Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 55
Filter
1.
Proc Natl Acad Sci U S A ; 113(9): 2466-71, 2016 Mar 01.
Article in English | MEDLINE | ID: mdl-26884209

ABSTRACT

Patients with inoperable or unresectable pancreatic neuroendocrine tumors (NETs) have limited treatment options. These rare human tumors often express somatostatin receptors (SSTRs) and thus are clinically responsive to certain relatively stable somatostatin analogs, such as octreotide. Unfortunately, however, this tumor response is generally short-lived. Here we designed a hybrid adeno-associated virus and phage (AAVP) vector displaying biologically active octreotide on the viral surface for ligand-directed delivery, cell internalization, and transduction of an apoptosis-promoting tumor necrosis factor (TNF) transgene specifically to NETs. These functional attributes of AAVP-TNF particles displaying the octreotide peptide motif (termed Oct-AAVP-TNF) were confirmed in vitro, in SSTR type 2-expressing NET cells, and in vivo using cohorts of pancreatic NET-bearing Men1 tumor-suppressor gene KO mice, a transgenic model of functioning (i.e., insulin-secreting) tumors that genetically and clinically recapitulates the human disease. Finally, preclinical imaging and therapeutic experiments with pancreatic NET-bearing mice demonstrated that Oct-AAVP-TNF lowered tumor metabolism and insulin secretion, reduced tumor size, and improved mouse survival. Taken together, these proof-of-concept results establish Oct-AAVP-TNF as a strong therapeutic candidate for patients with NETs of the pancreas. More broadly, the demonstration that a known, short, biologically active motif can direct tumor targeting and receptor-mediated internalization of AAVP particles may streamline the potential utility of myriad other short peptide motifs and provide a blueprint for therapeutic applications in a variety of cancers and perhaps many nonmalignant diseases as well.


Subject(s)
Bacteriophages/genetics , Dependovirus/genetics , Dependovirus/metabolism , Genetic Vectors , Neuroendocrine Tumors/therapy , Octreotide/administration & dosage , Pancreatic Neoplasms/therapy , Satellite Viruses/metabolism , Animals , Female , Ligands , Male , Mice , Mice, Transgenic
2.
Virus Genes ; 50(2): 340-4, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25537949

ABSTRACT

Single-stranded DNA geminiviruses replicate via double-stranded DNA intermediates forming mini-chromosomes that are targets for transcriptional gene silencing (TGS) in plants. The ability of the cotton leaf curl Kokhran virus (CLCuKoV)-cotton leaf curl Multan betasatellite (CLCuMuB) proteins, replication-associated protein (Rep), transcriptional activator protein (TrAP), C4, V2 and ßC1, to suppress TGS was investigated by using the Nicotiana benthamiana line 16-TGS (16-TGS) harbouring a transcriptionally silenced green fluorescent protein (GFP) transgene. Inoculation of 16-TGS plants with a recombinant potato virus X vector carrying Rep, TrAP or ßC1 resulted in re-expression of GFP. Northern blot analysis confirmed that the observed GFP fluorescence was associated with GFP mRNA accumulation. These results indicated that Rep, TrAP and ßC1 proteins of CLCuKoV-CLCuMuB can re-activate the expression of a transcriptionally silenced GFP transgene in N. benthamiana. Although Rep, TrAP, or ßC1 proteins have, for other begomoviruses or begomoviruses-betasatellites, been previously shown to have TGS suppressor activity, this is the first report demonstrating that a single begomovirus-betasatellite complex encodes three suppressors of TGS.


Subject(s)
Begomovirus/metabolism , Gene Silencing , Green Fluorescent Proteins/genetics , Nicotiana/genetics , Plants, Genetically Modified/genetics , Satellite Viruses/metabolism , Trans-Activators/metabolism , Viral Proteins/metabolism , Begomovirus/genetics , Green Fluorescent Proteins/metabolism , Plant Diseases/genetics , Plant Diseases/virology , Plants, Genetically Modified/metabolism , Plants, Genetically Modified/virology , Potexvirus/genetics , Potexvirus/metabolism , Satellite Viruses/genetics , Nicotiana/metabolism , Nicotiana/virology , Trans-Activators/genetics , Transcriptional Activation , Viral Proteins/genetics
3.
Arch Virol ; 159(8): 2109-13, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24610555

ABSTRACT

Betasatellites are geminivirus-associated single-stranded DNA molecules that play an important role in symptom modulation. A VIGS vector was developed by modifying cotton leaf curl Multan betasatellite (CLCuMB). CLCuMB DNA was modified by replacing the ßC1 gene with a multiple cloning site. The silencing ability of the modified CLCuMB was investigated by cloning a fragment of a host gene (Su) or a reporter transgene (uidA) into the modified CLCuMB and co-agroinoculation with cotton leaf curl Multan virus, cotton leaf curl Kokhran virus, and ageratum enation virus, separately. The inoculated Nicotiana tabacum, N. benthamiana, Solanum lycopersicum, Arabidopsis thaliana and Gossypium hirsutum plants showed efficient silencing of the cognate genes.


Subject(s)
Gene Silencing , Genetic Vectors/genetics , Gossypium/genetics , Nicotiana/genetics , Plant Diseases/genetics , Satellite Viruses/genetics , Solanum lycopersicum/genetics , Begomovirus/genetics , Crops, Agricultural/genetics , Crops, Agricultural/virology , Genetic Vectors/metabolism , Gossypium/virology , Solanum lycopersicum/virology , Plant Diseases/virology , Satellite Viruses/metabolism , Nicotiana/virology
4.
Am J Sports Med ; 52(5): 1336-1349, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38482805

ABSTRACT

BACKGROUND: Restoration of osteochondral defects is critical, because osteoarthritis (OA) can arise. HYPOTHESIS: Overexpression of insulin-like growth factor 1 (IGF-1) via recombinant adeno-associated viral (rAAV) vectors (rAAV-IGF-1) would improve osteochondral repair and reduce parameters of early perifocal OA in sheep after 6 months in vivo. STUDY DESIGN: Controlled laboratory study. METHODS: Osteochondral defects were created in the femoral trochlea of adult sheep and treated with rAAV-IGF-1 or rAAV-lacZ (control) (24 defects in 6 knees per group). After 6 months in vivo, osteochondral repair and perifocal OA were assessed by well-established macroscopic, histological, and immunohistochemical scoring systems as well as biochemical and micro-computed tomography evaluations. RESULTS: Application of rAAV-IGF-1 led to prolonged (6 months) IGF-1 overexpression without adverse effects, maintaining a significantly superior overall cartilage repair, together with significantly improved defect filling, extracellular matrix staining, cellular morphology, and surface architecture compared with rAAV-lacZ. Expression of type II collagen significantly increased and that of type I collagen significantly decreased. Subchondral bone repair and tidemark formation were significantly improved, and subchondral bone plate thickness and subarticular spongiosa mineral density returned to normal. The OA parameters of perifocal structure, cell cloning, and matrix staining were significantly better preserved upon rAAV-IGF-1 compared with rAAV-lacZ. Novel mechanistic associations between parameters of osteochondral repair and OA were identified. CONCLUSION: Local rAAV-mediated IGF-1 overexpression enhanced osteochondral repair and ameliorated parameters of perifocal early OA. CLINICAL RELEVANCE: IGF-1 gene therapy may be beneficial in repair of focal osteochondral defects and prevention of perifocal OA.


Subject(s)
Cartilage, Articular , Insulin-Like Growth Factor I , Osteoarthritis , Animals , Cartilage, Articular/drug effects , Cartilage, Articular/pathology , Dependovirus/genetics , Genetic Therapy , Insulin-Like Growth Factor I/genetics , Insulin-Like Growth Factor I/therapeutic use , Osteoarthritis/genetics , Osteoarthritis/therapy , Osteoarthritis/metabolism , Satellite Viruses/genetics , Satellite Viruses/metabolism , Sheep/genetics , X-Ray Microtomography
5.
PLoS Pathog ; 7(10): e1002329, 2011 Oct.
Article in English | MEDLINE | ID: mdl-22028660

ABSTRACT

DNA methylation is a fundamental epigenetic modification that regulates gene expression and represses endogenous transposons and invading DNA viruses. As a counter-defense, the geminiviruses encode proteins that inhibit methylation and transcriptional gene silencing (TGS). Some geminiviruses have acquired a betasatellite called DNA ß. This study presents evidence that suppression of methylation-mediated TGS by the sole betasatellite-encoded protein, ßC1, is crucial to the association of Tomato yellow leaf curl China virus (TYLCCNV) with its betasatellite (TYLCCNB). We show that TYLCCNB complements Beet curly top virus (BCTV) L2⁻ mutants deficient for methylation inhibition and TGS suppression, and that cytosine methylation levels in BCTV and TYLCCNV genomes, as well as the host genome, are substantially reduced by TYLCCNB or ßC1 expression. We also demonstrate that while TYLCCNB or ßC1 expression can reverse TGS, TYLCCNV by itself is ineffective. Thus its AC2/AL2 protein, known to have suppression activity in other geminiviruses, is likely a natural mutant in this respect. A yeast two-hybrid screen of candidate proteins, followed by bimolecular fluorescence complementation analysis, revealed that ßC1 interacts with S-adenosyl homocysteine hydrolase (SAHH), a methyl cycle enzyme required for TGS. We further demonstrate that ßC1 protein inhibits SAHH activity in vitro. That ßC1 and other geminivirus proteins target the methyl cycle suggests that limiting its product, S-adenosyl methionine, may be a common viral strategy for methylation interference. We propose that inhibition of methylation and TGS by ßC1 stabilizes geminivirus/betasatellite complexes.


Subject(s)
Adenosylhomocysteinase/genetics , Begomovirus/genetics , DNA Methylation , Gene Expression Regulation, Viral , Gene Silencing , Satellite Viruses/genetics , Adenosylhomocysteinase/metabolism , Begomovirus/metabolism , Begomovirus/pathogenicity , Gene Expression Regulation, Enzymologic , Host-Pathogen Interactions , Plant Diseases/genetics , Plant Diseases/virology , Satellite Viruses/metabolism , Satellite Viruses/pathogenicity , Transcription, Genetic , Two-Hybrid System Techniques , Viral Proteins/metabolism
6.
Plant Physiol ; 157(3): 1394-406, 2011 Nov.
Article in English | MEDLINE | ID: mdl-21885668

ABSTRACT

The ßC1 protein of tomato yellow leaf curl China ß-satellite functions as a pathogenicity determinant. To better understand the molecular basis of ßC1 in pathogenicity, a yeast two-hybrid screen of a tomato (Solanum lycopersicum) cDNA library was carried out using ßC1 as bait. ßC1 interacted with a tomato SUCROSE-NONFERMENTING1-related kinase designated as SlSnRK1. Their interaction was confirmed using a bimolecular fluorescence complementation assay in Nicotiana benthamiana cells. Plants overexpressing SnRK1 were delayed for symptom appearance and contained lower levels of viral and satellite DNA, while plants silenced for SnRK1 expression developed symptoms earlier and accumulated higher levels of viral DNA. In vitro kinase assays showed that ßC1 is phosphorylated by SlSnRK1 mainly on serine at position 33 and threonine at position 78. Plants infected with ßC1 mutants containing phosphorylation-mimic aspartate residues in place of serine-33 and/or threonine-78 displayed delayed and attenuated symptoms and accumulated lower levels of viral DNA, while plants infected with phosphorylation-negative alanine mutants contained higher levels of viral DNA. These results suggested that the SlSnRK1 protein attenuates geminivirus infection by interacting with and phosphorylating the ßC1 protein.


Subject(s)
Geminiviridae/pathogenicity , Satellite Viruses/pathogenicity , Solanum lycopersicum/enzymology , Solanum lycopersicum/virology , Viral Proteins/metabolism , DNA, Viral/metabolism , Geminiviridae/metabolism , Gene Expression Regulation, Plant , Solanum lycopersicum/genetics , Mutation/genetics , Phosphorylation , Phosphoserine/metabolism , Phosphothreonine/metabolism , Plant Diseases/virology , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Protein Binding , Protein Interaction Domains and Motifs , Satellite Viruses/metabolism , Subcellular Fractions/metabolism , Viral Proteins/chemistry
7.
Biochem J ; 435(1): 157-66, 2011 Apr 01.
Article in English | MEDLINE | ID: mdl-21208189

ABSTRACT

The genetic element pSSVx from Sulfolobus islandicus, strain REY15/4, is a hybrid between a plasmid and a fusellovirus. This plasmid-virus hybrid infects several species of the hyperthermophilic acidophilic crenarchaeon Sulfolobus. The open reading frame orfc68 of pSSVx encodes a 7.7 kDa protein that does not show significant sequence homology with any protein with known three-dimensional structure. EMSA (electrophoretic mobility-shift assay) experiments, DNA footprinting and CD analyses indicate that recombinant C68, purified from Escherichia coli, binds to two different operator sites that are located upstream of its own promoter. The three-dimensional structure, solved by a single-wavelength anomalous diffraction experiment on a selenomethionine derivative, shows that the protein assumes a swapped-hairpin fold, which is a distinctive fold associated with a family of prokaryotic transcription factors, such as AbrB from Bacillus subtilis. Nevertheless, C68 constitutes a novel representative of this family because it shows several peculiar structural and functional features.


Subject(s)
Fuselloviridae/metabolism , Plasmids/metabolism , Sulfolobus/virology , Transcription Factors/chemistry , Transcription Factors/metabolism , Viral Proteins/chemistry , Viral Proteins/metabolism , Amino Acid Sequence , Crystallography, X-Ray , DNA Footprinting , DNA, Intergenic/metabolism , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , DNA-Binding Proteins/isolation & purification , DNA-Binding Proteins/metabolism , Dimerization , Fuselloviridae/genetics , Molecular Sequence Data , Operator Regions, Genetic , Plasmids/genetics , Promoter Regions, Genetic , Protein Conformation , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Satellite Viruses/genetics , Satellite Viruses/metabolism , Selenomethionine/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Sulfolobus/metabolism , Transcription Factors/genetics , Transcription Factors/isolation & purification , Viral Proteins/genetics , Viral Proteins/isolation & purification
8.
Viruses ; 14(2)2022 01 24.
Article in English | MEDLINE | ID: mdl-35215816

ABSTRACT

Alphasatellites, which encode only a replication-associated protein (alpha-Rep), are frequently found to be non-essential satellite components associated with begomovirus/betasatellite complexes, and their presence can modulate disease symptoms and/or viral DNA accumulation during infection. Our previous study has shown that there are three types of alphasatellites associated with begomovirus/betasatellite complexes in Yunnan province in China and they encode three corresponding types of alpha-Rep proteins. However, the biological functions of alpha-Reps remain poorly understood. In this study, we investigated the biological functions of alpha-Reps in post-transcriptional gene silencing (PTGS) and transcriptional gene silencing (TGS) using 16c and 16-TGS transgenic Nicotiana benthamiana plants. Results showed that all the three types of alpha-Rep proteins were capable of suppressing the PTGS and reversing the TGS. Among them, the alpha-Rep of Y10DNA1 has the strongest PTGS and TGS suppressor activities. We also found that the alpha-Rep proteins were able to increase the accumulation of their helper virus during coinfection. These results suggest that the alpha-Reps may have a role in overcoming host defense, which provides a possible explanation for the selective advantage provided by the association of alphasatellites with begomovirus/betasatellite complexes.


Subject(s)
Begomovirus/metabolism , Plant Diseases/virology , Satellite Viruses/metabolism , Viral Proteins/metabolism , Amino Acid Sequence , Begomovirus/chemistry , Begomovirus/genetics , China , Plants, Genetically Modified/genetics , Plants, Genetically Modified/virology , Satellite Viruses/chemistry , Satellite Viruses/genetics , Sequence Alignment , Nicotiana/genetics , Nicotiana/virology , Viral Proteins/chemistry , Viral Proteins/genetics
9.
Mol Plant Microbe Interact ; 24(8): 973-83, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21751853

ABSTRACT

Begomoviruses (family Geminiviridae) are single-stranded DNA viruses transmitted by the whitefly Bemisia tabaci. Many economically important diseases in crops are caused by begomoviruses, particularly in tropical and subtropical environments. These include the betasatellite-associated begomoviruses causing cotton leaf curl disease (CLCuD) that causes significant losses to a mainstay of the economy of Pakistan, cotton. RNA interference (RNAi) or gene silencing is a natural defense response of plants against invading viruses. In counter-defense, viruses encode suppressors of gene silencing that allow them to effectively invade plants. Here, we have analyzed the ability of the begomovirus Cotton leaf curl Multan virus (CLCuMV) and its associated betasatellite, Cotton leaf curl Multan ß-satellite (CLCuMB) which, together, cause CLCuD, and the nonessential alphasatellite (Cotton leaf curl Multan alphasatellite [CLCuMA]) for their ability to suppress gene silencing in Nicotiana benthamiana. The results showed that CLCuMV by itself was unable to efficiently block silencing. However, in the presence of the betasatellite, gene silencing was entirely suppressed. Silencing was not affected in any way when infections included CLCuMA, although the alphasatellite was, for the first time, shown to be a target of RNA silencing, inducing the production in planta of specific small interfering RNAs, the effectors of silencing. Subsequently, using a quantitative real-time polymerase chain reaction assay and Northern blot analysis, the ability of all proteins encoded by CLCuMV and CLCuMB were assessed for their ability to suppress RNAi and the relative strengths of their suppression activity were compared. The analysis showed that the V2, C2, C4, and ßC1 proteins exhibited suppressor activity, with the V2 showing the strongest activity. In addition, V2, C4, and ßC1 were examined for their ability to bind RNA and shown to have distinct specificities. Although each of these proteins has, for other begomoviruses or betasatellites, been previously shown to have suppressor activity, this is the first time all proteins encoded by a geminiviruses (or begomovirus-betasatellite complex) have been examined and also the first for which four separate suppressors have been identified.


Subject(s)
Begomovirus/metabolism , Nicotiana/virology , Plant Leaves/virology , RNA Interference , Satellite Viruses/metabolism , Agrobacterium tumefaciens , Begomovirus/genetics , Gene Expression Regulation, Viral/physiology , Genes, Suppressor/physiology , Green Fluorescent Proteins/genetics , Host-Pathogen Interactions , Protein Binding , RNA, Viral/metabolism , Satellite Viruses/genetics , Nicotiana/genetics , Transgenes/physiology , Viral Proteins/genetics , Viral Proteins/metabolism
10.
Viruses ; 12(9)2020 08 27.
Article in English | MEDLINE | ID: mdl-32867300

ABSTRACT

P4 is a mobile genetic element (MGE) that can exist as a plasmid or integrated into its Escherichia coli host genome, but becomes packaged into phage particles by a helper bacteriophage, such as P2. P4 is the original example of what we have termed "molecular piracy", the process by which one MGE usurps the life cycle of another for its own propagation. The P2 helper provides most of the structural gene products for assembly of the P4 virion. However, when P4 is mobilized by P2, the resulting capsids are smaller than those normally formed by P2 alone. The P4-encoded protein responsible for this size change is called Sid, which forms an external scaffolding cage around the P4 procapsids. We have determined the high-resolution structure of P4 procapsids, allowing us to build an atomic model for Sid as well as the gpN capsid protein. Sixty copies of Sid form an intertwined dodecahedral cage around the T = 4 procapsid, making contact with only one out of the four symmetrically non-equivalent copies of gpN. Our structure provides a basis for understanding the sir mutants in gpN that prevent small capsid formation, as well as the nms "super-sid" mutations that counteract the effect of the sir mutations, and suggests a model for capsid size redirection by Sid.


Subject(s)
Bacteriophages/chemistry , Capsid Proteins/chemistry , Capsid/chemistry , Bacteriophages/genetics , Bacteriophages/metabolism , Capsid/metabolism , Capsid Proteins/genetics , Capsid Proteins/metabolism , Helper Viruses/chemistry , Helper Viruses/genetics , Helper Viruses/metabolism , Mutation , Protein Conformation , Satellite Viruses/chemistry , Satellite Viruses/genetics , Satellite Viruses/metabolism
11.
World J Gastroenterol ; 26(21): 2781-2791, 2020 Jun 07.
Article in English | MEDLINE | ID: mdl-32550754

ABSTRACT

Hepatitis D virus (HDV) is a global health threat with more than 15 million humans affected. Current treatment options are largely unsatisfactory leaving chronically infected humans at high risk to develop liver cirrhosis and hepatocellular carcinoma. HDV is the only human satellite virus known. It encodes only two proteins, and requires Hepatitis B virus (HBV) envelope protein expression for productive virion release and spread of the infection. How HDV could evolve and why HBV was selected as a helper virus remains unknown. Since the discovery of Na+-taurocholate co-transporting polypeptide as the essential uptake receptor for HBV and HDV, we are beginning to understand the interactions of HDV and the immune system. While HBV is mostly regarded a stealth virus, that escapes innate immune recognition, HBV-HDV coinfection is characterized by a strong innate immune response. Cytoplasmic RNA sensor melanoma differentiation antigen 5 has been reported to recognize HDV RNA replication and activate innate immunity. Innate immunity, however, seems not to impair HDV replication while it inhibits HBV. In this review, we describe what is known up-to-date about the interplay between HBV as a helper and HDV's immune evasion strategy and identify where additional research is required.


Subject(s)
Coinfection/immunology , Hepatitis B virus/immunology , Hepatitis B, Chronic/immunology , Hepatitis D, Chronic/immunology , Hepatitis Delta Virus/immunology , Immune Evasion , Carcinoma, Hepatocellular/immunology , Carcinoma, Hepatocellular/pathology , Carcinoma, Hepatocellular/virology , Coinfection/complications , Coinfection/pathology , Coinfection/virology , Hepatitis B virus/genetics , Hepatitis B virus/metabolism , Hepatitis B, Chronic/complications , Hepatitis B, Chronic/pathology , Hepatitis B, Chronic/virology , Hepatitis D, Chronic/complications , Hepatitis D, Chronic/pathology , Hepatitis D, Chronic/virology , Hepatitis Delta Virus/genetics , Hepatitis Delta Virus/metabolism , Hepatitis delta Antigens/immunology , Hepatitis delta Antigens/metabolism , Humans , Immunity, Innate , Interferon-Induced Helicase, IFIH1/metabolism , Liver/immunology , Liver/pathology , Liver/virology , Liver Cirrhosis/immunology , Liver Cirrhosis/pathology , Liver Cirrhosis/virology , Liver Neoplasms/immunology , Liver Neoplasms/pathology , Liver Neoplasms/virology , Organic Anion Transporters, Sodium-Dependent/metabolism , RNA, Viral/immunology , RNA, Viral/metabolism , Receptors, Pattern Recognition/immunology , Receptors, Pattern Recognition/metabolism , Satellite Viruses/genetics , Satellite Viruses/immunology , Satellite Viruses/metabolism , Symporters/metabolism , Virus Replication/immunology
12.
Virus Res ; 244: 75-83, 2018 01 15.
Article in English | MEDLINE | ID: mdl-29122644

ABSTRACT

Recent studies illustrate that fungi as virus hosts provides a unique platform for hunting viruses and exploring virus/virus and virus/host interactions. Such studies have revealed a number of as-yet-unreported viruses and virus/virus interactions. Among them is a unique intimate relationship between a (+)ssRNA virus, yado-kari virus (YkV1) and an unrelated dsRNA virus, yado-nushi virus (YnV1). YkV1 dsRNA, a replicated form of YkV1, and RNA-dependent RNA polymerase, are trans-encapsidated by the capsid protein of YnV1. While YnV1 can complete its replication cycle, YkV1 relies on YnV1 for its viability. We previously proposed a model in which YkV1 diverts YnV1 capsids as the replication sites. YkV1 is neither satellite virus nor satellite RNA, because YkV1 appears to encode functional RdRp and enhances YnV1 accumulation. This represents a unique mutualistic virus/virus interplay and similar relations in other virus/host fungus systems are detectable. We propose to establish the family Yadokariviridae that accommodates YkV1 and recently discovered viruses phylogenetically related to YkV1. This article overviews what is known and unknown about the YkV1/YnV1 interactions. Also discussed are the YnV1 Phytoreo_S7 and YkV1 2A-like domains that may have been captured via horizontal transfer during the course of evolution and are conserved across extant diverse RNA viruses. Lastly, evolutionary scenarios are envisioned for YkV1 and YnV1.


Subject(s)
Fungal Viruses/genetics , Fungi/virology , Phylogeny , RNA Viruses/genetics , RNA, Viral/genetics , Satellite Viruses/genetics , Amino Acid Sequence , Capsid Proteins/genetics , Capsid Proteins/metabolism , Evolution, Molecular , Fungal Viruses/classification , Fungal Viruses/isolation & purification , Fungal Viruses/metabolism , Gene Transfer, Horizontal , Microbial Interactions , RNA Viruses/classification , RNA Viruses/isolation & purification , RNA Viruses/metabolism , RNA, Double-Stranded/genetics , RNA, Double-Stranded/metabolism , RNA, Viral/metabolism , RNA-Dependent RNA Polymerase/genetics , RNA-Dependent RNA Polymerase/metabolism , Satellite Viruses/classification , Satellite Viruses/isolation & purification , Satellite Viruses/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Virus Replication
13.
Viruses ; 9(10)2017 09 29.
Article in English | MEDLINE | ID: mdl-28961220

ABSTRACT

Cotton leaf curl disease (CLCuD) is one of the most economically important diseases and is a constraint to cotton production in major producers, Pakistan and India. CLCuD is caused by monopartite plant viruses belonging to the family Geminiviridae (genus Begomovirus), in association with an essential, disease-specific satellite, Cotton leaf curl Multan betasatellite (CLCuMuB) belonging to a newly-established family Tolecusatellitidae (genus Betasatellite). CLCuMuB has a small genome (ca. 1350 nt) with a satellite conserved region, an adenine-rich region and a single gene that encodes for a multifunctional ßC1 protein. CLCuMuB ßC1 protein has a major role in pathogenicity and symptom determination, and alters several host cellular functions like autophagy, ubiquitination, and suppression of gene silencing, to assist CLCuD infectivity. Efficient trans-replication ability of CLCuMuB with several monopartite and bipartite begomoviruses, is also associated with the rapid evolution and spread of CLCuMuB. In this article we comprehensively reviewed the role of CLCuMuB in CLCuD, focusing on the ßC1 functions and its interactions with host proteins.


Subject(s)
Begomovirus/genetics , Genome, Viral , Gossypium/virology , Host-Pathogen Interactions , Satellite Viruses/genetics , Autophagy , DNA, Satellite , DNA, Viral/genetics , India , Pakistan , Phylogeny , Plant Diseases/virology , Satellite Viruses/metabolism , Sequence Analysis, DNA , Ubiquitination , Viral Proteins/genetics , Viral Proteins/metabolism
14.
Viruses ; 8(2)2016 Feb 02.
Article in English | MEDLINE | ID: mdl-26848679

ABSTRACT

Monopartite begomoviruses (Geminiviridae), which are whitefly-transmitted single-stranded DNA viruses known for causing devastating crop diseases, are often associated with satellite DNAs. Since begomovirus acquisition or exchange of satellite DNAs may lead to adaptation to new plant hosts and emergence of new disease complexes, it is important to investigate the diversity and distribution of these molecules. This study reports begomovirus-associated satellite DNAs identified during a vector-enabled metagenomic (VEM) survey of begomoviruses using whiteflies collected in various locations (California (USA), Guatemala, Israel, Puerto Rico, and Spain). Protein-encoding satellite DNAs, including alphasatellites and betasatellites, were identified in Israel, Puerto Rico, and Guatemala. Novel alphasatellites were detected in samples from Guatemala and Puerto Rico, resulting in the description of a phylogenetic clade (DNA-3-type alphasatellites) dominated by New World sequences. In addition, a diversity of small (~640-750 nucleotides) satellite DNAs similar to satellites associated with begomoviruses infecting Ipomoea spp. were detected in Puerto Rico and Spain. A third class of satellite molecules, named gammasatellites, is proposed to encompass the increasing number of reported small (<1 kilobase), non-coding begomovirus-associated satellite DNAs. This VEM-based survey indicates that, although recently recovered begomovirus genomes are variations of known genetic themes, satellite DNAs hold unexplored genetic diversity.


Subject(s)
Begomovirus/genetics , DNA, Satellite/genetics , DNA, Viral/genetics , Hemiptera/virology , Insect Vectors/virology , Satellite Viruses/genetics , Animals , Begomovirus/metabolism , DNA, Satellite/metabolism , DNA, Viral/metabolism , Genetic Variation , Hemiptera/classification , Metagenomics , Molecular Sequence Data , Phylogeny , Plant Diseases/virology , Satellite Viruses/metabolism
15.
Mol Plant Microbe Interact ; 17(3): 263-71, 2004 Mar.
Article in English | MEDLINE | ID: mdl-15000393

ABSTRACT

The capsid protein (CP) of satellite panicum mosaic virus (SPMV) has been implicated as a pathogenicity factor, inducing severe chlorosis on millet plants co-infected with SPMV and its helper virus, Panicum mosaic virus (PMV). In this study, we tested the effects of SPMV CP on Nicotiana benthamiana, a plant that does not support PMV+SPMV infections. SPMV CP expressed from a Potato virus X (PVX) gene vector elicited necrotic lesions on N. benthamiana. Pathogenicity factors often have the additional feature of acting as suppressors of gene silencing; therefore, several assays were developed to test if SPMV CP could act in such a capacity. The results showed that SPMV CP failed to act as a suppressor of posttranscriptional gene silencing when such tests were performed with transgenic N. benthamiana plants silenced for green fluorescent protein (GFP) expression by agroinfiltration or plant virus vectors. However SPMV CP expressed from the PVX gene vector did interfere with suppressor activity associated with PVX p25. This included a rebounded level of GFP silencing along the vascular tissues, including the veins on upper noninoculated leaves. Therefore, the roles of the SPMV CP now include encapsidation of the SPMV RNA, activity as a pathogenicity factor in both host and nonhost plants, and the enigmatic feature of interfering with suppression of gene silencing.


Subject(s)
Capsid Proteins/genetics , Gene Silencing/physiology , Mosaic Viruses/genetics , Nicotiana/genetics , Satellite Viruses/genetics , Capsid Proteins/metabolism , Gene Expression Regulation, Plant , Gene Expression Regulation, Viral , Genes, Suppressor/physiology , Genetic Vectors/genetics , Green Fluorescent Proteins , Helper Viruses/genetics , Helper Viruses/metabolism , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Mosaic Viruses/metabolism , Panicum/genetics , Panicum/virology , Plants, Genetically Modified , Potexvirus/genetics , Potexvirus/metabolism , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Satellite Viruses/metabolism , Nicotiana/metabolism
16.
FEBS Lett ; 485(1): 25-8, 2000 Nov 17.
Article in English | MEDLINE | ID: mdl-11086159

ABSTRACT

The interactions between satellite panicum mosaic virus (SPMV) capsid protein (CP) and its 824 nucleotide (nt) single stranded RNA were investigated by gel mobility shift assay and Northwestern blot assay. SPMV CP has specificity for its RNA at high affinity, but little affinity for non-viral RNA. The SPMV CP also bound a 350 nt satellite RNA (satRNA) that, like SPMV, is dependent on panicum mosaic virus for its replication. SPMV CP has the novel property of encapsidating SPMV RNA and satRNA. Competition gel mobility shift assays performed with a non-viral RNA and unlabeled SPMV RNA and satRNA revealed that these RNA:protein interactions were in part sequence specific.


Subject(s)
Capsid/metabolism , Mosaic Viruses/metabolism , Panicum/virology , RNA, Viral/metabolism , Satellite Viruses/metabolism , Capsid/isolation & purification , Centrifugation, Density Gradient , Mosaic Viruses/genetics , Satellite Viruses/genetics
17.
Biophys Chem ; 42(3): 249-56, 1992 Apr.
Article in English | MEDLINE | ID: mdl-1581521

ABSTRACT

Satellite tobacco necrosis virus (STNV) is an icosahedral virus which contains three classes of Ca2+ binding site. One of these classes, a five-fold carbonyl site which is believed to exist in a Ca2+ channel, has been investigated using laser-induced Eu3+ luminescence spectroscopy. These twelve identical sites are rather rigid, as evidenced by the single narrow (full width at half-maximum is 6.5 cm-1) band observed at 579.58 nm in the 7F0----5D0 excitation spectrum of the Eu(3+)-STNV complex. Lifetimes of 270 microseconds in H2O and 1620 microseconds in D2O indicate that there are three water molecules bound to the Eu3+ at this site. Ligand field splitting of the 7F0----5D1 and 7F0----5D2 excitation spectra show that this site possesses fairly high symmetry (less than or equal to C5V). The Eu3+ complex of nitrilotriacetic acid was determined via titration to have a dissociation constant, Kd, of 20 +/- 2 nM; this value has been used in competition experiments to deduce that the virus site class binds Eu3+ with a Kd of 1.1 +/- 0.3 nM. This putative ion channel demonstrates remarkable size selectivity, with lanthanide affinities varying by more than one order of magnitude.


Subject(s)
Calcium/metabolism , Plant Viruses/metabolism , Satellite Viruses/metabolism , Binding Sites , Cations, Divalent , Europium , Luminescent Measurements , Spectrum Analysis
18.
Plant Signal Behav ; 8(3): e23317, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23299332

ABSTRACT

Tomato Yellow Leaf Curl China virus spreads together with its invasive vector, the silverleaf whitefly B biotype, which exhibits higher growth rates on infected plants. Previous studies indicate that the virus satellite gene ßC1 accounts for the visible symptoms of infection and inhibits the constitutive expression of jasmonic acid (JA)--a phytohormone involved in plant defense against whiteflies--and of some JA-regulated genes. Here we present new details of the effects of on plant signaling and defense, obtained with (non-host) transgenic Arabidopsis thaliana and Nicotiana benthamiana plants. We found that JA induction in response to wounding was reduced in plants expressing ßC1. This result implies that ßC1 acts on conserved plant regulation mechanisms and might impair the entire JA defense pathway. Furthermore, transformed N. benthamiana plants exhibited elevated emissions of the volatile compound linalool, suggesting that ßC1 also influences plant-derived olfactory cues available to vector and non-vector insects.


Subject(s)
Arabidopsis/genetics , Cyclopentanes/metabolism , Disease Resistance/genetics , Genes, Viral , Hemiptera , Nicotiana/genetics , Oils, Volatile/metabolism , Oxylipins/metabolism , Acyclic Monoterpenes , Animals , Arabidopsis/metabolism , Arabidopsis/virology , Gene Expression Regulation, Plant , Herbivory , Solanum lycopersicum/genetics , Solanum lycopersicum/metabolism , Solanum lycopersicum/virology , Monoterpenes/metabolism , Plant Diseases/genetics , Plant Diseases/virology , Plants, Genetically Modified , Satellite Viruses/genetics , Satellite Viruses/metabolism , Signal Transduction , Nicotiana/metabolism , Nicotiana/virology
19.
Virus Res ; 167(1): 97-101, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22504338

ABSTRACT

DNA ß satellites are circular single-stranded molecules associated with some monopartite begomoviruses in the family Geminiviridae. They co-infect with their helper viruses to induce severe disease in economically important crops. The ßC1 protein encoded by DNA ß is a pathogenicity determinant and has been reported to suppress post-transcriptional gene silencing (PTGS). The ßC1 proteins from various DNA ß molecules show low levels of amino acid sequence conservation. We show here that the ßC1 from DNA ß associated with Cotton leaf curl Multan virus (CLCuMV) is a suppressor of systemic PTGS. When this DNA ß satellite co-inoculated with a heterologous helper virus, Tomato leaf curl virus (ToLCV), reduced the level of ToLCV siRNA and this was associated with a higher level of virus accumulation in infected tobacco plants. This may be a mechanism by which ßC1 protects a heterologous virus from host gene silencing.


Subject(s)
Begomovirus/metabolism , DNA, Viral/metabolism , Helper Viruses/physiology , Plant Diseases/genetics , RNA Interference , Satellite Viruses/metabolism , Viral Proteins/metabolism , Virus Replication , Begomovirus/genetics , DNA, Viral/genetics , Helper Viruses/genetics , Plant Diseases/virology , Satellite Viruses/genetics , Nicotiana/genetics , Nicotiana/virology , Viral Proteins/genetics
20.
J Virol ; 79(15): 9756-64, 2005 Aug.
Article in English | MEDLINE | ID: mdl-16014937

ABSTRACT

Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and spread in host plants. The SPMV RNA encodes a 17-kDa capsid protein (CP) that is essential for formation of its 16-nm virions. The results of this study indicate that in addition to the expression of the full-length SPMV CP from the 5'-proximal AUG start codon, SPMV RNA also expresses a 9.4-kDa C-terminal protein from the third in-frame start codon. Differences in solubility between the full-length protein and its C-terminal product were observed. Subcellular fractionation of infected plant tissues showed that SPMV CP accumulates in the cytosol, cell wall-, and membrane-enriched fractions. However, the 9.4-kDa protein exclusively cofractionated with cell wall- and membrane-enriched fractions. Earlier studies revealed that the 5'-untranslated region (5'-UTR) from nucleotides 63 to 104 was associated with systemic infection in a host-specific manner in millet plants. This study shows that nucleotide deletions and insertions in the 5'-UTR plus simultaneous truncation of the N-terminal part of the CP impaired SPMV spread in foxtail millet, but not in proso millet plants. In contrast, the expression of the full-length version of SPMV CP efficiently compensated the negative effect of the 5'-UTR deletions in foxtail millet. Finally, immunoprecipitation assays revealed the presence of a specific interaction between the capsid proteins of SPMV and its helper virus (PMV). Our findings show that the SPMV CP has several biological functions, including facilitating efficient satellite virus infection and movement in millet plants.


Subject(s)
Capsid Proteins/physiology , Helper Viruses/physiology , Mosaic Viruses/physiology , Satellite Viruses/physiology , Capsid Proteins/chemistry , Capsid Proteins/metabolism , Cell Membrane/metabolism , Cell Membrane/virology , Cell Wall/metabolism , Cell Wall/virology , Cytosol/metabolism , Cytosol/virology , Helper Viruses/chemistry , Molecular Weight , Mosaic Viruses/chemistry , Mosaic Viruses/metabolism , Movement , Panicum/virology , Plant Diseases/virology , RNA, Viral/biosynthesis , Satellite Viruses/chemistry , Satellite Viruses/metabolism , Subcellular Fractions/metabolism , Virus Assembly
SELECTION OF CITATIONS
SEARCH DETAIL