. After being warm acclimated at +4 degrees C for 16 weeks, the serum concentrations of the small and large AFGPs were decreased by about 60% and 20%, respectively.


Subject(s)
Acclimatization , Antifreeze Proteins/metabolism , Antifreeze Proteins/physiology , Perciformes/physiology , Temperature , Animals , Antarctic Regions , Chromatography, Gel , Chromatography, High Pressure Liquid/methods , Environment , Fishes/physiology , Ions/blood , Osmolar Concentration , Perciformes/blood , Reproducibility of Results
20.
Nat Commun ; 7: 12987, 2016 10 04.
Article in English | MEDLINE | ID: mdl-27698404

ABSTRACT

The mechanisms by which the eggs of the Antarctic notothenioid fishes avoid freezing are not fully understood. Zona pellucida proteins (ZPs) are constituents of the chorion which forms a protective matrix surrounding the egg. Here we report occurrence of freezing temperature-related gene expansion and acquisition of unusual ice melting-promoting (IMP) activity in a family of Antarctic notothenioid ZPs (AnnotoZPs). Members of AnnotoZPs are shown to bind with ice and non-colligatively depress the melting point of a solution in a range of 0.26 to 0.65 °C at a moderate concentration. Eggs of zebrafishes expressing an AnnotoZP transgene show improved melting point depression and enhanced survival in freezing conditions. Mutational analyses in a representative AnnotoZP indicate the ZP domain and patches of acidic residues are essential structures for the IMP activity. AnnotoZPs, therefore, represent a group of macromolecules that prevent freezing by a unique ZP-ice interaction mechanism distinct from the known antifreeze proteins.


Subject(s)
Adaptation, Physiological , Antifreeze Proteins/physiology , Freezing , Oocytes/physiology , Zebrafish/physiology , Zona Pellucida/physiology , Animals , Antarctic Regions , Cold Temperature , DNA Mutational Analysis , Expressed Sequence Tags , Genome , Models, Molecular , Phylogeny , Protein Conformation , Recombinant Proteins/metabolism , Temperature , Transgenes , Zebrafish/genetics
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