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1.
J Biol Chem ; 292(25): 10574-10585, 2017 06 23.
Article in English | MEDLINE | ID: mdl-28465351

ABSTRACT

Hepatocyte nuclear factor 4α (HNF4α) controls the expression of liver-specific protein-coding genes. However, some microRNAs are also modulated by HNF4α, and it is not known whether they are direct targets of HNF4α and whether they influence hepatic function. In this study, we found that HNF4α regulates microRNAs, indicated by marked down-regulation of miR-194 and miR-192 (miR-194/192) in liver-specific Hnf4a-null (Hnf4aΔH) mice. Transactivation of the shared miR-194/192 promoter was dependent on HNF4α expression, indicating that miR-194/192 is a target gene of HNF4α. Screening of potential mRNAs targeted by miR-194/192 revealed that expression of genes involved in glucose metabolism (glycogenin 1 (Gyg1)), cell adhesion and migration (activated leukocyte cell adhesion molecule (Alcam)), tumorigenesis and tumor progression (Rap2b and epiregulin (Ereg)), protein SUMOylation (Sumo2), epigenetic regulation (Setd5 and Cullin 4B (Cln4b)), and the epithelial-mesenchymal transition (moesin (Msn)) was up-regulated in Hnf4aΔH mice. Moreover, we also found that miR-194/192 binds the 3'-UTR of these mRNAs. siRNA knockdown of HNF4α suppressed miR-194/192 expression in human hepatocellular carcinoma (HCC) cells and resulted in up-regulation of their mRNA targets. Inhibition and overexpression experiments with miR-194/192 revealed that Gyg1, Setd5, Sumo2, Cln4b, and Rap2b are miR-194 targets, whereas Ereg, Alcam, and Msn are miR-192 targets. These findings reveal a novel HNF4α network controlled by miR-194/192 that may play a critical role in maintaining the hepatocyte-differentiated state by inhibiting expression of genes involved in dedifferentiation and tumorigenesis. These insights may contribute to the development of diagnostic markers for early HCC detection, and targeting of the miR-194/192 pathway could be useful for managing HCC.


Subject(s)
Gene Expression Regulation/physiology , Hepatocyte Nuclear Factor 4/metabolism , Hepatocytes/metabolism , MicroRNAs/metabolism , Signal Transduction/physiology , 3' Untranslated Regions/physiology , Activated-Leukocyte Cell Adhesion Molecule/biosynthesis , Activated-Leukocyte Cell Adhesion Molecule/genetics , Animals , Cell Transformation, Neoplastic/genetics , Cell Transformation, Neoplastic/metabolism , Epiregulin/biosynthesis , Epiregulin/genetics , Glucosyltransferases/biosynthesis , Glucosyltransferases/genetics , Glycoproteins/biosynthesis , Glycoproteins/genetics , Hepatocyte Nuclear Factor 4/genetics , Liver Neoplasms/genetics , Liver Neoplasms/metabolism , Mice , Mice, Mutant Strains , MicroRNAs/genetics , Microfilament Proteins/biosynthesis , Microfilament Proteins/genetics , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/genetics
2.
Protein Expr Purif ; 149: 31-36, 2018 09.
Article in English | MEDLINE | ID: mdl-29674116

ABSTRACT

Proteins and polypeptides represent nature's most complex and versatile polymer. They provide complicated shapes, diverse chemical functionalities, and tightly regulated and controlled sizes. Several disease states are related to the misfolding or overproduction of polypeptides and yet polypeptides are present in several therapeutic molecules. In addition to biological roles; short chain polypeptides have been shown to interact with and drive the bio-inspired synthesis or modification of inorganic materials. This paper outlines the development of a versatile cloning vector which allows for the expression of a short polypeptide by controlling the incorporation of a desired DNA coding insert. As a demonstration of the efficacy of the expression system, a solid binding polypeptide identified from M13 phage display was expressed and purified. The solid binding polypeptide was expressed as a soluble 6xHis-SUMO tagged construct. Expression was performed in E. coli using auto-induction followed by Ni-NTA affinity chromatography and ULP1 protease cleavage. Methodology demonstrates the production of greater than 8 mg of purified polypeptide per liter of E. coli culture. Isotopic labeling of the peptide is also demonstrated. The versatility of the designed cloning vector, use of the 6xHis-SUMO solubility partner, bacterial expression in auto-inducing media and the purification methodology make this expressionun vector a readily scalable and user-friendly system for the creation of desired peptide domains.


Subject(s)
Genetic Vectors/genetics , Peptides/genetics , Bacteriophage M13 , Cell Surface Display Techniques , DNA/genetics , Escherichia coli , Gene Expression , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/genetics , Solubility
3.
Nat Methods ; 11(11): 1161-9, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25262208

ABSTRACT

Cancer stem cells (CSCs) are thought to drive tumor growth, metastasis and chemoresistance. Although surface markers such as CD133 and CD44 have been successfully used to isolate CSCs, their expression is not exclusively linked to the CSC phenotype and is prone to environmental alteration. We identified cells with an autofluorescent subcellular compartment that exclusively showed CSC features across different human tumor types. Primary tumor-derived autofluorescent cells did not overlap with side-population (SP) cells, were enriched in sphere culture and during chemotherapy, strongly expressed pluripotency-associated genes, were highly metastatic and showed long-term in vivo tumorigenicity, even at the single-cell level. Autofluorescence was due to riboflavin accumulation in membrane-bounded cytoplasmic structures bearing ATP-dependent ABCG2 transporters. In summary, we identified and characterized an intrinsic autofluorescent phenotype in CSCs of diverse epithelial cancers and used this marker to isolate and characterize these cells.


Subject(s)
Biomarkers, Tumor/metabolism , Cell Separation/methods , Neoplastic Stem Cells/metabolism , Neoplastic Stem Cells/pathology , Optical Imaging/methods , Riboflavin/metabolism , ATP Binding Cassette Transporter, Subfamily G, Member 2 , ATP-Binding Cassette Transporters/metabolism , Animals , Autophagy , Autophagy-Related Protein 12 , Carcinoma, Hepatocellular/pathology , Carcinoma, Non-Small-Cell Lung/pathology , Carcinoma, Pancreatic Ductal/pathology , Colorectal Neoplasms/pathology , Female , Humans , Liver Neoplasms/pathology , Lung Neoplasms/pathology , Mice , Mice, Nude , Microtubule-Associated Proteins/biosynthesis , Neoplasm Proteins/metabolism , Pancreatic Neoplasms/pathology , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Tumor Cells, Cultured
4.
Microb Cell Fact ; 13: 178, 2014 Dec 31.
Article in English | MEDLINE | ID: mdl-25551787

ABSTRACT

BACKGROUND: Amphiphilic peptides are important building blocks to generate nanostructured biomaterials for drug delivery and tissue engineering applications. We have shown that the self-assembling peptide SA2 (Ac-AAVVLLLWEE) can be recombinantly produced in E. coli when fused to the small ubiquitin-like modifier (SUMO) protein. Although this system yielded peptides of high purity with no residual amino acids after cleavage of the SUMO fusion protein, the yield after purification was generally low (~1 mg/L bacterial culture) as compared to other peptides and proteins produced with the same method and under the same conditions. RESULTS: The aim of this study is to understand the underlying mechanisms causing the low yield of this recombinant peptide in E. coli and to optimize both production and purification of recombinant SA2 peptides. It was demonstrated that by simply changing the medium to a well-balanced auto-induction medium the yield of recombinant production was augmented (~4 fold). Moreover, it was demonstrated that self-assembly of SUMO-SA2 fusion proteins caused the low peptide yields after purification. By replacing the second IMAC purification step with a selective precipitation step, peptide yields could be increased approx. 3 fold. With these optimizations in place the overall yield of purified SA2 peptide increased with 12-fold. CONCLUSION: Premature self-assembly of the SUMO-SA2 fusion construct interfered with proper purification of the SA2 peptide, resulting in low yields of purified peptide and this could be prevented by changing the mode of purification. These findings are important when setting up purification schemes for other self-assembling peptides with the use of a SUMO fusion construct.


Subject(s)
Escherichia coli , Peptides , Small Ubiquitin-Related Modifier Proteins , Humans , Peptides/chemistry , Peptides/genetics , Peptides/isolation & purification , Peptides/metabolism , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/chemistry , Small Ubiquitin-Related Modifier Proteins/genetics , Small Ubiquitin-Related Modifier Proteins/isolation & purification
5.
Blood ; 115(14): 2827-34, 2010 Apr 08.
Article in English | MEDLINE | ID: mdl-19965618

ABSTRACT

Multiple myeloma (MM) is a plasma cell neoplasm that proceeds through a premalignant state of monoclonal gammopathy of unknown significance; however, the molecular events responsible for myelomagenesis remain uncharacterized. To identify cellular pathways deregulated in MM, we addressed that sumoylation is homologous to ubiquitination and results in the attachment of the ubiquitin-like protein Sumo onto target proteins. Sumoylation was markedly enhanced in MM patient lysates compared with normal plasma cells and expression profiling indicated a relative induction of sumoylation pathway genes. The Sumo-conjugating enzyme Ube2I, the Sumo-ligase PIAS1, and the Sumo-inducer ARF were elevated in MM patient samples and cell lines. Survival correlated with expression because 80% of patients with low UBE2I and PIAS1 were living 6 years after transplantation, whereas only 45% of patients with high expression survived 6 years. UBE2I encodes the sole Sumo-conjugating enzyme in mammalian cells and cells transfected with a dominant-negative sumoylation-deficient UBE2I mutant exhibited decreased survival after radiation exposure, impaired adhesion to bone marrow stroma cell and decreased bone marrow stroma cell-induced proliferation. UBE2I confers cells with multiple advantages to promote tumorigenesis and predicts decreased survival when combined with PIAS1. The sumoylation pathway is a novel therapeutic target with implications for existing proteasomal-based treatment strategies.


Subject(s)
Multiple Myeloma/metabolism , Plasma Cells/metabolism , Protein Processing, Post-Translational , SUMO-1 Protein/metabolism , Bone Marrow Cells/metabolism , Cell Adhesion/genetics , Cell Line, Tumor , Cell Survival/genetics , Disease-Free Survival , Female , Gene Expression Regulation, Neoplastic/genetics , Humans , Male , Multiple Myeloma/genetics , Multiple Myeloma/mortality , Multiple Myeloma/therapy , Mutation , Proteasome Endopeptidase Complex/genetics , Proteasome Endopeptidase Complex/metabolism , Protein Inhibitors of Activated STAT/biosynthesis , SUMO-1 Protein/genetics , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Stem Cell Transplantation , Stromal Cells/metabolism , Transplantation, Homologous , Ubiquitin-Conjugating Enzymes/biosynthesis
6.
Diabetes Metab Res Rev ; 28(2): 196-202, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22423385

ABSTRACT

BACKGROUND: Type 1 diabetes is a multi-factorial autoimmune disease that results from the destruction of insulin-producing ß cells of the pancreas; both genetic and environmental factors are thought to contribute to its development. Recently, a novel gene encoding small ubiquitin-like modifier protein 4 (SUMO4) was cloned and a single nucleotide substitution (M55V) was found to be strongly associated with type 1 diabetes. SUMO4 was shown to interact with IκBα and inhibit NFκB transcriptional activity. The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes. However, the effects of sumoylation on immune cells are poorly understood. METHODS: Human SUMO1, 2, 3, 4 and mouse SUMO2 (mSUMO2) were cloned and overexpressed in T and B cells using retroviral transduction. We then investigated whether SUMO overexpression affected their functions in vitro. To study the function of mSUMO2 in vivo, we made transgenic mice overexpressing mSUMO2 in T cells and pancreatic ß cells and compared them with transgenic mice expressing a super-repressor of NFκB (a dominant negative form of NFκB, IκBαΔN) in T cells. Diabetes was induced in the two groups of mice by i.p. injection of streptozotocin. RESULTS: Human SUMO1, 2, 3, 4 and mSUMO2 were all found to negatively regulate the transcriptional activity of T and B cells. Supporting this idea, mSUMO2 overexpression in T cells suppressed the production of both Th1 and Th2 cytokines unlike T cells from the IκBαΔN mice. However, transgenic mice overexpressing mSUMO2 had the same susceptibility to diabetes as wild type whereas the mice overexpressing IκBαΔN Tg were completely protected against diabetes. CONCLUSION: These results indicate that at least in T cells, whereas NFκB has pro-apoptotic activity, mSUMO2 plays a more complex role in the development of autoimmune diabetes. The relative influence of NFκB and sumoylation on the development of autoimmune diabetes in vivo may vary depending on the developmental stage and cell type.


Subject(s)
Diabetes Mellitus, Type 1/genetics , Small Ubiquitin-Related Modifier Proteins/physiology , Animals , Dendritic Cells/drug effects , Dendritic Cells/metabolism , Humans , I-kappa B Proteins/metabolism , Interleukin-12/biosynthesis , Mice , Mice, Transgenic , NF-KappaB Inhibitor alpha , NF-kappa B/metabolism , SUMO-1 Protein/physiology , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/genetics , Sumoylation , T-Lymphocytes/drug effects , T-Lymphocytes/metabolism
7.
Eur J Immunol ; 40(5): 1461-72, 2010 May.
Article in English | MEDLINE | ID: mdl-20162553

ABSTRACT

The induction of the autophagy machinery, a process for the catabolism of cytosolic proteins and organelles, constitutes a crucial mechanism in innate immunity. However, the involvement of autophagy in human neutrophils and the possible inducers of this process have not been completely elucidated. In this study, the induction of autophagy was examined in human neutrophils treated with various activators and detected by the formation of acidified autophagosomes through monodansylcadaverine staining and via LC-3B conversion screened by immunoblotting and immunofluorescence confocal microscopy. In addition, the expression of the ATG genes was assessed by real-time RT-PCR. We provide evidence that autophagy is implicated in human neutrophils in both a phagocytosis-independent (rapamycin, TLR agonists, PMA) and phagocytosis (Escherichia coli)-dependent initiation manner. ROS activation is a positive mechanism for autophagy induction in the case of PMA, TLR activation and phagocytosis. Furthermore, LC3B gene expression was uniformly upregulated, indicating a transcriptional level of regulation for the autophagic machinery. This study provides a stepping stone toward further investigation of autophagy in neutrophil-driven inflammatory disorders.


Subject(s)
Autophagy/physiology , Neutrophils/physiology , Adenine/analogs & derivatives , Adenine/pharmacology , Autophagy/drug effects , Autophagy/genetics , Cadaverine/analogs & derivatives , Cadaverine/analysis , Chromones/pharmacology , Coloring Agents/analysis , Escherichia coli , Guanosine/analogs & derivatives , Guanosine/pharmacology , Humans , Hydrogen-Ion Concentration , Inflammation/immunology , Microscopy, Confocal , Morpholines/pharmacology , Neutrophils/cytology , Neutrophils/drug effects , Phagosomes/physiology , Phagosomes/ultrastructure , Poly I-C/pharmacology , Reactive Oxygen Species/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction/drug effects , Sirolimus/pharmacology , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/genetics , Tetradecanoylphorbol Acetate/pharmacology , Toll-Like Receptors/drug effects , Toll-Like Receptors/physiology , Transcription, Genetic , Vacuoles/physiology
8.
Diabetes Metab Res Rev ; 27(8): 854-61, 2011 Nov.
Article in English | MEDLINE | ID: mdl-22069273

ABSTRACT

BACKGROUND: Type 1 diabetes is a multi-factorial autoimmune disease that results from the destruction of insulin-producing ß cells of the pancreas; both genetic and environmental factors are thought to contribute to its development. Recently, a novel gene encoding small ubiquitin-like modifier protein 4 (SUMO4) was cloned and a single nucleotide substitution (M55V) was found to be strongly associated with type 1 diabetes. SUMO4 was shown to interact with IκBα and inhibit NFκB transcriptional activity. The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes. However, the effects of sumoylation on immune cells are poorly understood. METHODS: Human SUMO1, 2, 3, 4 and mouse SUMO2 (mSUMO2) were cloned and overexpressed in dendritic, T and B cells using retroviral transduction. We then investigated whether SUMO overexpression affected their functions in vitro. To study the function of mSUMO2 in vivo, we made transgenic mice overexpressing mSUMO2 in T cells and pancreatic ß cells and compared them with transgenic mice expressing a super-repressor of NFκB (a dominant negative form of NFκB, IκBαΔN) in T cells. Diabetes was induced in the two groups of mice by i.p. injection of streptozotocin. RESULTS: Human SUMO1, 2, 3, 4 and mSUMO2 were all found to negatively regulate the transcriptional activity of T, B and dendritic cells. Although mSUMO2 overexpression in dendritic cells did not alter the expression of major histocompatibility complex class II proteins or B7, IL-1, IL-6 and IL-7, IL-12 expression decreased, switching Th1-directed immune responses into Th2 responses. Unlike T cells from the IκBαΔN mice, mSUMO2 overexpression in T cells suppressed the production of both Th1 and Th2 cytokines. Whereas the mice overexpressing IκBαΔN were completely protected against diabetes, those expressing mSUMO2 had the same susceptibility to diabetes as wild type. CONCLUSION: These results indicate that at least in T cells, whereas NFκB has pro-apoptotic activity, mSUMO2 plays a more complex role in the development of autoimmune diabetes. The relative influence of NFκB and sumoylation on the development of autoimmune diabetes in vivo may vary depending on the developmental stage and cell type.


Subject(s)
Diabetes Mellitus, Type 1/genetics , Small Ubiquitin-Related Modifier Proteins/physiology , Animals , Dendritic Cells/drug effects , Dendritic Cells/metabolism , Humans , I-kappa B Proteins/metabolism , Interleukin-12/biosynthesis , Mice , Mice, Transgenic , NF-KappaB Inhibitor alpha , NF-kappa B/metabolism , SUMO-1 Protein , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/genetics , Sumoylation , T-Lymphocytes/drug effects , T-Lymphocytes/metabolism
9.
J Pharmacol Exp Ther ; 329(2): 469-78, 2009 May.
Article in English | MEDLINE | ID: mdl-19208897

ABSTRACT

The present study aimed to produce and pathophysiologically evaluate the metallothionein (MT) fusion protein. A recombinant plasmid containing DNA segment coding the pET-glutathione transferase (GST)-small ubiquitin-related modifier (SUMO)-MT fusion protein was inserted into Escherichia coli for expression. The expression level of the fusion protein was very high, reaching to 38.4% of the total supernatant proteins from the organism. Subsequent filtration through glutathione Sepharose 4B gel and Sephadex G-25 yielded an MT fusion protein with purity more than 95%. When exposed to metals, E. coli containing the GST-SUMO-MT fusion protein showed an increased accumulation of Cd(2+), Zn(2+), or Cu(2+) at approximately 4.2, 4.0, or 1.6 times higher, respectively, than those containing the control protein. Administration of GST-SUMO-MT to mice that were also treated with D-galactose to induce neuronal and hepatic damage showed a significant improvement of animal learning and memory capacity, which was depressed in mice treated by D-galactose alone. Administration of MT fusion protein also prevented D-galactose-increased malondialdehyde contents and histopathological changes in the brain and liver. Furthermore, supplement of the fusion protein significantly prevented D-galactose-increased nitric oxide contents and -decreased superoxide dismutase activity in the brain, liver, and serum. The fusion protein was also able to prevent ionizing radiation-induced DNA damage of the mouse thymus. The present study indicates that GST-SUMO-MT has a normal metal binding feature and also significantly protects the multiple tissues against oxidative damage in vivo caused by chronic exposure to D-galactose and by ionizing radiation. Therefore, GST-SUMO-MT may be a potential candidate to be developed for the clinical application.


Subject(s)
Glutathione Transferase/biosynthesis , Liver/drug effects , Metallothionein/biosynthesis , Neurons/drug effects , Oxidative Stress/drug effects , Recombinant Fusion Proteins/pharmacology , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Animals , Antioxidants/metabolism , Brain/drug effects , Brain/enzymology , Brain/metabolism , Brain/pathology , Escherichia coli/genetics , Female , Galactose , Humans , Lipid Peroxides/metabolism , Liver/enzymology , Liver/metabolism , Liver/pathology , Male , Malondialdehyde/metabolism , Mice , Mice, Inbred Strains , Neurons/enzymology , Neurons/metabolism , Neurons/pathology , Nitric Oxide/metabolism , Polymerase Chain Reaction , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/isolation & purification , Superoxide Dismutase/metabolism
10.
Vet Immunol Immunopathol ; 128(4): 374-80, 2009 Apr 15.
Article in English | MEDLINE | ID: mdl-19117613

ABSTRACT

B cell activating factor (BAFF) belonging to the tumor necrosis factor (TNF) family is a novel member of the tumor necrosis factor ligand family and plays an important role in B lymphocyte maturation and survival. cDNA of dove B lymphocyte stimulator (doBAFF) was amplified from total RNA of dove spleen by RT-PCR (reverse transcription PCR). The open reading frame of doBAFF consists 867 bases encoding a protein of 288 amino acids. Sequence comparison indicated the amino acid sequence of doBAFF showed high identity to hBAFF (50.66%) and cBAFF (91.32%). The result of RT-PCR showed that doBAFF was highly expressed in the spleen and bursa of fabricius. To enhance the soluble expression of doBAFF in Escherichia coli, we fused the extracellular region of doBAFF gene with a small ubiquitin-related modifier gene (SUMO) by over-lap PCR. The resulting fused protein SUMO-sdoBAFF was highly expressed in DE3(BL21) with a molecular weight of 35kDa. The fusion protein was purified by Ni-NTA affinity chromatography and cleaved by a SUMO-specific protease, Ulp1. The sdoBAFF protein was further purified by Ni-NTA affinity chromatography. In vitro, the MTT assays indicated that the purified doBAFF as well as SUMO-sdoBAFF proteins were able to promote bursa lymphocyte survival in dose-dependent manner.


Subject(s)
B-Cell Activating Factor/genetics , B-Cell Activating Factor/immunology , Columbidae/genetics , Columbidae/immunology , Amino Acid Sequence , Animals , B-Cell Activating Factor/biosynthesis , Base Sequence , Blotting, Western , Bursa of Fabricius/immunology , Cloning, Molecular , Molecular Sequence Data , Molecular Weight , Phylogeny , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Sequence Alignment , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/genetics , Spleen/immunology
11.
Biotechnol Appl Biochem ; 54(1): 1-9, 2009 Jul 06.
Article in English | MEDLINE | ID: mdl-19575694

ABSTRACT

Antimicrobial peptides are an essential component of innate immunity and play an important role in host defence against microbial pathogens. They have received increasing attention recently as potential novel pharmaceutical agents. To meet the requirement for necessary basic science studies and clinical trials, large quantities of these peptides are needed. In general, isolation from natural sources and chemical synthesis are not cost-effective. The relatively low cost and easy scale-up of the recombinant approach renders it the most attractive means for large-scale production of antimicrobial peptides. Among the many systems available for protein expression, Escherichia coli remains the most widely used host. Antimicrobial peptides produced in E. coli are often expressed as fusion proteins, which effectively masks these peptides' potential lethal effect towards the bacterial host and protects the peptides from proteolytic degradation. Although some carriers confer peptide solubility, others promote the formation of inclusion bodies. The present minireview considers the most commonly used carrier proteins for fusion expression of antimicrobial peptides in E. coli. The favourable properties of SUMO (small ubiquitin-related modifier) as a novel fusion partner are also discussed.


Subject(s)
Antimicrobial Cationic Peptides/biosynthesis , Escherichia coli/metabolism , Protein Engineering/methods , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/chemistry , Amidophosphoribosyltransferase/biosynthesis , Amidophosphoribosyltransferase/chemistry , Amidophosphoribosyltransferase/genetics , Antimicrobial Cationic Peptides/chemistry , Antimicrobial Cationic Peptides/genetics , Escherichia coli/genetics , Glutathione Transferase/biosynthesis , Glutathione Transferase/chemistry , Glutathione Transferase/genetics , Recombinant Fusion Proteins/genetics , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/chemistry , Small Ubiquitin-Related Modifier Proteins/genetics , Thioredoxins/biosynthesis , Thioredoxins/chemistry , Thioredoxins/genetics
12.
Int J Immunogenet ; 36(1): 59-64, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19207937

ABSTRACT

Small ubiquitin-like modifiers (SUMOs) are structurally related to ubiquitin and are ligated to lysine residues within sumoylation target proteins. Currently, a growing body of evidence shows that the SUMO family has evolved as an important modifier of many proteins in a variety of cellular pathways. In this study, we have cloned cDNA encoding for three different pig SUMO isoforms. The full-length cDNA encoding for pig Sumo1, Sumo2 and Sumo4 consists of 306, 288 and 288 nucleotide base pairs of the open reading frame, respectively, and the putative amino acid sequences of pig Sumo1, Sumo2 and Sumo4 are composed of 101, 95 and 95 peptides, respectively. The structures of pig SUMOs are evolutionally well conserved, and their expression has been detected in a broad range of tissues. We also determined that all pig SUMOs are localized within the nucleus. However, the different tissue expression observed in individual pig SUMOs may show the divergent or specialized role of each of the pig SUMO isoforms. Future studies will focus on the identification of targets for sumoylation by different pig SUMO isoforms and the analysis of the functional consequences of sumoylation during the course of infectious diseases in pigs.


Subject(s)
Cell Nucleus/metabolism , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Sus scrofa/metabolism , Amino Acid Sequence , Animals , Base Sequence , CHO Cells , Cloning, Molecular , Cricetinae , Cricetulus , Gene Expression , Molecular Sequence Data , Phylogeny , Protein Isoforms/genetics , Protein Isoforms/metabolism , Sequence Alignment , Small Ubiquitin-Related Modifier Proteins/genetics , Sus scrofa/genetics
13.
J Cereb Blood Flow Metab ; 28(4): 674-83, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18059433

ABSTRACT

Autophagy is the chief machinery for bulk degradation of superfluous or aberrant cytoplasmic components. This study used the rat moderate fluid percussion injury model to investigate whether the autophagy pathway plays a key role after traumatic brain injury (TBI). Induction of autophagy is manifested by accumulation of autophagosomes (APs), observable under transmission electron microscopy (EM). Two hallmarks of autophagy, i.e., the microtubule-associated protein light chain 3 (LC3)-II and the autophagy-related gene (ATG)12-ATG5 conjugates, were explored by biochemical and confocal microscopic analyses of brain tissues. Under EM, both APs and autolysosomes were markedly accumulated in neurons from 4 h onward after TBI. Western blot analysis showed that ATG12-ATG5 conjugate was markedly redistributed during 5 to 15 days in brain tissues after TBI. LC3-II conjugate was initially unchanged but was drastically upregulated from 24 h onward in the pre-AP-containing fraction after TBI. LC-3 immunostaining was mainly located in living neurons under confocal microscopy. These results clearly show that the autophagy pathway is persistently activated after TBI. Because the autophagy pathway is the chief machinery for bulk elimination of aberrant cell components, we propose that activation of this pathway serves as a protective mechanism for maintaining cellular homeostasis after TBI.


Subject(s)
Autophagy/physiology , Brain Injuries/pathology , Brain Injuries/physiopathology , Neurons/ultrastructure , Animals , Blotting, Western , Gene Expression , Immunohistochemistry , Lysosomes/metabolism , Lysosomes/pathology , Male , Microscopy, Confocal , Microscopy, Electron, Transmission , Microtubule-Associated Proteins/biosynthesis , Rats , Rats, Sprague-Dawley , Small Ubiquitin-Related Modifier Proteins/biosynthesis
14.
J Cereb Blood Flow Metab ; 28(2): 269-79, 2008 Feb.
Article in English | MEDLINE | ID: mdl-17565359

ABSTRACT

A new group of proteins, small ubiquitin-like modifier (SUMO) proteins, has recently been identified and protein sumoylation has been shown to play a major role in various signal transduction pathways. Here, we report that transient global cerebral ischemia induces a marked increase in protein sumoylation. Mice were subjected to 10 mins severe forebrain ischemia followed by 3 or 6 h of reperfusion. Transient cerebral ischemia induced a massive increase in protein sumoylation by SUMO2/3 both in the hippocampus and cerebral cortex. SUMO2/3 conjugation was associated with a decrease in levels of free SUMO2/3. After ischemia, protein levels of the SUMO-conjugating enzyme Ubc9 were transiently decreased in the cortex but not in the hippocampus. We also exposed HT22 cells to arsenite, a respiratory poison that impairs cytoplasmic function and induces oxidative stress. Arsenite exposure induced a marked rise in protein sumoylation, implying that impairment of cytoplasmic function and oxidative stress may be involved in the massive post-ischemic activation of SUMO conjugation described here. Sumoylation of transcription factors has been shown to block their activation, with some exceptions such as the heat-shock factor and the hypoxia-responsive factor, where sumoylation blocks their degradation, and the nuclear factor-kappaB (NF-kappaB) essential modulator where sumoylation leads to an activation of NF-kappaB. Because protein sumoylation is known to be involved in the regulation of various biologic processes, the massive post-ischemic increase in protein sumoylation may play a critical role in defining the final outcome of neurons exposed to transient ischemia.


Subject(s)
Ischemic Attack, Transient/metabolism , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Animals , Blotting, Western , Cell Line , Cells, Cultured , Cysteine Endopeptidases , Endopeptidases/metabolism , Hippocampus/cytology , Hippocampus/metabolism , Male , Mice , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction , Small Ubiquitin-Related Modifier Proteins/genetics , Small Ubiquitin-Related Modifier Proteins/metabolism , Ubiquitin-Conjugating Enzymes/biosynthesis , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitins/metabolism
15.
Neuropharmacology ; 54(2): 280-9, 2008 Feb.
Article in English | MEDLINE | ID: mdl-17991493

ABSTRACT

Stroke is a major cause of death and disability, which involves excessive glutamate receptor activation leading to excitotoxic cell death. We recently reported that SUMOylation can regulate kainate receptor (KAR) function. Here we investigated changes in protein SUMOylation and levels of KAR and AMPA receptor subunits in two different animal stroke models: a rat model of focal ischemia with reperfusion and a mouse model without reperfusion. In rats, transient middle cerebral artery occlusion (MCAO) resulted in a striatal and cortical infarct. A dramatic increase in SUMOylation by both SUMO-1 and SUMO-2/3 was observed at 6h and 24h in the striatal infarct area and by SUMO-2/3 at 24h in the hippocampus, which was not directly subjected to ischemia. In mice, permanent MCAO resulted in a selective cortical infarct. No changes in SUMOylation occurred at 6h but there was increased SUMO-1 conjugation in the cortical infarct and non-ischemic hippocampus at 24h after MCAO. Interestingly, SUMOylation by SUMO-2/3 occurred only outside the infarct area. In both rat and mouse levels of KARs were only decreased in the infarct regions whereas AMPARs were decreased in the infarct and in other brain areas. These results suggest that posttranslational modification by SUMO and down-regulation of AMPARs and KARs may play important roles in the pathophysiological response to ischemia.


Subject(s)
Ischemic Attack, Transient/metabolism , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Animals , Blotting, Western , Cerebral Cortex/metabolism , Cerebral Cortex/physiology , Densitometry , Functional Laterality/physiology , Hippocampus/metabolism , Hippocampus/pathology , Infarction, Middle Cerebral Artery/metabolism , Infarction, Middle Cerebral Artery/pathology , Ischemic Attack, Transient/pathology , Mice , Neostriatum/metabolism , Rats , Rats, Wistar , Receptors, AMPA/metabolism , Receptors, Kainic Acid/metabolism , Receptors, Metabotropic Glutamate/metabolism
17.
Int J Oncol ; 31(3): 517-24, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17671677

ABSTRACT

The purpose of this research was to identify a molecular clue to tumor proliferation in oral squamous cell carcinoma (SCC) and to test the value as a predictive marker for prognosis. In cDNA array analysis, small ubiquitin-related modifier-1 (SUMO-1) was expressed at much higher levels in oral SCC tissue and oral SCC cell lines than normal oral epithelium. The result was confirmed by RT-PCR analysis and Western blot analysis. Transfection of the anti-SUMO-1 antisense oligonucleotide to oral SCC cells significantly reduced proliferation of the cells. Immunoprecipitation and Western blot analyses revealed that the oncoprotein Mdm2 was present predominantly as a form of SUMO-1 congestion (sumoylation) rather than as a non-sumoylated form in both oral SCC tissues and cell lines. Immunohistological analysis revealed that patients who showed coexpression of SUMO-1 and Mdm2 experienced more frequently local recurrence after initial treatments. Multivariate analysis confirmed that the dual-high expression of SUMO-1 and Mdm2 was an independent factor for local failure. These result suggested that overexpression of Mdm2 caused by overexpression of SUMO-1 may be involved in tumor aggressiveness even in patients with early stage oral SCC. SUMO-1 may be useful as a novel target for therapy in oral SCC as well as a clinical indicator for tumor recurrence together with Mdm2.


Subject(s)
Carcinoma, Squamous Cell/metabolism , Gene Expression Regulation, Neoplastic , Mouth Neoplasms/metabolism , Proto-Oncogene Proteins c-mdm2/biosynthesis , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Adult , Aged , Aged, 80 and over , Carcinoma, Squamous Cell/pathology , Cell Line, Tumor , Cell Proliferation , Disease Progression , Female , Humans , Male , Middle Aged , Mouth Neoplasms/pathology , Neoplasm Metastasis , SUMO-1 Protein
18.
Sheng Wu Gong Cheng Xue Bao ; 30(4): 658-68, 2014 Apr.
Article in Zh | MEDLINE | ID: mdl-25195255

ABSTRACT

Fibroblast growth factor -21 (FGF-21) is a recently discovered metabolic regulation factor, regulating glucose and lipid metabolism and increasing insulin sensitivity. FGF-21 is expected to be a potential anti-diabetic drug. Expression of FGF-21 as inclusion bodies has advantages for high yield and purity, but the bioactivity of the protein is almost totally lost after denature and renature. That is why FGF-21 is currently expressed in soluble form. As a result, the yield is considerably low. In this study, we used SUMO vector to express SUMO-human FGF-21 (SUMO-hFGF-21) in form of inclusion body. We optimized the culture conditions to increase the yield of the bioactive human fibroblast growth factor-21. We applied the hollow fiber membrane filtration column to enrich the bacteria, wash, denature and renature inclusion bodies. After affinity and gel filtration chromatography, we examined the hypoglycemic activity of FGF-21 by the glucose uptake assay in HepG2 cells. We also detected the blood glucose concentration of type 2 diabetic db/db model mice after short or long-term treatment. The results show that the yield of ihFGF-21 was 4 times higher than that of shFGF-21. The yield was 20 mg/L for ihFGF-21 vs. 6 mg/L for shFGF-21. The purity of ihFGF-21 was above 95%, while shFGF-21 was 90%. Compared with the traditional method of extracting inclusion bodies, the production cycle was about three times shortened by application of hollow fiber membrane filtration column technology, but the bioactivity did not significantly differ. This method provides an efficient and cost-effective strategy to the pilot and industrial production of hFGF-21.


Subject(s)
Fibroblast Growth Factors/biosynthesis , Hypoglycemic Agents/isolation & purification , Inclusion Bodies/metabolism , Animals , Bacteria/metabolism , Diabetes Mellitus, Experimental/drug therapy , Disease Models, Animal , Genetic Vectors , Glucose/metabolism , Hep G2 Cells , Humans , Mice , Recombinant Fusion Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/biosynthesis
19.
J Immunol Methods ; 403(1-2): 37-51, 2014 Jan 31.
Article in English | MEDLINE | ID: mdl-24291344

ABSTRACT

This is a first report of recombinant production of human prepro-Urocortin 2 in Escherichia coli by N-terminal fusion with a triple His6-SUMO-eXact tag and its subsequent use as an antigen for the production and screening of very high affinity monoclonal antibodies. The rationale for this combinatorial construct is that the His tag allows first step protein purification of insoluble and soluble proteins, the SUMO tag enhances protein expression level and solubility, while the eXact tag facilitates anion-triggered on-column cleavage of the triple tag to recover pure native proteins in a simple two-step protein purification procedure. Compared with an eXact fusion alone, the presence of the SUMO moiety enhanced overall expression levels by 4 to 10 fold but not the solubility of the highly basic prepro-Urocortin 2. Insoluble SUMO-eXact-preproUCN2 was purified in milligram quantities by denaturing IMAC and solubilized in native phosphate buffer by on-column refolding or step-wise dialysis. Only a small fraction of this solubilized protein was able to bind onto the eXact™ affinity column and cleaved by NaF treatment. To test whether binding and cleavage failure was due to improperly refolded SUMO-eXact-preproUCN2 or to the presence of N- and C-terminal sequences flanking the eXact moiety, we created a SUMO-eXact-thioredoxin construct which was overexpressed mainly in the soluble form. This protein bound to and was cleaved efficiently on the eXact™ column to yield native thioredoxin. Solubilized SUMO-eXact-preproUCN2 was used successfully to generate two high affinity mouse monoclonal antibodies (KD~10⁻¹° and 10⁻¹¹ M) specific to the pro-region of Urocortin 2.


Subject(s)
Antibodies, Monoclonal/biosynthesis , Cloning, Molecular/methods , Corticotropin-Releasing Hormone/biosynthesis , Escherichia coli/metabolism , Histidine/biosynthesis , Oligopeptides/biosynthesis , Protein Precursors/biosynthesis , Saccharomyces cerevisiae Proteins/biosynthesis , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Urocortins/biosynthesis , Amino Acid Sequence , Animals , Antibody Specificity , Chromatography, Affinity , Corticotropin-Releasing Hormone/administration & dosage , Corticotropin-Releasing Hormone/genetics , Corticotropin-Releasing Hormone/immunology , Escherichia coli/genetics , Histidine/genetics , Humans , Immunization , Injections , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Mutation , Oligopeptides/genetics , Protein Binding , Protein Denaturation , Protein Precursors/administration & dosage , Protein Precursors/genetics , Protein Precursors/immunology , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/immunology , Saccharomyces cerevisiae Proteins/genetics , Small Ubiquitin-Related Modifier Proteins/genetics , Solubility , Subtilisin/genetics , Subtilisin/metabolism , Urocortins/administration & dosage , Urocortins/genetics , Urocortins/immunology
20.
Int J Mol Med ; 34(2): 545-52, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24899049

ABSTRACT

We have previously reported that Tougu Xiaotong capsule (TXC) inhibits tidemark replication and cartilage degradation by regulating chondrocyte autophagy in vivo. Autophagy, a cell protective mechanism for maintaining cellular homeostasis, has been shown to be a constitutively active and protective process for chondrocyte survival. However, it remains unclear whether TXC promotes chondrocyte autophagy by regulating the autophagy-related (Atg)12/microtubule-associated protein 1 light chain 3 (LC3) conjugation systems. Thus, in the present study, we investigated the effects of TXC on primary chondrocytes treated with cobalt chloride (CoCl2). We found that CoCl2 induced a decrease in chondrocyte viability and the autophagosome formation of chondrocytes, indicating that CoCl2 induced autophagic death in a dose- and time-dependent manner. To determine the effects of TXC on CoCl2-exposed chondrocytes, we assessed cell viability by MTT assay. Our results revealed that TXC enhanced the viability of CoCl2-exposed chondrocytes. To gain insight into the mechanisms responsible for the enhancing effects of TXC on CoCl2-exposed chondrocytes, the expression of Atg genes was assessed in chondrocytes exposed to CoCl2 and treated with or without TXC. The results revealed that the expression of beclin 1, Atg3, Atg5, Atg7, Atg10, Atg12 and LC3 II/LC3 I in the chondrocytes treated with TXC increased, compared to that in the untreated chondrocytes. In addition, ultrastructural analysis indicated that treated chondrocytes contained more autophagosomes than the untreated cells, suggesting that TXC increased the formation of autophagosomes in the chondrocytes to clear the CoCl2-induced autophagic death. Therefore, these data suggest that TXC is a potential therapeutic agent for the reduction of cartilage degradation that occurs in osteoarthritis.


Subject(s)
Autophagy/drug effects , Drugs, Chinese Herbal/administration & dosage , Microtubule-Associated Proteins/biosynthesis , Osteoarthritis/drug therapy , Small Ubiquitin-Related Modifier Proteins/biosynthesis , Apoptosis/drug effects , Autophagy-Related Protein 12 , Cartilage/drug effects , Cartilage/metabolism , Cell Line , Chondrocytes/drug effects , Chondrocytes/metabolism , Cobalt/toxicity , Humans , Microtubule-Associated Proteins/metabolism , Osteoarthritis/metabolism , Osteoarthritis/pathology , Phagosomes/drug effects , Small Ubiquitin-Related Modifier Proteins/genetics
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