Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 18 de 18
Filter
1.
Immunity ; 42(4): 613-26, 2015 Apr 21.
Article in English | MEDLINE | ID: mdl-25862091

ABSTRACT

Epigenetic regulation of lineage-specific genes is important for the differentiation and function of T cells. Ten-eleven translocation (Tet) proteins catalyze 5-methylcytosine (5 mC) conversion to 5-hydroxymethylcytosine (5 hmC) to mediate DNA demethylation. However, the roles of Tet proteins in the immune response are unknown. Here, we characterized the genome-wide distribution of 5 hmC in CD4(+) T cells and found that 5 hmC marks putative regulatory elements in signature genes associated with effector cell differentiation. Moreover, Tet2 protein was recruited to 5 hmC-containing regions, dependent on lineage-specific transcription factors. Deletion of Tet2 in T cells decreased their cytokine expression, associated with reduced p300 recruitment. In vivo, Tet2 plays a critical role in the control of cytokine gene expression in autoimmune disease. Collectively, our findings suggest that Tet2 promotes DNA demethylation and activation of cytokine gene expression in T cells.


Subject(s)
Cytokines/biosynthesis , DNA-Binding Proteins/immunology , Epigenesis, Genetic/immunology , Proto-Oncogene Proteins/immunology , Th1 Cells/immunology , Th17 Cells/immunology , 5-Methylcytosine/analogs & derivatives , Animals , Cell Differentiation , Cytokines/immunology , Cytosine/analogs & derivatives , Cytosine/immunology , Cytosine/metabolism , DNA/immunology , DNA/metabolism , DNA Methylation , DNA-Binding Proteins/genetics , Dioxygenases , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , Gene Expression Regulation , Genome , Humans , Mice , Mice, Transgenic , Proto-Oncogene Proteins/genetics , STAT4 Transcription Factor/genetics , STAT4 Transcription Factor/immunology , T-Box Domain Proteins/genetics , T-Box Domain Proteins/immunology , Th1 Cells/cytology , Th1 Cells/enzymology , Th17 Cells/cytology , Th17 Cells/enzymology
2.
J Immunol ; 204(5): 1334-1344, 2020 03 01.
Article in English | MEDLINE | ID: mdl-31953354

ABSTRACT

The IL1A and IL1B genes lie in close proximity on chromosome 2 near the gene for their natural inhibitor, IL1RN Despite diverse functions, they are all three inducible through TLR4 signaling but with distinct kinetics. This study analyzed transcriptional induction kinetics, chromosome looping, and enhancer RNA production to understand the distinct regulation of these three genes in human cells. IL1A, IL1B, and IL1RN were rapidly induced after stimulation with LPS; however, IL1B mRNA production was less inhibitable by iBET151, suggesting it does not use pause-release regulation. Surprisingly, chromatin looping contacts between IL1A and IL1B were highly intermingled, although those of IL1RN were distinct, and we focused on comparing IL1A and IL1B transcriptional pathways. Our studies demonstrated that enhancer RNAs were produced from a subset of the regulatory regions, that they were critical for production of the mRNAs, and that they bound a diverse array of RNA binding proteins, including p300 but not CBP. We, furthermore, demonstrated that recruitment of p300 was dependent on MAPKs. Integrator is another RNA binding protein recruited to the promoters and enhancers, and its recruitment was more dependent on NF-κB than MAPKs. We found that integrator and NELF, an RNA polymerase II pausing protein, were associated with RNA in a manner that facilitated interaction. We conclude that IL1A and IL1B share many regulatory contacts, signaling pathways, and interactions with enhancer RNAs. A complex of protein interactions with enhancer RNAs emphasize the role of enhancer RNAs and the overall structural aspects of transcriptional regulation.


Subject(s)
E1A-Associated p300 Protein/immunology , Interleukin 1 Receptor Antagonist Protein/immunology , Interleukin-1alpha/immunology , Interleukin-1beta/immunology , Lipopolysaccharides/pharmacology , Monocytes/immunology , RNA-Binding Proteins/immunology , Transcription, Genetic , Cell Line , E1A-Associated p300 Protein/genetics , Humans , Interleukin 1 Receptor Antagonist Protein/genetics , Interleukin-1alpha/genetics , Interleukin-1beta/genetics , RNA-Binding Proteins/genetics , Transcription, Genetic/drug effects , Transcription, Genetic/immunology
3.
Proc Natl Acad Sci U S A ; 114(36): 9701-9706, 2017 09 05.
Article in English | MEDLINE | ID: mdl-28831000

ABSTRACT

The genes encoding the histone acetyl-transferases (HATs) CREB binding protein (CREBBP) and EP300 are recurrently mutated in the activated B cell-like and germinal center (GC) B cell-like subtypes of diffuse large B cell lymphoma (DLBCL). Here, we introduced a patient mutation into a human DLBCL cell line using CRISPR and deleted Crebbp and Ep300 in the GC B cell compartment of mice. CREBBP-mutant DLBCL clones exhibited reduced histone H3 acetylation, expressed significantly less MHCII, and grew faster than wild-type clones in s.c. and orthotopic xenograft models. Mice lacking Crebbp in GC B cells exhibited hyperproliferation of their GC compartment upon immunization, had reduced MHCII surface expression on GC cells, and developed accelerated MYC-driven lymphomas. Ep300 inactivation reproduced some, but not all, consequences of Crebbp inactivation. MHCII deficiency phenocopied the effects of CREBBP loss in spontaneous and serial transplantation models of MYC-driven lymphomagenesis, supporting the idea that the mutational inactivation of CREBBP promotes immune evasion. Indeed, the depletion of CD4+ T cells greatly facilitated the engraftment of lymphoma cells in serial transplantation models. In summary, we provide evidence that both HATs are bona fide tumor suppressors that control MHCII expression and promote tumor immune control; mutational inactivation of CREBBP, but not of EP300, has additional cell-intrinsic engraftment and growth-promoting effects.


Subject(s)
CREB-Binding Protein/antagonists & inhibitors , CREB-Binding Protein/genetics , Lymphoma, Large B-Cell, Diffuse/genetics , Animals , B-Lymphocytes/immunology , B-Lymphocytes/pathology , CREB-Binding Protein/deficiency , CREB-Binding Protein/immunology , CRISPR-Cas Systems , Cell Line, Tumor , Cell Proliferation/genetics , Down-Regulation , E1A-Associated p300 Protein/antagonists & inhibitors , E1A-Associated p300 Protein/deficiency , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , Gene Deletion , Genes, MHC Class II , Germinal Center/immunology , Germinal Center/pathology , HLA Antigens/genetics , Heterografts , Histone Code/genetics , Humans , Lymphoma, Large B-Cell, Diffuse/immunology , Lymphoma, Large B-Cell, Diffuse/pathology , Mice , Mice, Inbred C57BL , Mice, Knockout , Mutation , Tumor Suppressor Proteins/antagonists & inhibitors , Tumor Suppressor Proteins/genetics , Tumor Suppressor Proteins/immunology
4.
Proc Natl Acad Sci U S A ; 113(21): E2993-3001, 2016 May 24.
Article in English | MEDLINE | ID: mdl-27162363

ABSTRACT

Antimicrobial peptides (AMP) are defense effectors of the innate immunity playing a crucial role in the intestinal homeostasis with commensals and protection against pathogens. Herein we aimed to investigate AMP gene regulation by deciphering specific characteristics allowing their enhanced expression among innate immune genes, particularly those encoding proinflammatory mediators. Our emphasis was on epigenetic regulation of the gene encoding the AMP ß-defensin 2 (HBD2), taken as a model of possibly specific induction, upon challenge with a commensal bacterium, compared with the proinflammatory cytokine IL-8. Using an in vitro model of colonic epithelial cells challenged with Escherichia coli K12, we showed that inhibition of histone deacetylases (HDAC) by trichostatin A dramatically enhanced induction of HBD2 expression, without affecting expression of IL-8. This mechanism was supported by an increased phosphorylation of histone H3 on serine S10, preferentially at the HBD2 promoter. This process occurred through activation of the IκB kinase complex, which also led to activation of NF-κB. Moreover, we demonstrated that NF-κB was modified by acetylation upon HDAC inhibition, partly by the histone acetyltransferase p300, and that both NF-κB and p300 supported enhanced induction of HBD2 expression. Furthermore, we identified additional genes belonging to antimicrobial defense and epithelial restitution pathways that showed a similar pattern of epigenetic control. Finally, we confirmed our finding in human colonic primary cells using an ex vivo organoid model. This work opens the way to use epigenetic pharmacology to achieve induction of epithelial antimicrobial defenses, while limiting the deleterious risk of an inflammatory response.


Subject(s)
E1A-Associated p300 Protein/antagonists & inhibitors , Epigenesis, Genetic/drug effects , Escherichia coli K12/immunology , Histone Deacetylase Inhibitors/pharmacology , Interleukin-8/immunology , beta-Defensins/immunology , Caco-2 Cells , E1A-Associated p300 Protein/immunology , Epigenesis, Genetic/immunology , Humans , NF-kappa B/immunology
5.
Biochem Biophys Res Commun ; 486(4): 1021-1026, 2017 05 13.
Article in English | MEDLINE | ID: mdl-28365154

ABSTRACT

Persistent fibroblast activation is a predominant feature of idiopathic pulmonary fibrosis (IPF), but the transcriptional and epigenetic mechanisms controlling this process are not well understood. Silent information regulator type-1 (Sirt1) is a member of class Ⅲ histone deacetylase with important regulatory roles in a variety of pathophysiologic processes, but its role in fibrotic lung diseases is not clearly elucidated. Sirt1 expression in lung tissues of IPF patients and in a mouse model of bleomycin (BLM)-induced lung fibrosis were evaluated by immunofluorescence. The function of Sirt1 in BLM-induced lung fibrosis in the mouse model or transforming growth factor ß1 (TGF-ß1)-mediated lung fibroblast cellular model was investigated by Sirt1 activation, overexpression and knockdown of Sirt1. Finally, the involvement of p300 signaling pathways was assessed. In this study, we found up-regulation of Sirt1 in BLM-induced lung fibrosis, as well as in the lungs of IPF patients, including in the aggregated pulmonary fibroblasts of fibrotic foci. Activation or overexpression of Sirt1 attenuated TGF-ß1-mediated lung fibroblast differentiation and activation and diminished the severity of experimental lung fibrosis in mice. Whereas knockdown of Sirt1 promoted the pro-fibrogenic activity of TGF-ß1 in lung fibroblasts. A potential mechanism for the role of Sirt1 in lung fibrosis was through regulating the expression of p300. Thus, we characterized Sirt1 as an important regulator of lung fibrosis and provides a proof of principle for activation or overexpression of Sirt1 as a potential novel therapeutic strategy for IPF.


Subject(s)
E1A-Associated p300 Protein/immunology , Fibroblasts/immunology , Pulmonary Fibrosis/immunology , Sirtuin 1/immunology , Animals , Fibroblasts/pathology , Humans , Mice , Mice, Inbred C57BL , Up-Regulation/immunology
6.
Pharmacol Res ; 121: 33-41, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28428115

ABSTRACT

Asthma and chronic obstructive pulmonary disease (COPD) are common chronic lung inflammatory diseases. Thrombin and interleukin (IL)-8/C-X-C chemokine ligand 8 (CXCL8) play critical roles in lung inflammation. Our previous study showed that c-Src-dependent IκB kinase (IKK)/IκBα/nuclear factor (NF)-κB and mitogen-activated protein kinase kinase kinase 1 (MEKK1)/extracellular signal-regulated kinase (ERK)/ribosomal S6 protein kinase (RSK)-dependent CAAT/enhancer-binding protein ß (C/EBPß) activation are involved in thrombin-induced IL-8/CXCL8 expression in human lung epithelial cells. In this study, we aimed to investigate the roles of p300 and C/EBPß-reliant IKKß expression in thrombin-induced IL-8/CXCL8 expression. Thrombin-induced increases in IL-8/CXCL8-luciferase activity and IL-8/CXCL8 release were inhibited by p300 small interfering (siRNA). Thrombin-caused histone H3 acetylation was attenuated by p300 siRNA. Stimulation of cells with thrombin for 12h resulted in increases in IKKß expression and phosphorylation in human lung epithelial cells. However, thrombin did not affect p65 expression. Moreover, 12h of thrombin stimulation produced increases in IKKß expression and phosphorylation, and IκBα phosphorylation, which were inhibited by C/EBPß siRNA. Finally, treatment of cells with thrombin caused increases in p300 and C/EBPß complex formation, p65 and C/EBPß complex formation, and recruitment of p300, p65, and C/EBPß to the IL-8/CXCL8 promoter. These results imply that p300-dependent histone H3 acetylation and C/EBPß-regulated IKKß expression contribute to thrombin-induced IL-8/CXCL8 expression in human lung epithelial cells. Results of this study will help clarify C/EBPß signaling pathways involved in thrombin-induced IL-8/CXCL8 expression in human lung epithelial cells.


Subject(s)
CCAAT-Enhancer-Binding Protein-beta/immunology , E1A-Associated p300 Protein/immunology , I-kappa B Kinase/genetics , Inflammation/immunology , Interleukin-8/genetics , Respiratory Mucosa/immunology , Thrombin/immunology , Cell Line , Epithelial Cells/cytology , Epithelial Cells/immunology , Epithelial Cells/metabolism , Gene Expression Regulation , Humans , Inflammation/genetics , Lung/cytology , Lung/immunology , Respiratory Mucosa/cytology , Respiratory Mucosa/metabolism
7.
Am J Respir Cell Mol Biol ; 53(5): 664-75, 2015 Nov.
Article in English | MEDLINE | ID: mdl-25867172

ABSTRACT

We have previously demonstrated increased airway smooth muscle (ASM) mass and airway hyperresponsiveness in whole-life vitamin D-deficient female mice. In this study, we aimed to uncover the molecular mechanisms contributing to altered lung structure and function. RNA was extracted from lung tissue of whole-life vitamin D-deficient and -replete female mice, and gene expression patterns were profiled by RNA sequencing. The data showed that genes involved in embryonic organ development, pattern formation, branching morphogenesis, Wingless/Int signaling, and inflammation were differentially expressed in vitamin D-deficient mice. Network analysis suggested that differentially expressed genes were connected by the hubs matrix metallopeptidase 9; NF-κ light polypeptide gene enhancer in B cells inhibitor, α; epidermal growth factor receptor; and E1A binding protein p300. Given our findings that developmental pathways may be altered, we investigated if the timing of vitamin D exposure (in utero vs. postnatal) had an impact on lung health outcomes. Gene expression was measured in in utero or postnatal vitamin D-deficient mice, as well as whole-life vitamin D-deficient and -replete mice at 8 weeks of age. Baseline lung function, airway hyperresponsiveness, and airway inflammation were measured and lungs fixed for lung structure assessment using stereological methods and quantification of ASM mass. In utero vitamin D deficiency was sufficient to increase ASM mass and baseline airway resistance and alter lung structure. There were increased neutrophils but decreased lymphocytes in bronchoalveolar lavage. Expression of inflammatory molecules S100A9 and S100A8 was mainly increased in postnatal vitamin D-deficient mice. These observations suggest that in utero vitamin D deficiency can alter lung structure and function and increase inflammation, contributing to symptoms in chronic diseases, such as asthma.


Subject(s)
Bronchial Hyperreactivity/immunology , Lung/immunology , Muscle, Smooth/immunology , Respiratory Hypersensitivity/immunology , Vitamin D Deficiency/immunology , Airway Remodeling/immunology , Airway Resistance/immunology , Animals , Bronchial Hyperreactivity/complications , Bronchial Hyperreactivity/genetics , Bronchial Hyperreactivity/metabolism , Bronchoalveolar Lavage Fluid/chemistry , Calgranulin A/genetics , Calgranulin A/immunology , Calgranulin B/genetics , Calgranulin B/immunology , Disease Models, Animal , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , ErbB Receptors/genetics , ErbB Receptors/immunology , Female , Gene Expression Regulation , Lung/metabolism , Lung/pathology , Lymphocytes/immunology , Lymphocytes/metabolism , Lymphocytes/pathology , Matrix Metalloproteinase 9/genetics , Matrix Metalloproteinase 9/immunology , Mice , Muscle, Smooth/metabolism , Muscle, Smooth/pathology , NF-kappa B/genetics , NF-kappa B/immunology , Neutrophils/immunology , Neutrophils/metabolism , Neutrophils/pathology , Peptide Initiation Factors/genetics , Peptide Initiation Factors/immunology , Pregnancy , Respiratory Hypersensitivity/complications , Respiratory Hypersensitivity/genetics , Respiratory Hypersensitivity/metabolism , Signal Transduction , Vitamin D Deficiency/complications , Vitamin D Deficiency/genetics , Vitamin D Deficiency/metabolism , Wnt Proteins/genetics , Wnt Proteins/immunology
8.
J Biol Chem ; 289(39): 26752-26761, 2014 Sep 26.
Article in English | MEDLINE | ID: mdl-25037220

ABSTRACT

Th2 memory lymphocytes have imprinted their Il4 genes epigenetically for expression in dependence of T cell receptor restimulation. However, in a given restimulation, not all Th cells with a memory for IL-4 expression express IL-4. Here, we show that in reactivated Th2 cells, the transcription factors NFATc2, NF-kB p65, c-Maf, p300, Brg1, STAT6, and GATA-3 assemble at the Il4 promoter in Th2 cells expressing IL-4 but not in Th2 cells not expressing it. NFATc2 is critical for assembly of this transcription factor complex. Because NFATc2 translocation into the nucleus occurs in an all-or-none fashion, dependent on complete dephosphorylation by calcineurin, NFATc2 controls the frequencies of cells reexpressing Il4, translates analog differences in T cell receptor stimulation into a digital decision for Il4 reexpression, and instructs all reexpressing cells to express the same amount of IL-4. This analog-to-digital conversion may be critical for the immune system to respond to low concentrations of antigens.


Subject(s)
Cell Nucleus/metabolism , Gene Expression Regulation/physiology , Interleukin-4/biosynthesis , NFATC Transcription Factors/metabolism , Response Elements/physiology , Th2 Cells/metabolism , Active Transport, Cell Nucleus/physiology , Adaptor Proteins, Signal Transducing/genetics , Adaptor Proteins, Signal Transducing/immunology , Adaptor Proteins, Signal Transducing/metabolism , Animals , Cell Nucleus/genetics , Cell Nucleus/immunology , DNA Helicases/genetics , DNA Helicases/immunology , DNA Helicases/metabolism , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , E1A-Associated p300 Protein/metabolism , GATA3 Transcription Factor/genetics , GATA3 Transcription Factor/immunology , GATA3 Transcription Factor/metabolism , Interleukin-4/genetics , Interleukin-4/immunology , Mice , Mice, Inbred BALB C , Mice, Transgenic , NFATC Transcription Factors/genetics , NFATC Transcription Factors/immunology , Nuclear Proteins/genetics , Nuclear Proteins/immunology , Nuclear Proteins/metabolism , Phosphorylation/physiology , Receptors, Antigen, T-Cell/genetics , Receptors, Antigen, T-Cell/immunology , Receptors, Antigen, T-Cell/metabolism , STAT6 Transcription Factor/genetics , STAT6 Transcription Factor/immunology , STAT6 Transcription Factor/metabolism , Th2 Cells/cytology , Th2 Cells/immunology , Transcription Factor RelA/genetics , Transcription Factor RelA/immunology , Transcription Factor RelA/metabolism , Transcription Factors/genetics , Transcription Factors/immunology , Transcription Factors/metabolism
9.
Blood ; 118(1): 69-79, 2011 Jul 07.
Article in English | MEDLINE | ID: mdl-21555743

ABSTRACT

CREB-binding protein (CREBBP) is important for the cell-autonomous regulation of hematopoiesis, including the stem cell compartment. In the present study, we show that CREBBP plays an equally pivotal role in microenvironment-mediated regulation of hematopoiesis. We found that the BM microenvironment of Crebbp(+/-) mice was unable to properly maintain the immature stem cell and progenitor cell pools. Instead, it stimulates myeloid differentiation, which progresses into a myeloproliferation phenotype. Alterations in the BM microenvironment resulting from haploinsufficiency of Crebbp included a marked decrease in trabecular bone that was predominantly caused by increased osteoclastogenesis. Although CFU-fibroblast (CFU-F) and total osteoblast numbers were decreased, the bone formation rate was similar to that found in wild-type mice. At the molecular level, we found that the known hematopoietic modulators matrix metallopeptidase-9 (MMP9) and kit ligand (KITL) were decreased with heterozygous levels of Crebbp. Lastly, potentially important regulatory proteins, endothelial cell adhesion molecule 1 (ESAM1) and cadherin 5 (CDH5), were increased on Crebbp(+/-) endothelial cells. Our findings reveal that a full dose of Crebbp is essential in the BM microenvironment to maintain proper hematopoiesis and to prevent excessive myeloproliferation.


Subject(s)
Bone Marrow/physiology , CREB-Binding Protein/genetics , Haploinsufficiency/physiology , Hematopoietic Stem Cells/physiology , Myelopoiesis/physiology , Animals , CREB-Binding Protein/immunology , CREB-Binding Protein/metabolism , Cell Differentiation/physiology , Cell Line , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , E1A-Associated p300 Protein/metabolism , Endothelial Cells/cytology , Endothelial Cells/physiology , Female , Femur/cytology , Femur/physiology , Hematopoietic Stem Cells/cytology , Heterozygote , Male , Matrix Metalloproteinase 9/metabolism , Mice , Mice, Inbred C57BL , Mice, Mutant Strains , Osteoclasts/cytology , Osteoclasts/physiology , Stem Cell Factor/metabolism , Stromal Cells/cytology , Stromal Cells/physiology
10.
J Immunol ; 187(5): 2476-83, 2011 Sep 01.
Article in English | MEDLINE | ID: mdl-21810609

ABSTRACT

Krüppel-associated box-associated protein 1 (KAP1) is thought to act mainly as a scaffold for protein complexes, which together silence transcription by triggering the formation of heterochromatin. Using small interfering RNA-mediated KAP1 knockdown, we found that endogenous KAP1 negatively regulated TNF-α-induced IL-6 production in HeLa cells. KAP1 is likely to modulate the binding of NF-κB to the IL-6 promoter because KAP1 knockdown enhanced TNF-α-induced NF-κB-luciferase activity, but not IκBα degradation. Of importance, we found negative regulatory effects of KAP1 on the serine phosphorylation of STAT3, the acetylation of NF-κB/p65 by p300, and the nuclear localization of NF-κB/p65. In addition, KAP1 associated with NF-κB/p65 and inhibited the binding between NF-κB/p65 and p300. Thus, KAP1 is likely to negatively control the acetylation of NF-κB/p65, which is critical for its nuclear retention. Taken together, KAP1 modulated the acetylation of NF-κB/p65 by interfering with the interactions among STAT3, p300, and NF-κB/p65, resulting in reduced IL-6 production after TNF-α stimulation. Our findings that KAP1 directly interacts with transcriptional factors are new, and will inform further research to elucidate KAP1 function.


Subject(s)
E1A-Associated p300 Protein/metabolism , Gene Expression Regulation , NF-kappa B/metabolism , Repressor Proteins/metabolism , STAT3 Transcription Factor/metabolism , Signal Transduction/genetics , Tumor Necrosis Factor-alpha/metabolism , Blotting, Western , Chromatin Immunoprecipitation , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , Enzyme-Linked Immunosorbent Assay , Gene Expression , HeLa Cells , Humans , Immunoprecipitation , Interleukin-6/genetics , Interleukin-6/immunology , Interleukin-6/metabolism , Microscopy, Fluorescence , NF-kappa B/genetics , NF-kappa B/immunology , RNA, Small Interfering , Repressor Proteins/genetics , Repressor Proteins/immunology , Reverse Transcriptase Polymerase Chain Reaction , STAT3 Transcription Factor/genetics , STAT3 Transcription Factor/immunology , Signal Transduction/immunology , Transcription, Genetic , Tripartite Motif-Containing Protein 28 , Tumor Necrosis Factor-alpha/genetics , Tumor Necrosis Factor-alpha/immunology
11.
J Exp Med ; 202(11): 1477-82, 2005 Dec 05.
Article in English | MEDLINE | ID: mdl-16314433

ABSTRACT

The expression of the Adenovirus serotype 5 (Ad5) E1A oncogene sensitizes tumor cells to natural killer (NK) cell-mediated killing and tumor rejection in vivo. These effects are dependent on the ability of E1A to bind the transcriptional coadaptor protein p300. To test the hypothesis that E1A up-regulates ligands recognized by the NKG2D-activating receptor, we stably transfected the highly tumorigenic mouse fibrosarcoma cell line MCA-205 with Ad5-E1A or a mutant form of E1A that does not interact with p300 (E1A-Deltap300). Ad5-E1A, but not E1A-Deltap300, up-regulated the expression of the NKG2D ligand retinoic acid early inducible (RAE)-1, but not murine ULBP-like transcript 1, another NKG2D ligand, in four independently derived MCA-205 transfectants. The up-regulation of RAE-1 by E1A targeted MCA-205 tumor cells to lysis by NK cells, resulting in NKG2D-dependent tumor rejection in vivo. Moreover, the up-regulation of NKG2D ligands by E1A was not limited to mouse tumor cells, as E1A also increased the expression of NKG2D ligands on primary baby mouse kidney cells, human MB435S breast cancer cells, and human H4 fibrosarcoma cells.


Subject(s)
Adenoviridae , Fibrosarcoma/immunology , Killer Cells, Natural/immunology , Receptors, Immunologic/immunology , Adenovirus E1A Proteins/genetics , Adenovirus E1A Proteins/immunology , Animals , Antineoplastic Agents/administration & dosage , Cell Line, Tumor , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , Genetic Vectors , Graft Rejection/genetics , Graft Rejection/immunology , Humans , Kidney/immunology , Mice , NK Cell Lectin-Like Receptor Subfamily K , Neoplasm Transplantation , Neoplasms, Experimental/immunology , Promoter Regions, Genetic/genetics , Promoter Regions, Genetic/immunology , Receptors, Immunologic/genetics , Receptors, Natural Killer Cell , Tretinoin/administration & dosage , Up-Regulation/drug effects , Up-Regulation/immunology
12.
Signal Transduct Target Ther ; 6(1): 10, 2021 01 11.
Article in English | MEDLINE | ID: mdl-33431788

ABSTRACT

Epigenetic alterations play an important role in tumor progression of diffuse large B-cell lymphoma (DLBCL). However, the biological relevance of epigenetic gene mutations on tumor microenvironment remains to be determined. The core set of genes relating to histone methylation (KMT2D, KMT2C, EZH2), histone acetylation (CREBBP, EP300), DNA methylation (TET2), and chromatin remodeling (ARID1A) were detected in the training cohort of 316 patients by whole-genome/exome sequencing (WGS/WES) and in the validation cohort of 303 patients with newly diagnosed DLBCL by targeted sequencing. Their correlation with peripheral blood immune cells and clinical outcomes were assessed. Underlying mechanisms on tumor microenvironment were investigated both in vitro and in vivo. Among all 619 DLBCL patients, somatic mutations in KMT2D (19.5%) were most frequently observed, followed by mutations in ARID1A (8.7%), CREBBP (8.4%), KMT2C (8.2%), TET2 (7.8%), EP300 (6.8%), and EZH2 (2.9%). Among them, CREBBP/EP300 mutations were significantly associated with decreased peripheral blood absolute lymphocyte-to-monocyte ratios, as well as inferior progression-free and overall survival. In B-lymphoma cells, the mutation or knockdown of CREBBP or EP300 inhibited H3K27 acetylation, downregulated FBXW7 expression, activated the NOTCH pathway, and downstream CCL2/CSF1 expression, resulting in tumor-associated macrophage polarization to M2 phenotype and tumor cell proliferation. In B-lymphoma murine models, xenografted tumors bearing CREBBP/EP300 mutation presented lower H3K27 acetylation, higher M2 macrophage recruitment, and more rapid tumor growth than those with CREBBP/EP300 wild-type control via FBXW7-NOTCH-CCL2/CSF1 axis. Our work thus contributed to the understanding of aberrant histone acetylation regulation on tumor microenvironment as an alternative mechanism of tumor progression in DLBCL.


Subject(s)
Lymphoma, Large B-Cell, Diffuse/immunology , Neoplasm Proteins/immunology , Signal Transduction/immunology , Tumor-Associated Macrophages/immunology , Animals , CREB-Binding Protein/genetics , CREB-Binding Protein/immunology , Chemokine CCL2/genetics , Chemokine CCL2/immunology , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , F-Box-WD Repeat-Containing Protein 7/genetics , F-Box-WD Repeat-Containing Protein 7/immunology , Female , Humans , Lymphoma, Large B-Cell, Diffuse/genetics , Macrophage Colony-Stimulating Factor/genetics , Macrophage Colony-Stimulating Factor/immunology , Male , Mice , Mice, Inbred NOD , Mice, SCID , Neoplasm Proteins/genetics , Receptors, Notch/genetics , Receptors, Notch/immunology , Signal Transduction/genetics , THP-1 Cells
13.
Aging (Albany NY) ; 12(3): 2132-2141, 2020 02 03.
Article in English | MEDLINE | ID: mdl-32012118

ABSTRACT

Bladder cancer is a leading cause of morbidity and mortality worldwide. Currently, immunotherapy has become a worthwhile therapy for bladder cancer. Tumor mutation burden (TMB) has been regarded as the most prevalent biomarker to predict immunotherapy. Bladder cancer is reported to have the third highest mutation rate. However, whether these gene mutations are related to TMB and immune response remain unknown. In this study, we downloaded somatic mutation data of bladder cancer from The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (ICGC) datasets, and found 11 frequently mutated genes were covered by both two cohorts including FGFR3, TTN, XIRP2, CREBBP, PIK3CA, TP53, MUC16, EP300 (E1A binding protein P300), ARID1A, ERBB2, and KDM6A. Among them, EP300 mutation was associated with higher TMB and indicated a favorable clinical prognosis. Furthermore, based on Gene set enrichment analysis (GSEA) and CIBERSORT algorithm, we observed that EP300 mutation upregulated signaling pathways involved in immune system and enhanced antitumor immune response. In conclusion, EP300 is frequently mutated in bladder cancer, and its mutation is associated with increased TMB and promotes antitumor immunity, which may serve as a biomarker to predict immune response.


Subject(s)
Biomarkers, Tumor/genetics , Carcinoma, Transitional Cell/genetics , E1A-Associated p300 Protein/genetics , Urinary Bladder Neoplasms/genetics , Aged , Carcinoma, Transitional Cell/immunology , China , Databases, Genetic , E1A-Associated p300 Protein/immunology , Female , Humans , Immunity/genetics , Male , Mutation , Proportional Hazards Models , United States , Urinary Bladder Neoplasms/immunology
14.
Cancer Res ; 79(15): 3916-3927, 2019 08 01.
Article in English | MEDLINE | ID: mdl-31182547

ABSTRACT

Regulatory T cells (Treg) are immunosuppressive and negatively impact response to cancer immunotherapies. CREB-binding protein (CBP) and p300 are closely related acetyltransferases and transcriptional coactivators. Here, we evaluate the mechanisms by which CBP/p300 regulate Treg differentiation and the consequences of CBP/p300 loss-of-function mutations in follicular lymphoma. Transcriptional and epigenetic profiling identified a cascade of transcription factors essential for Treg differentiation. Mass spectrometry analysis showed that CBP/p300 acetylates prostacyclin synthase, which regulates Treg differentiation by altering proinflammatory cytokine secretion by T and B cells. Reduced Treg presence in tissues harboring CBP/p300 loss-of-function mutations was observed in follicular lymphoma. Our findings provide novel insights into the regulation of Treg differentiation by CBP/p300, with potential clinical implications on alteration of the immune landscape. SIGNIFICANCE: This study provides insights into the dynamic role of CBP/p300 in the differentiation of Tregs, with potential clinical implications in the alteration of the immune landscape in follicular lymphoma.


Subject(s)
CREB-Binding Protein/immunology , E1A-Associated p300 Protein/immunology , Lymphoma, Follicular/immunology , T-Lymphocytes, Regulatory/cytology , T-Lymphocytes, Regulatory/immunology , Acetylation , CD4-Positive T-Lymphocytes/drug effects , CD4-Positive T-Lymphocytes/immunology , CD4-Positive T-Lymphocytes/metabolism , CREB-Binding Protein/antagonists & inhibitors , CREB-Binding Protein/genetics , Cell Differentiation/physiology , Down-Regulation , E1A-Associated p300 Protein/antagonists & inhibitors , E1A-Associated p300 Protein/genetics , Histones/metabolism , Humans , Lymphoma, Follicular/genetics , Lymphoma, Follicular/metabolism , Lymphoma, Follicular/pathology , Mutation , Pyrazoles/pharmacology , Pyridines/pharmacology , T-Lymphocytes, Regulatory/drug effects , T-Lymphocytes, Regulatory/metabolism , Transcription, Genetic , Transcriptome
15.
Methods Enzymol ; 611: 607-675, 2018.
Article in English | MEDLINE | ID: mdl-30471702

ABSTRACT

The structural and functional characterization of large multidomain signaling proteins containing long disordered linker regions represents special methodological and conceptual challenges. These proteins show extreme structural heterogeneity and have complex posttranslational modification patterns, due to which traditional structural biology techniques provide results that are often difficult to interpret. As demonstrated through the example of two such multidomain proteins, CREB-binding protein (CBP) and its paralogue, p300, even the expression and purification of such proteins are compromised by their extreme proteolytic sensitivity and structural heterogeneity. In this chapter, we describe the effective expression of CBP and p300 in a eukaryotic host, Sf9 insect cells, followed by their tandem affinity purification based on two terminal tags to ensure their structural integrity. The major focus of this chapter is on the development of novel accessory tools, single-domain camelid antibodies (nanobodies), for structural-functional characterization. Specific nanobodies against full-length CBP and p300 can specifically target their different regions and can be used for their marking, labeling, and structural stabilization in a broad range of in vitro and in vivo studies. Here, we describe four high-affinity nanobodies binding to the KIX and the HAT domains, either mimicking known interacting partners or revealing new functionally relevant conformations. As immunization of llamas results in nanobody libraries with a great sequence variation, deep sequencing and interaction analysis with different regions of the proteins provide a novel approach toward developing a panel of specific nanobodies.


Subject(s)
CREB-Binding Protein/analysis , E1A-Associated p300 Protein/analysis , Intrinsically Disordered Proteins/analysis , Single-Domain Antibodies/chemistry , Amino Acid Sequence , Animals , CREB-Binding Protein/genetics , CREB-Binding Protein/immunology , Camelids, New World , Cell Line , Chromatography, Affinity/methods , Chromatography, Gel/methods , Cloning, Molecular , E1A-Associated p300 Protein/genetics , E1A-Associated p300 Protein/immunology , Humans , Immunization , Intrinsically Disordered Proteins/genetics , Intrinsically Disordered Proteins/immunology , Protein Domains , Single-Domain Antibodies/immunology , Transfection/methods
16.
Sci Rep ; 6: 20481, 2016 Feb 09.
Article in English | MEDLINE | ID: mdl-26857726

ABSTRACT

The effect of antigen specific immunotherapy (SIT) on asthma is supposed to be improved. Published data indicate that administration of probiotics alleviates allergic diseases. B cells play important roles in the pathogenesis of allergic diseases. This study aims to modulate antigen specific B cell property by the administration of Clostridium butyrate (CB) in combination with SIT. The results showed that after a 3-month treatment, the total asthma clinical score and serum specific IgE were improved in the patients treated with SIT, which was further improved in those treated with both SIT and CB, but not in those treated with CB alone. Treatment with SIT and CB increased p300 and STAT3 activation, up regulated the IL-10 gene transcription and increased the frequency of peripheral antigen specific B cells. In conclusion, administration with SIT in combination with CB converts Der p 1 specific B cells to regulatory B cells in asthma patients allergic to Der p 1. The data suggest a potential therapeutic remedy in the treatment of allergic diseases.


Subject(s)
Antigens, Dermatophagoides/immunology , Arthropod Proteins/immunology , Asthma , B-Lymphocytes, Regulatory , Clostridium butyricum , Cysteine Endopeptidases/immunology , Immunoglobulin E , Immunotherapy/methods , Asthma/blood , Asthma/immunology , Asthma/therapy , B-Lymphocytes, Regulatory/immunology , B-Lymphocytes, Regulatory/metabolism , E1A-Associated p300 Protein/blood , E1A-Associated p300 Protein/immunology , Female , Humans , Immunoglobulin E/blood , Immunoglobulin E/immunology , Interleukin-10/blood , Interleukin-10/immunology , Male , STAT3 Transcription Factor/blood , STAT3 Transcription Factor/immunology
17.
Bone Marrow Transplant ; 47(9): 1206-11, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22231458

ABSTRACT

An adequate response of the innate immune system after allo-SCT is crucial for the clinical outcome of patients submitted to this procedure. EP300 is one of the key genes of the innate immune system (IIS). We evaluated the influence of gene variant A>G rs20551 in EP300 in donor and/or recipient on clinical results after HLA-identical sibling allo-SCT. Patients with AA gene variant had a lower relapse incidence (31 vs 48%, P=0.025; odds ratio (OR)=1.6, P=0.05), attained better disease-free survival (AA: 53% vs AG+GG: 24%, P=0.001; OR=1.8, P=0.01), and better OS (AA: 53% vs AG+GG: 34%, P=0.001; OR=1.9, P=0.007). This beneficial association was more evident when AA gene variant was present in both donor and patient. In healthy individuals, AA gene variant was associated with lower IL2 production after a mitogenic stimuli, higher CD4+ cell response after CMV infection, and higher expression of innate immune genes (IRF-3 and MIF), cell cycle genes (AURKB, CCNA2 and CCNB1), lymphocyte survival genes (NFAT5 and SLC38A2), and with a lower expression of P53 compared with recessive GG gene variant. These findings suggest a beneficial effect of the AA gene variant in rs20551 on clinical outcome after allo-SCT.


Subject(s)
E1A-Associated p300 Protein/genetics , Hematologic Neoplasms/genetics , Hematologic Neoplasms/surgery , Hematopoietic Stem Cell Transplantation/methods , Adolescent , Adult , Aged , Disease-Free Survival , E1A-Associated p300 Protein/immunology , HLA Antigens/immunology , Hematologic Neoplasms/immunology , Hematopoietic Stem Cell Transplantation/adverse effects , Humans , Middle Aged , Polymorphism, Single Nucleotide , Retrospective Studies , Risk Factors , Tissue Donors , Treatment Outcome , Young Adult
18.
Blood ; 110(5): 1570-7, 2007 Sep 01.
Article in English | MEDLINE | ID: mdl-17525285

ABSTRACT

Chronic inflammatory diseases often have residual CD8(+) T-cell infiltration despite treatment with systemic corticosteroids, which suggests divergent steroid responses between CD4(+) and CD8(+) cells. To examine steroid sensitivity, dexamethasone (DEX)-induced histone H4 lysine 5 (K5) acetylation and glucocorticoid receptor alpha (GCR alpha) translocation were evaluated. DEX treatment for 6 hours significantly induced histone H4 K5 acetylation in normal CD4(+) cells (P = .001) but not in CD8(+) cells. DEX responses were functionally impaired in CD8(+) compared with CD4(+) cells when using mitogen-activated protein kinase phosphatase (1 hour; P = .02) and interleukin 10 mRNA (24 hours; P = .004) induction as a readout of steroid-induced transactivation. Normal DEX-induced GCR alpha nuclear translocation and no significant difference in GCR alpha and GCR beta mRNA expression were observed in both T-cell types. In addition, no significant difference in SRC-1, p300, or TIP60 expression was found. However, activating transcription factor-2 (ATF2) expression was significantly lower in CD8(+) compared with CD4(+) cells (P = .009). Importantly, inhibition of ATF2 expression by small interfering RNA in CD4(+) cells resulted in inhibition of DEX-induced transactivation in CD4(+) cells. The data indicate refractory steroid-induced transactivation but similar steroid-induced transrepression of CD8(+) cells compared with CD4(+) cells caused by decreased levels of the histone acetyltransferase ATF2.


Subject(s)
Activating Transcription Factor 2/metabolism , Anti-Inflammatory Agents/pharmacology , CD8-Positive T-Lymphocytes/metabolism , Dexamethasone/pharmacology , Receptors, Glucocorticoid/metabolism , Transcriptional Activation/drug effects , Acetylation/drug effects , Activating Transcription Factor 2/antagonists & inhibitors , Activating Transcription Factor 2/immunology , Active Transport, Cell Nucleus/drug effects , Active Transport, Cell Nucleus/immunology , CD4-Positive T-Lymphocytes/immunology , CD4-Positive T-Lymphocytes/metabolism , CD8-Positive T-Lymphocytes/immunology , Cell Cycle Proteins/biosynthesis , Cell Cycle Proteins/immunology , Cell Nucleus/immunology , Cell Nucleus/metabolism , Dual Specificity Phosphatase 1 , E1A-Associated p300 Protein/biosynthesis , E1A-Associated p300 Protein/immunology , Gene Expression Regulation/drug effects , Gene Expression Regulation/immunology , Histone Acetyltransferases/biosynthesis , Histone Acetyltransferases/immunology , Histone Acetyltransferases/metabolism , Histones/immunology , Histones/metabolism , Humans , Immediate-Early Proteins/biosynthesis , Immediate-Early Proteins/immunology , Interleukin-10/biosynthesis , Interleukin-10/immunology , Lysine Acetyltransferase 5 , Nuclear Receptor Coactivator 1 , Phosphoprotein Phosphatases/biosynthesis , Phosphoprotein Phosphatases/immunology , Protein Phosphatase 1 , Protein Tyrosine Phosphatases/biosynthesis , Protein Tyrosine Phosphatases/immunology , RNA, Messenger/biosynthesis , RNA, Messenger/immunology , RNA, Small Interfering/pharmacology , Receptors, Glucocorticoid/immunology , Time Factors , Transcription Factors/biosynthesis , Transcription Factors/immunology , Transcriptional Activation/immunology
SELECTION OF CITATIONS
SEARCH DETAIL