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1.
Euro Surveill ; 29(38)2024 Sep.
Article in English | MEDLINE | ID: mdl-39301739

ABSTRACT

BackgroundBrucellosis is a bacterial zoonosis causing severe illness in humans and animals and leading to economic losses in the livestock production in Türkiye and other endemic countries.AimWe aimed at investigating genomic differences of Brucella isolates from animals and humans in Türkiye.MethodsWe used whole genome sequencing (WGS) to assess the genetic diversity of Brucella isolates from 41 provinces in Türkiye and compared with isolates from other countries. We applied allele-based typing and core genome single nucleotide polymorphism (cgSNP) determination.ResultsOf the 106 Turkish Brucella isolates included, 57 were B. abortus and 49 were B. melitensis. One B. melitensis and two B. abortus isolates were identified as vaccine strains. Most (n = 55) B. abortus isolates clustered in three major branches, with no spatial discernible pattern. Of the B. melitensis isolates, 48 were assigned to the Eastern Mediterranean lineage with no discernible patterns between host species, location and sampling date. The Turkish isolates clustered with isolates from neighbouring countries such as Greece and Syria, but some also with isolates from human patients in European countries, like Germany, Norway and Sweden, suggesting that the source may be travel-related.ConclusionSeveral B. melitensis and B. abortus lineages are circulating in Türkiye. To decrease the prevalence and prevent brucellosis in animals and humans, stricter control measures are needed, particularly in areas where humans and animals have close contact. Furthermore, illegal transportation of animals across borders should be more closely controlled and regulated.


Subject(s)
Brucellosis , Whole Genome Sequencing , Animals , Humans , Brucellosis/microbiology , Brucellosis/epidemiology , Brucellosis/veterinary , Turkey/epidemiology , Brucella melitensis/genetics , Brucella melitensis/isolation & purification , Polymorphism, Single Nucleotide , Phylogeny , Brucella/genetics , Brucella/isolation & purification , Brucella/classification , Livestock/microbiology , Cattle , Genomics , Brucella abortus/genetics , Brucella abortus/isolation & purification , Brucella abortus/classification , Zoonoses/microbiology , Genetic Variation , Bacterial Zoonoses/microbiology , Genome, Bacterial
2.
J Clin Microbiol ; 61(8): e0043823, 2023 08 23.
Article in English | MEDLINE | ID: mdl-37395662

ABSTRACT

Bacteria of the genus Brucella are facultative intracellular parasites that cause brucellosis, a severe animal and human disease. Recently, a group of taxonomists merged the brucellae with the primarily free-living, phylogenetically related Ochrobactrum spp. in the genus Brucella. This change, founded only on global genomic analysis and the fortuitous isolation of some opportunistic Ochrobactrum spp. from medically compromised patients, has been automatically included in culture collections and databases. We argue that clinical and environmental microbiologists should not accept this nomenclature, and we advise against its use because (i) it was presented without in-depth phylogenetic analyses and did not consider alternative taxonomic solutions; (ii) it was launched without the input of experts in brucellosis or Ochrobactrum; (iii) it applies a non-consensus genus concept that disregards taxonomically relevant differences in structure, physiology, population structure, core-pangenome assemblies, genome structure, genomic traits, clinical features, treatment, prevention, diagnosis, genus description rules, and, above all, pathogenicity; and (iv) placing these two bacterial groups in the same genus creates risks for veterinarians, medical doctors, clinical laboratories, health authorities, and legislators who deal with brucellosis, a disease that is particularly relevant in low- and middle-income countries. Based on all this information, we urge microbiologists, bacterial collections, genomic databases, journals, and public health boards to keep the Brucella and Ochrobactrum genera separate to avoid further bewilderment and harm.


Subject(s)
Brucella , Ochrobactrum , Ochrobactrum/classification , Ochrobactrum/genetics , Ochrobactrum/pathogenicity , Ochrobactrum/physiology , Brucella/classification , Brucella/genetics , Brucella/pathogenicity , Brucella/physiology , Terminology as Topic , Phylogeny , Brucellosis/drug therapy , Brucellosis/microbiology , Humans , Opportunistic Infections/microbiology
3.
Eur J Clin Microbiol Infect Dis ; 40(9): 1909-1917, 2021 Sep.
Article in English | MEDLINE | ID: mdl-33837878

ABSTRACT

The use of matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry has proven to be rapid and accurate for the majority of clinical isolates. Some gaps remain concerning rare, emerging, or highly pathogenic species, showing the need to continuously expand the databases. In this multicenter study, we evaluated the accuracy of the VITEK MS v3.2 database in identifying 1172 unique isolates compared to identification by DNA sequence analysis. A total of 93.6% of the isolates were identified to species or group/complex level. A remaining 5.2% of the isolates were identified to the genus level. Forty tests gave a result of no identification (0.9%) and 12 tests (0.3%) gave a discordant identification compared to the reference identification. VITEK MS is also the first MALDI-TOF MS system that is able to delineate the four members of the Acinetobacter baumannii complex at species level without any specific protocol or special analysis method. These findings demonstrate that the VITEK MS v3.2 database is highly accurate for the identification of bacteria and fungi encountered in the clinical laboratory as well as emerging species like Candida auris and the highly pathogenic Brucella species.


Subject(s)
Bacteria/isolation & purification , Brucella/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/instrumentation , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/standards , Yeasts/isolation & purification , Bacteria/chemistry , Bacteria/classification , Brucella/chemistry , Brucella/classification , Brucella/pathogenicity , Databases, Factual/statistics & numerical data , Humans , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Yeasts/chemistry , Yeasts/classification
4.
BMC Vet Res ; 17(1): 126, 2021 Mar 20.
Article in English | MEDLINE | ID: mdl-33743687

ABSTRACT

BACKGROUND: A novel Brucella strain closely related to Brucella (B.) melitensis biovar (bv) 3 was found in Croatian cattle during testing within a brucellosis eradication programme. CASE PRESENTATION: Standardised serological, brucellin skin test, bacteriological and molecular diagnostic screening for Brucella infection led to positive detection in one dairy cattle herd. Three isolates from that herd were identified to species level using the Bruce ladder method. Initially, two strains were typed as B. melitensis and one as B. abortus, but multiplex PCR based on IS711 and the Suis ladder showed that all of them to belong to B. melitensis, and the combination of whole-genome and multi-locus sequencing as well as Multi-Locus Variable numbers of tandem repeats Analysis (MLVA) highlighted a strong proximity within the phylogenetic branch of B. melitensis strains previously isolated from Croatia, Albania, Kosovo and Bosnia and Herzegovina. Two isolates were determined to be B. melitensis bv. 3, while the third showed a unique phylogenetic profile, growth profile on dyes and bacteriophage typing results. This isolate contained the 609-bp omp31 sequence, but not the 723-bp omp31 sequence present in the two isolates of B. melitensis bv. 3. CONCLUSIONS: Identification of a novel Brucella variant in this geographic region is predictable given the historic endemicity of brucellosis. The emergence of a new variant may reflect a combination of high prevalence among domestic ruminants and humans as well as weak eradication strategies. The zoonotic potential, reservoirs and transmission pathways of this and other Brucella variants should be explored.


Subject(s)
Brucella/isolation & purification , Brucellosis/veterinary , Cattle Diseases/microbiology , Animals , Brucella/classification , Brucellosis/microbiology , Cattle , Croatia , Female , Genetic Variation , Genome, Bacterial , Multilocus Sequence Typing/veterinary , Multiplex Polymerase Chain Reaction/veterinary , Phylogeny
5.
Food Microbiol ; 100: 103873, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34416970

ABSTRACT

The bulk milk examination is a reliable screening tool for monitoring the quality of milk in the farms. The infection to Neospora caninum, Toxoplasma gondii and Brucella sp. Was evaluated in bulk milk samples of dairy farms in Hamedan province, West part of Iran. All the dairy farms (n = 149) were examined for N. caninum, T. gondii and Brucella infections using milk ring test (MRT), microbiology, serology (Enzyme-linked Immunosorbent Assay), and molecular techniques. Based on molecular methods, Brucella-infection was negative in all farms; while, 55 %, 5.4 % and 2.7 % of samples were positive for N. caninum, T. gondii and mix infection, respectively. The highest Neospora-infection was detected in the farms with history of abortion in fall and winter. There was significant association between Neospora-infection and the presence of dogs and rodents in the farms, herd size, and age of the animals. Also, a significant association was seen between Toxoplasma-infection and the presence of cats and rodents in the farms, as well as age of the animals. Average total bacterial count (TBC) was calculated 1.14 × 106±1.1 × 106. The highest TBC was in the farms from Central locations of studied area (5.7 × 106±2.24 × 106), farms with more than 120 animals (7.9 × 106±2.8 × 106), and farms with ≥50-months age (1.74 × 106±6.3 × 105) in spring and summer (6.9 × 106±3.7 × 106). The number of somatic cells was estimated between 1 × 104 and 2 × 106 (Average = 4.2 × 105±3.39 × 105). The current study was a comprehensive evaluation of Neospora, Toxoplasma and Brucella infections in milk samples of Iranian dairy farms for the first time. Neospora-infection is responsible for economic losses in the region. Health education and milk pasteurization are so helpful for inhibiting the milk borne diseases. To reduce the risk factors, predict and design the appropriate schemes like redundant of heterogeneous animals are recommended.


Subject(s)
Brucella/isolation & purification , Coccidiosis/veterinary , Food Contamination/analysis , Milk/microbiology , Milk/parasitology , Neospora/isolation & purification , Toxoplasma/isolation & purification , Animals , Animals, Domestic/microbiology , Animals, Domestic/parasitology , Brucella/classification , Brucella/genetics , Brucellosis/microbiology , Brucellosis/veterinary , Cat Diseases/microbiology , Cat Diseases/parasitology , Cats , Cattle , Cattle Diseases/microbiology , Cattle Diseases/parasitology , Coccidiosis/parasitology , Dog Diseases/microbiology , Dog Diseases/parasitology , Dogs , Farms , Female , Male , Milk/chemistry , Neospora/classification , Neospora/genetics , Toxoplasma/classification , Toxoplasma/genetics , Toxoplasmosis, Animal/parasitology
6.
Clin Microbiol Rev ; 33(1)2019 12 18.
Article in English | MEDLINE | ID: mdl-31722888

ABSTRACT

The clinical presentation of brucellosis in humans is variable and unspecific, and thus, laboratory corroboration of the diagnosis is essential for the patient's proper treatment. The diagnosis of brucellar infections can be made by culture, serological tests, and nucleic acid amplification assays. Modern automated blood culture systems enable detection of acute cases of brucellosis within the routine 5- to 7-day incubation protocol employed in clinical microbiology laboratories, although a longer incubation and performance of blind subcultures may be needed for protracted cases. Serological tests, though they lack specificity and provide results that may be difficult to interpret in individuals repeatedly exposed to Brucella organisms, nevertheless remain a diagnostic cornerstone in resource-poor countries. Nucleic acid amplification assays combine exquisite sensitivity, specificity, and safety and enable rapid diagnosis of the disease. However, long-term persistence of positive molecular test results in patients that have apparently fully recovered is common and has unclear clinical significance and therapeutic implications. Therefore, as long as there are no sufficiently validated commercial tests or studies that demonstrate an adequate interlaboratory reproducibility of the different homemade PCR assays, cultures and serological methods will remain the primary tools for the diagnosis and posttherapeutic follow-up of human brucellosis.


Subject(s)
Brucella , Brucellosis/diagnosis , Brucellosis/microbiology , Brucella/classification , Brucella/genetics , Clinical Laboratory Techniques , Humans , Molecular Diagnostic Techniques , Nucleic Acid Amplification Techniques , Serologic Tests
7.
Eur J Clin Microbiol Infect Dis ; 39(3): 575-581, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31960174

ABSTRACT

Brucellosis is a zoonosis mainly present in developing countries. The WHO reports 500,000 new cases every year. From 2012 to 2016, 13,677 cases were reported in Mexico, with 2.00 to 2.64 rate per 100,000 inhabitants. To analyze the diagnostic algorithm of brucellosis in Mexico, we compared the commercial laboratory tests ELISA, Brucellacapt®, and lateral flow test (LFT) in a study of 473 individuals from two endemic Mexican populations. All patients were treated in first-level medical units for presenting brucellosis compatible symptoms and without a history of the disease. Clinical-epidemiological information was gathered and initial serum samples were obtained to react with anti-Brucella antibodies; subsequent samples were collected at follow-up treatment visits. Using the Rose Bengal screening, we found 165 negative samples and 308 positive reactive samples, of which 222 cases were confirmed and 234 were positive on at least one marker (IgG or IgM) or LFT. When Brucellacapt® was used, similar results to those observed with the conventional algorithm were found as judged by the Cohen's kappa coefficient (κ) (0.813, 95% CI 0.7788-0.8472). Similar κ indices between conventional algorithm and ELISA pair were found, 0.7038 (95% CI 0.6555-0.7521), representing high similarity between both groups of diagnosis. We conclude that conventional serodiagnoses, Brucellacapt® and LFT, presented inconclusive results and poor correlation between them. By contrast, ELISA test pair (IgG + IgM) presented high correlation with the conventional algorithm and greater capacity for correct positive and negative classification.


Subject(s)
Brucella/classification , Brucellosis/diagnosis , Brucellosis/prevention & control , Serologic Tests , Adult , Algorithms , Brucellosis/epidemiology , Brucellosis/microbiology , Disease Management , Female , Follow-Up Studies , Humans , Male , Mexico/epidemiology , Middle Aged , Public Health Surveillance , Reproducibility of Results , Risk Factors , Sensitivity and Specificity , Serologic Tests/methods , Serologic Tests/standards , Young Adult
8.
Antonie Van Leeuwenhoek ; 113(10): 1531-1537, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32699967

ABSTRACT

Atypical brucellae show deviant phenotypes and/or genotypes. Besides Brucella inopinata, B. microti and B. vulpis, atypical strains have been described infecting humans, rodents, amphibians and fish. They represent potential zoonotic agents. Here, we provide evidence that reptiles as the remaining poikilothermic vertebrate class also represent susceptible hosts for atypical Brucella.


Subject(s)
Brucella/classification , Brucella/physiology , Host Specificity , Lizards/microbiology , Animals , Female , Genome, Bacterial , Genomics/methods , Molecular Typing , Phylogeny
9.
Int J Mol Sci ; 21(20)2020 Oct 20.
Article in English | MEDLINE | ID: mdl-33092044

ABSTRACT

Brucella organisms are responsible for one of the most widespread bacterial zoonoses, named brucellosis. The disease affects several species of animals, including humans. One of the most intriguing aspects of the brucellae is that the various species show a ~97% similarity at the genome level. Still, the distinct Brucella species display different host preferences, zoonotic risk, and virulence. After 133 years of research, there are many aspects of the Brucella biology that remain poorly understood, such as host adaptation and virulence mechanisms. A strategy to understand these characteristics focuses on the relationship between the genomic diversity and host preference of the various Brucella species. Pseudogenization, genome reduction, single nucleotide polymorphism variation, number of tandem repeats, and mobile genetic elements are unveiled markers for host adaptation and virulence. Understanding the mechanisms of genome variability in the Brucella genus is relevant to comprehend the emergence of pathogens.


Subject(s)
Brucella/genetics , Brucellosis/diagnosis , Genome, Bacterial/genetics , Genomics/methods , Animals , Brucella/classification , Brucella/pathogenicity , Brucellosis/microbiology , Evolution, Molecular , Humans , Phylogeny , Polymorphism, Single Nucleotide , Virulence/genetics
10.
Trop Anim Health Prod ; 52(6): 3537-3544, 2020 Nov.
Article in English | MEDLINE | ID: mdl-32948966

ABSTRACT

INTRODUCTION: Brucellosis is an important zoonotic disease in Kenya, and identifying the bacteria in milk is important in assessing the risk of exposure in people. METHODS: A cross-sectional study that involved 175 households was implemented in the pastoral counties of Marsabit and Isiolo in Kenya. Pooled milk samples (n = 164) were collected at the household level, and another 372 were collected from domesticated lactating animals (312 goats, 7 sheep, 50 cattle and 3 camels). Real-time polymerase chain reaction (qPCR) testing of the milk samples was performed to identify Brucella species. Brucella anti-LPS IgG antibodies were also detected in bovine milk samples using an indirect enzyme-linked immunosorbent assay (ELISA). RESULTS: Based on the qPCR, the prevalence of the pathogen at the animal level (considering samples from individual animals) was 2.4% (95% confidence interval (CI) 1.1-4.5) and 3.0% (CI: 1.0-7.0) in pooled samples. All 14 samples found positive by qPCR were from goats, with 10 contaminated with B. abortus and 4 with B. melitensis. The Brucella spp. antibody prevalence in bovine milk using the milk ELISA was 26.0% (95% CI: 14.6-40.3) in individual animal samples and 46.3% (95% CI: 30.7-62.6) in pooled samples. CONCLUSION: The study is the first in Kenya to test for Brucella spp. directly from milk using qPCR without culturing for the bacteria. It also detected B. abortus in goats, suggesting transmission of brucellosis between cattle and goats. The high prevalence of Brucella spp. is a significant public health risk, and there is a need for intervention strategies necessary in the study area.


Subject(s)
Brucella/isolation & purification , Brucellosis/veterinary , Camelus , Cattle Diseases/epidemiology , Goat Diseases/epidemiology , Milk/microbiology , Sheep Diseases/epidemiology , Animals , Brucella/classification , Brucellosis/epidemiology , Brucellosis/microbiology , Cattle , Cattle Diseases/microbiology , Cross-Sectional Studies , Enzyme-Linked Immunosorbent Assay/veterinary , Female , Goat Diseases/microbiology , Goats , Kenya/epidemiology , Lactation , Prevalence , Real-Time Polymerase Chain Reaction/veterinary , Sheep , Sheep Diseases/microbiology , Sheep, Domestic , Zoonoses/epidemiology , Zoonoses/microbiology
11.
BMC Microbiol ; 19(1): 292, 2019 12 16.
Article in English | MEDLINE | ID: mdl-31842756

ABSTRACT

BACKGROUND: Human brucellosis has become a severe public health problem in China's Guangxi Province, and there has been higher prevalence of brucellosis in this region after 2010. Both multiple locus variable-number tandem repeat analysis (MLVA) and multilocus sequence typing (MLST) assay schedules were used to genotype isolates and determine relationships among isolates. RESULTS: A total of 40 isolates of Brucella were obtained from humans, pigs, and dogs from 1961 to 2016. There were at least three species of Brucella detected in Guangxi Province, Brucella melitensis, Brucella suis, and Brucella canis, with 16, 17, and 7 isolates, respectively. Of which B. suis biovar 3 was the predominant species resulting in pig brucellosis in the area examined before 2000s. Moreover, B. melitensis biovar 3 was found to be mainly responsible for human brucellosis during 2012-2016. All B. melitensis isolates in this study belonged to East Mediterranean lineage. MLVA-11 genotype 116 was the dominant genotype and represented 81.2% of the isolates. MLVA cluster analysis showed there to be 44% (7/16) brucellosis cases caused by B. melitensis with a profile of outbreak epidemic from 2012 to 2016. However, nearly 83.3% (20/24) of brucellosis cases resulting from both B. suis and B. canis showed no epidemiological links or sporadic characteristics. MLVA-16 analysis confirmed extensive genotype-sharing events between B. melitensis isolates from Guangxi and other northern provinces within China. These data revealed that there are potential epidemiology links among these strains. B. suis strains of this study showed a unique genetic lineage at the global level and may have existed historically in this area. However, present B. canis isolates were closely related to previously reported isolates in Korea, where they may have originated. MLST typing showed that the population structure of Brucella strains had changed considerably in this province; ST17 and ST21, two previously predominant populations appeared to have been replaced by recently emerging ST8 group. CONCLUSIONS: Our investigation data have inspired the hypothesis that Guangxi Province had been subject to an imported human brucellosis epidemic. Our data suggest that strains found in Northern regions of China are the principal source of infections in recent cases of human brucellosis in Guangxi Province. Comparative genomic analysis from more strains is necessary to confirm this hypothesis. This work will facilitate better understanding of the epidemiology and improve the effectiveness of control and prevention of brucellosis in this region.


Subject(s)
Brucella/classification , Brucellosis/microbiology , Genetic Variation , Animals , Bacterial Typing Techniques , Brucella/isolation & purification , Brucellosis/epidemiology , China/epidemiology , DNA, Bacterial/genetics , Dogs , Genomics , Genotype , Humans , Multilocus Sequence Typing , Swine
12.
Arch Microbiol ; 201(8): 1025-1028, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31101955

ABSTRACT

Brucellosis is an infectious disease caused by bacteria of the genus Brucella, which affects domestic animals and is transmissible to humans. The objective of this study was to evaluate six methods of DNA extraction directly from bovine tissue to detect Brucella spp. The Cq values for all samples were above 30 and varied according to the extraction kit used, but four kits showed no statistical difference in sensitivity. This work demonstrates the importance of choosing the best extraction kit before validation of a molecular diagnostic technique.


Subject(s)
Brucella/genetics , Brucellosis/diagnosis , Brucellosis/veterinary , Cattle Diseases/diagnosis , DNA, Bacterial/genetics , Real-Time Polymerase Chain Reaction/methods , Animals , Animals, Domestic/microbiology , Brucella/classification , Brucella/isolation & purification , Brucellosis/microbiology , Cattle , Cattle Diseases/microbiology , Humans , Molecular Diagnostic Techniques/veterinary , Sensitivity and Specificity
13.
BMC Microbiol ; 18(1): 7, 2018 01 10.
Article in English | MEDLINE | ID: mdl-29361930

ABSTRACT

BACKGROUND: Brucellosis incidence in China is divided into three stages: high incidence (1950s-1960s), decline (1970s-1980s), and re-emergence (1990s-2010s). At the re-emergence stage, Brucellosis incidence grew exponentially and spread to all 32 provinces. We describe the magnitude and the etiological distribution changes in mainland China by genotyping data and emphasize its recent reemergence. We also provide the genetic diversity and molecular epidemiological characteristics of Brucella. RESULTS: From a total of 206 Brucella isolates, 19 MLST genotypes (STs) were identified and 13 new STs(ST71-83)were found. MLST grouped the population into three clusters. B. melitensis, B. abortus and B. suis were grouped into cluster 1, 2 and 3 respectively. The predominant genotype in the first cluster by MLST, remained unchanged during the three stages. However, the proportion of genotypes in the three stages had changed. More isolates were clustered in ST8 at the re-emergence stage. STs71-74, which were not found in the two former stages, appeared at the re-emergence stage. CONCLUSIONS: The changing molecular epidemiology of brucellosis improve our understanding of apparent geographic expansion from the historically affected north of China to southern provinces in recent reemergence.


Subject(s)
Brucella/classification , Brucella/genetics , Brucella/isolation & purification , Brucellosis/epidemiology , Brucellosis/microbiology , Genes, Bacterial/genetics , Multilocus Sequence Typing/methods , Polymorphism, Genetic , Animals , Brucella/pathogenicity , Brucellosis/diagnosis , Brucellosis/veterinary , China/epidemiology , Cluster Analysis , DNA, Bacterial/genetics , Endemic Diseases , Genetic Variation , Genotype , Humans , Molecular Epidemiology , Phylogeny
14.
J Appl Microbiol ; 125(3): 646-654, 2018 Sep.
Article in English | MEDLINE | ID: mdl-30152897

ABSTRACT

AIM: The aim of this study was to develop polymerase spiral reaction (PSR) for rapid, sensitive and specific detection of Brucella sp. METHODS AND RESULTS: Polymerase spiral reaction assay was developed using specifically designed primers targeting the conserved multicopy IS711 gene of Brucella sp. The assay could be performed within 60 min at an isothermal temperature of 64°C. The lower limit of detection of PSR was 11·8 fg and conventional PCR was 1·18 pg of Brucella abortus genomic DNA. Thus, PSR was found to be 100-fold more sensitive than conventional PCR and was comparable to real-time PCR. The specificity of PSR was tested with other non-Brucella bacteria and also with some bacterial and viral pathogens causing abortions. The assay was found to be specific as it did not detect any putative pathogens other than Brucella sp. Fifty-six clinical samples suspected for brucellosis (aborted fetal stomach content) were screened with PSR to validate the applicability of the test to detect Brucella DNA. The same samples were also screened with conventional PCR and real-time PCR. Of 56 samples, 25 samples were found to be positive with both PSR as well as real-time PCR, whereas only 20 samples were found positive with conventional PCR. CONCLUSIONS: The results of this study indicated that the PSR assay is a simple, rapid, sensitive and specific method for the detection of Brucella sp. that may improve diagnostic potential in clinical laboratories or can be used at diagnostic laboratories with minimal infrastructure. SIGNIFICANCE AND IMPACT OF THE STUDY: The PSR assay, because of its simplicity and low cost, can be preferred to other molecular methods in the diagnosis of infectious diseases.


Subject(s)
Biological Assay/methods , Brucella/classification , Brucella/genetics , DNA/analysis , Gastrointestinal Contents/chemistry , Brucellosis/diagnosis , DNA Primers/genetics , Humans , Limit of Detection , Real-Time Polymerase Chain Reaction/methods , Sensitivity and Specificity , Temperature
15.
Dis Aquat Organ ; 131(2): 87-94, 2018 Nov 06.
Article in English | MEDLINE | ID: mdl-30460915

ABSTRACT

Brucella spp. were first isolated from marine mammals in 1994 and since have been described in numerous pinniped and cetacean species with nearly global distribution. Microscopic, electron microscopic, or culture results have shown lungworms in harbor seals to be infected with brucellae, suggesting that the lungworms may serve a role in this infection. In this study, we reviewed archived and more recent case material from 5 Pacific harbor seals from Washington State (USA) with evidence of B. pinnipedialis infection in the lungworm Parafilaroides sp. Twenty-two sections of lung containing approximately 220 Parafilaroides sp., stained with an immunohistochemical technique using antibody to B. abortus, showed approximately 80 (36%) infected nematodes. A few brucellae were also present in lung parenchyma in proximity to nematodes. Infection was present in the first- and fourth-stage larvae in the seal lung and intestines, as well as in the male and female reproductive organs of adult nematodes. Infected sperm deposits in the nematode uterus were suggestive of venereal transmission between lungworms. Massive infection of some degenerate adult lungworms and evidence of degeneration of some developing larvae in utero were observed. Based on these observations, we suggest that Parafilaroides sp., rather than the Pacific harbor seal Phoca vitulina richardsi, is the preferred host of B. pinnipedialis infection.


Subject(s)
Brucella/isolation & purification , Brucellosis/veterinary , Nematoda/microbiology , Nematode Infections/veterinary , Phoca/parasitology , Animals , Brucella/classification , Brucellosis/microbiology , Nematode Infections/parasitology
16.
Food Microbiol ; 70: 113-119, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29173617

ABSTRACT

Globally, unpasteurized milk products are vehicles for the transmission of brucellosis, a zoonosis responsible for cases of foodborne illness in the United States and elsewhere. Existing PCR assays to detect Brucella species are restricted by the resolution of band sizes on a gel or the number of fluorescent channels in a single real-time system. The Luminex bead-based suspension array is performed in a 96-well plate allowing for high throughput screening of up to 100 targets in one sample with easily discernible results. We have developed an array using the Bio-Plex 200 to differentiate the most common Brucella species: B. abortus, B. melitensis, B. suis, B. suis bv5, B. canis, B. ovis, B. pinnipedia, and B. neotomae, as well as Brucella genus. All probes showed high specificity, with no cross-reaction with non-Brucella strains. We could detect pure DNA from B. abortus, B. melitensis, and genus-level Brucella at concentrations of ≤5 fg/µL. Pure DNA from all other species tested positive at concentrations well below 500 fg/µL and we positively identified B. neotomae in six artificially contaminated cheese and milk products. An intra-laboratory verification further demonstrated the assay's accuracy and robustness in the rapid screening (3-4 h including PCR) of DNA.


Subject(s)
Bacterial Typing Techniques/methods , Brucella/isolation & purification , Brucellosis/microbiology , Oligonucleotide Array Sequence Analysis/methods , Animals , Bacterial Typing Techniques/instrumentation , Brucella/classification , Brucella/genetics , Brucellosis/transmission , DNA, Bacterial/genetics , Humans , Milk/microbiology , Oligonucleotide Array Sequence Analysis/instrumentation , Sensitivity and Specificity , Sheep
17.
Emerg Infect Dis ; 23(6): 997-1000, 2017 06.
Article in English | MEDLINE | ID: mdl-28518028

ABSTRACT

Several species of Brucella are known to be zoonotic, but B. neotomae infection has been thought to be limited to wood rats. In 2008 and 2011, however, B. neotomae was isolated from cerebrospinal fluid of 2 men with neurobrucellosis. The nonzoonotic status of B. neotomae should be reassessed.


Subject(s)
Brucella/genetics , Brucellosis/epidemiology , DNA, Bacterial/genetics , Genome, Bacterial , Zoonoses/epidemiology , Animals , Arvicolinae/microbiology , Brucella/classification , Brucella/isolation & purification , Brucellosis/diagnosis , Brucellosis/microbiology , Costa Rica/epidemiology , Humans , Male , Middle Aged , Phylogeny , Zoonoses/microbiology
18.
J Appl Microbiol ; 122(1): 40-53, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27740712

ABSTRACT

AIMS: To discuss together the novel cases of Brucella infections in frogs with the results of published reports to extend our current knowledge on 'atypical' brucellae isolated from amphibians and to discuss the challenges we face on this extraordinary emerging group of pathogens. METHODS AND RESULTS: Since our first description, an additional 14 isolates from four different frog species were collected. Novel isolates and a subset of Brucella isolates previously cultured from African bullfrogs were characterized by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS), Fourier transform-infrared (FT-IR) spectroscopy and broth microdilution susceptibility testing. MALDI-TOF MS worked very efficiently for an accurate bacterial identification to the genus level. Within the cluster analysis, 'atypical' brucellae grouped distant from Brucella melitensis and were even more separated by FT-IR spectroscopy with respect to their geographical origin. Minimum inhibitory concentrations of 14 antimicrobial substances are provided as baseline data on antimicrobial susceptibility. CONCLUSIONS: The case history of Brucella infections in amphibians reveals a variety of pathologies ranging from localized manifestations to systemic infections. Some isolates seem to be capable of causing high mortality in zoological exhibitions putting higher demands on the management of endangered frog species. There is considerable risk in overlooking and misidentifying 'atypical' Brucella in routine diagnostics. SIGNIFICANCE AND IMPACT OF THE STUDY: Brucella have only recently been described in cold-blooded vertebrates. Their presence in frog species native to Africa, America and Australia indicates a more common occurrence in amphibians than previously thought. This study provides an extensive overview of amphibian brucellae by highlighting the main features of their clinical significance, diagnosis and zoonotic potential.


Subject(s)
Brucella/classification , Brucella/isolation & purification , Brucellosis/veterinary , Amphibians , Animals , Australia , Brucella/drug effects , Brucella/physiology , Brucellosis/epidemiology , Brucellosis/microbiology , Brucellosis/pathology , Cluster Analysis , Humans , Microbial Sensitivity Tests , Phylogeny , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Spectroscopy, Fourier Transform Infrared , Zoonoses
19.
Antonie Van Leeuwenhoek ; 110(2): 221-234, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27785661

ABSTRACT

A pleomorphic Gram-negative, motile coccobacillus was isolated from the gills of a wild-caught bluespotted ribbontail ray after its sudden death during quarantine. Strain 141012304 was observed to grow aerobically, to be clearly positive for cytochrome oxidase, catalase, urease and was initially identified as "Brucella melitensis" or "Ochrobactrum anthropi" by Matrix-assisted laser desorption/ionization-time of flight mass spectrometry and VITEK2-compact®, respectively. Affiliation to the genus Brucella was confirmed by bcsp31 and IS711 PCR as well as by Brucella species-specific multiplex PCR, therein displaying a characteristic banding pattern recently described for Brucella strains obtained from amphibian hosts. Likewise, based on recA sequencing, strain 141012304 was found to form a separate lineage, within the so called 'atypical' Brucella, consisting of genetically more distantly related strains. The closest similarity was detected to brucellae, which have recently been isolated from edible bull frogs. Subsequent next generation genome sequencing and phylogenetic analysis confirmed that the ray strain represents a novel Brucella lineage within the atypical group of Brucella and in vicinity to Brucella inopinata and Brucella strain BO2, both isolated from human patients. This is the first report of a natural Brucella infection in a saltwater fish extending the host range of this medically important genus.


Subject(s)
Brucella/classification , Brucella/genetics , Skates, Fish/microbiology , Animals , Aquatic Organisms/microbiology , Brucella/isolation & purification , DNA, Bacterial/genetics , Phylogeny , Species Specificity
20.
Anal Biochem ; 510: 11-17, 2016 10 01.
Article in English | MEDLINE | ID: mdl-27423961

ABSTRACT

Palladium nanoparticles were potentiostatically electrodeposited on a gold surface at a highly negative potential. The nanostructure, as a transducer, was utilized to immobilize a Brucella-specific probe and the process of immobilization and hybridization was detected by electrochemical methods. The proposed method for detection of the complementary sequence and a non-complementary sequence was applied. The fabricated genosensor was evaluated for the assay of the bacteria in the cultured and human samples with and without PCR. The genosensor could detect the complementary sequence with a sensitivity of 0.02 µA dm(3) mol(-1), a linear concentration range of 1.0 × 10(-12) to 1.0 × 10(-19) mol dm(-3), and a detection limit of 2.7 × 10(-20) mol dm(-3).


Subject(s)
Bacterial Typing Techniques/methods , Brucella , DNA Probes/chemistry , Electrochemical Techniques/methods , Metal Nanoparticles/chemistry , Palladium/chemistry , Brucella/classification , Brucella/genetics , DNA Probes/genetics , Humans
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