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1.
J Korean Med Sci ; 37(11): e88, 2022 Mar 21.
Article in English | MEDLINE | ID: mdl-35315599

ABSTRACT

Nasopharyngeal swabs have been widely to prevent the spread of coronavirus disease 2019 (COVID-19). Nasopharyngeal COVID-19 testing is a generally safe and well-tolerated procedure, but numerous complications have been reported in the media. Therefore, the present study aimed to review and document adverse events and suggest procedural references to minimize preventable but often underestimated risks. A total of 27 articles were selected for the review of 842 related documents in PubMed, Embase, and KoreaMed. The complications related to nasopharyngeal COVID-19 testing were reported to be rarely happened, ranging from 0.0012 to 0.026%. Frequently documented adverse events were retained swabs, epistaxis, and cerebrospinal fluid leakage, often associated with high-risk factors, including severe septal deviations, pre-existing skull base defects, and previous sinus or transsphenoidal pituitary surgery. Appropriate techniques based on sufficient anatomical knowledge are mandatory for clinicians to perform nasopharyngeal COVID-19 testing. The nasal floor can be predicted by the line between the nostril and external ear canal. For safe testing, the angle of swab insertion in the nasal passage should remain within 30° of the nasal floor. The swab was gently inserted along the nasal septum just above the nasal floor to the nasopharynx and remained on the nasopharynx for several seconds before removal. Forceful insertion should be attempted, and alternative examinations should be considered, especially in vulnerable patients. In conclusion, patients and clinicians should be aware of rare but possible complications and associated high-risk factors. The suggested procedural pearls enable more comfortable and safe nasopharyngeal COVID-19 testing for both clinicians and patients.


Subject(s)
COVID-19 Testing/methods , COVID-19/diagnosis , Nasopharynx/virology , SARS-CoV-2/isolation & purification , Specimen Handling/adverse effects , Humans , Nasal Cavity/anatomy & histology , Nasal Cavity/virology , Nasopharynx/anatomy & histology , Specimen Handling/methods
2.
Reprod Biomed Online ; 43(2): 193-195, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34172391

ABSTRACT

RESEARCH QUESTION: During the embryo transfer procedure, to what degree of temperature drop are embryos exposed to between loading the transfer catheter and placing it into the uterus? DESIGN: Twenty-nine simulated embryo transfer procedures were carried out across five clinics. A thermocouple probe was used for standardized measurements inside the embryo transfer catheter to investigate the change in temperature that occurred in the time period between loading and placing the catheter in the uterus. RESULTS: In all cases, the temperature at the loaded catheter tip fell rapidly to ambient temperature during transit from the embryo transfer workstation in the laboratory to the procedure room, even though embryo transfer procedures, ambient temperatures and embryo transfer catheter temperatures at loading varied between clinics. CONCLUSIONS: Given the sensitivity of the pre-implantation embryo to its immediate environment, the rapid and profound drop in temperature observed at the catheter tip that houses the embryo during transit from laboratory to the uterus may affect embryo viability and health. This issue should be addressed to ensure that the tight temperature control aimed for by IVF laboratories continues throughout the embryo transfer procedure, and could improve clinical outcomes.


Subject(s)
Embryo Transfer/adverse effects , Embryo, Mammalian/physiology , Specimen Handling/adverse effects , Temperature , Adult , Cell Survival/physiology , Embryo Transfer/methods , Embryonic Development/physiology , Female , Humans , Infant, Newborn , Infertility/therapy , Male , Pilot Projects , Pregnancy , Pregnancy Rate , Specimen Handling/methods , Treatment Outcome
3.
Pediatr Res ; 89(7): 1724-1731, 2021 05.
Article in English | MEDLINE | ID: mdl-32599608

ABSTRACT

BACKGROUND: Procedural pain is underestimated in hospitalized preterm infants. The aim of this study was to assess the reliability, validity, and clinical utility of the Neonatal Facial Coding System (NFCS), Douleur Aiguë du Nouveau-né (DAN) scale, Neonatal Infant Pain Scale (NIPS), and Premature Infant Pain Profile (PIPP) in premature infants undergoing heel blood collection. We assume that the four scales were similar in reliablility and validity (but different in clinical utility). METHODS: The pain assessments were performed on 111 premature infants using the four scales. Internal consistency was determined by Cronbach's α, and the reliability was determined by the intraclass correlation coefficients. Concurrent validity was evaluated by Spearman's rank correlations. Bland-Altman plots were used to investigate the convergent validity. RESULTS: The internal consistency and their reliability of the scales were high (p < 0.001). Scores were significantly higher at the time of blood collection (p < 0.001). Mean scores of clinical utility of PIPP were significantly higher than NFCS and DAN (p < 0.05) but not higher than the NIPS (p > 0.05). CONCLUSIONS: The four scales were reliable and valid. This study suggests that the PIPP and NIPS has good clinical utility and are better choice for evaluating procedural pain in premature infants. IMPACT: The aim of this study was to assess the reliability, validity, and clinical utility of NFCS, DAN, NIPS, and PIPP in premature infants undergoing heel blood collection. The results showed that the four scales have high reliability and internal consistency; the PIPP and NIPS have good clinical utility and are better choice for evaluating procedural pain in premature infants. Our study results provided a reference for clinical workers in choosing pain assessment scales and conduction intervention.


Subject(s)
Heel/blood supply , Pain Measurement/methods , Pain, Procedural/diagnosis , Specimen Handling/adverse effects , Humans , Infant, Newborn , Infant, Premature , Reproducibility of Results
4.
BMC Neurol ; 21(1): 266, 2021 Jul 05.
Article in English | MEDLINE | ID: mdl-34225676

ABSTRACT

BACKGROUND: Transient global amnesia (TGA) is a clinical syndrome characterized by a temporary short-term memory loss with inability to retain new memories, usually lasting 2 to 8 h. TGA may be related to several medical procedures, including angiography, general anesthesia, gastroscopy. CASE PRESENTATION: We report a 58-year-old woman who experiencing TGA one hour after the execution of her first-time nasopharyngeal swab for COVID-19. Brain MRI showed a typical punctate Diffusion Weight Image (DWI) hippocampal lesion. CONCLUSIONS: This is the first report of TGA after the execution of nasopharyngeal swab for COVID-19. This association lengthen the list of medical procedures associated with TGA, and we discuss the possible plausible mechanisms by which a nasopharyngeal swab could trigger TGA.


Subject(s)
Amnesia, Transient Global , COVID-19/diagnosis , Specimen Handling/adverse effects , Amnesia, Transient Global/diagnosis , Amnesia, Transient Global/etiology , COVID-19 Testing , Female , Humans , Magnetic Resonance Imaging , Middle Aged , Nasopharynx/virology
5.
Clin Lab ; 67(2)2021 Feb 01.
Article in English | MEDLINE | ID: mdl-33616332

ABSTRACT

BACKGROUND AND METHODS: 2019 Corona Virus Disease (COVID-19) caused by SARS-CoV-2 is still pandemic now. RT-qPCR detection was the most common method for the diagnosis of SARS-CoV-2 infection, facilitated by amounts of nucleic acid testing kits. However, the accuracy of nucleic acid detection is affected by various factors such as specimen collection, specimen preparation, reagents deficiency, and personnel quality. RESULTS: In this study, we found that unmatched virus preservation solution will inhibit N gene and OFR-1ab gene (two independent genes of SARS-CoV-2) amplification in one-step detection reagent. CONCLUSIONS: Despite just being a particular phenomenon we found in our work to fight 2019-nCoV, we concluded that unmatched virus preservation solution may have an inhibitory effect on SARS-CoV-2 nucleic acid detection which may lead to incorrect clinical diagnosis.


Subject(s)
COVID-19 Nucleic Acid Testing/methods , COVID-19 , Genes, Viral/drug effects , Organ Preservation Solutions/pharmacology , SARS-CoV-2 , Specimen Handling , COVID-19/diagnosis , COVID-19/virology , Diagnostic Errors/prevention & control , Humans , Reagent Kits, Diagnostic/standards , SARS-CoV-2/genetics , SARS-CoV-2/isolation & purification , Specimen Handling/adverse effects , Specimen Handling/methods
6.
BMC Genomics ; 21(1): 188, 2020 Feb 28.
Article in English | MEDLINE | ID: mdl-32111157

ABSTRACT

BACKGROUND: Next generation sequencing (NGS) can recover DNA data from valuable extant and extinct museum specimens. However, archived or preserved DNA is difficult to sequence because of its fragmented, damaged nature, such that the most successful NGS methods for preserved specimens remain sub-optimal. Improving wet-lab protocols and comprehensively determining the effects of sample age on NGS library quality are therefore of vital importance. Here, I examine the relationship between sample age and several indicators of library quality following targeted NGS sequencing of ~ 1300 loci using 271 samples of pinned moth specimens (Helicoverpa armigera) ranging in age from 5 to 117 years. RESULTS: I find that older samples have lower DNA concentrations following extraction and thus require a higher number of indexing PCR cycles during library preparation. When sequenced reads are aligned to a reference genome or to only the targeted region, older samples have a lower number of sequenced and mapped reads, lower mean coverage, and lower estimated library sizes, while the percentage of adapters in sequenced reads increases significantly as samples become older. Older samples also show the poorest capture success, with lower enrichment and a higher improved coverage anticipated from further sequencing. CONCLUSIONS: Sample age has significant, measurable impacts on the quality of NGS data following targeted enrichment. However, incorporating a uracil-removing enzyme into the blunt end-repair step during library preparation could help to repair DNA damage, and using a method that prevents adapter-dimer formation may result in improved data yields.


Subject(s)
High-Throughput Nucleotide Sequencing/veterinary , Moths/genetics , Specimen Handling/adverse effects , Animals , DNA Damage , Data Accuracy , Fossils , Museums , Polymerase Chain Reaction , Sequence Analysis, DNA
7.
Toxicol Pathol ; 48(3): 437-445, 2020 04.
Article in English | MEDLINE | ID: mdl-31896310

ABSTRACT

The handling-induced dark neuron is a histological artifact observed in brain samples handled before fixation with aldehydes. To explore associations between dark neurons and immunohistochemical alterations in mouse brains, we examined protein products encoded by Cav3 (neuronal perikarya/neurites), Rbbp4 (neuronal nuclei), Gfap (astroglia), and Aif1 (microglia) genes in adjacent tissue sections. Here, dark neurons were incidental findings from our prior project, studying the effects of age and high-fat diet on metabolic homeostasis in male C57BL/6N mice. Available were brains from 4 study groups: middle-aged/control diet, middle-aged/high-fat diet, old/control diet, and old/high-fat diet. Young/control diet mice were used as baseline. The hemibrains were immersion-fixed with paraformaldehyde and paraffin-embedded. In the hippocampal formation, we found negative correlations between dark neuron hyperbasophilia and immunoreactivity for CAV3, RBBP4, and glial fibrillary acidic protein (GFAP) using quantitative image analysis. There was no significant difference in dark neuron hyperbasophilia or immunoreactivity for any protein examined among all groups. In contrast, in the hippocampal fimbria, old age seemed to be associated with higher immunoreactivity for GFAP and allograft inflammatory factor-1. Our findings suggest that loss of immunohistochemical reactivity for CAV3, RBBP4, and GFAP in the hippocampal formation is an artifact associated with the occurrence of dark neurons. The unawareness of dark neurons may lead to misinterpretation of immunohistochemical reactivity alterations.


Subject(s)
Artifacts , Biomarkers/analysis , Immunohistochemistry , Neurons , Specimen Handling/adverse effects , Animals , Hippocampus/metabolism , Male , Mice , Mice, Inbred C57BL , Neurons/metabolism
8.
J Gastroenterol Hepatol ; 35(6): 1016-1022, 2020 Jun.
Article in English | MEDLINE | ID: mdl-31692119

ABSTRACT

BACKGROUND AND AIM: Avoiding abdominal incisions is one of the unique features of natural orifice specimen extraction (NOSE) surgery. There has been no consensus on whether the avoidance of abdominal incisions can reduce the systemic inflammatory response after NOSE surgery. This study was designed to evaluate the safety and feasibility of transanal NOSE, especially the inflammatory response after transanal NOSE versus mini-laparotomy (LAP). METHODS: A total of 172 colorectal cancer patients who underwent transanal NOSE were matched with 172 patients who underwent LAP for colorectal cancer. Clinical characteristics, pathological features, perioperative parameters, and indicators of the inflammatory response were collected and compared. The inflammatory response was assessed by measuring body temperature, neutrophil count, C-reactive protein levels, and procalcitonin levels. RESULTS: Patients in the NOSE group had better short-term outcomes, such as lower incidence of wound infection, less postoperative pain, less need for anesthetic drugs, and faster recovery of intestinal function. Regarding the inflammatory response, the average body temperature of patients in the NOSE group was higher on postoperative day (POD) 2 than that in the LAP group. A higher median neutrophil count and C-reactive protein levels were observed in the NOSE group on POD3 and POD5 than was observed in the LAP group. CONCLUSIONS: Transanal NOSE is safe and feasible for colorectal cancer, with better short-term outcomes. Although transanal NOSE produced a larger systemic inflammatory response than LAP in the early postoperative stages, this response did not appear to translate into infectious morbidity.


Subject(s)
Anal Canal/surgery , Colorectal Neoplasms/surgery , Laparoscopy , Natural Orifice Endoscopic Surgery/adverse effects , Natural Orifice Endoscopic Surgery/methods , Postoperative Complications/etiology , Postoperative Complications/prevention & control , Specimen Handling/adverse effects , Specimen Handling/methods , Adolescent , Adult , Aged , Feasibility Studies , Female , Humans , Inflammation/etiology , Inflammation/prevention & control , Laparotomy/adverse effects , Laparotomy/methods , Male , Middle Aged , Safety , Young Adult
9.
J Cutan Pathol ; 47(8): 675-680, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32159867

ABSTRACT

BACKGROUND: Objective methods for distinguishing melanoma in situ (MIS) from photodamaged skin (PS) are needed to guide treatment in patients with melanocytic proliferations. Melanocyte density (MD) could serve as an objective histopathological criterion in difficult cases. Calculating MD via manual cell counts (MCC) with immunohistochemical (IHC)-stained slides has been previously published. However, the clinical application of this method is questionable, as quantification of MD via MCC on difficult cases is time consuming, especially in high volume practices. METHODS: ImageJ is an image processing software that uses scanned slide images to determine cell count. In this study, we compared MCC to ImageJ calculated MD in microphthalmia transcription factor-IHC stained MIS biopsies and control PS acquired from the same patients. RESULTS: We found a statistically significant difference in MD between PS and MIS as measured by both MCC and ImageJ software (P < 0.01). Additionally, no statistically significant difference was found when comparing MD measurements recorded by ImageJ vs those determined by the MCC method. CONCLUSION: MD as determined by ImageJ strongly correlates with the MD calculated by MCC. We propose the use of ImageJ as a time-efficient, objective, and reproducible tool to assess MD.


Subject(s)
Image Processing, Computer-Assisted/methods , Melanocytes/pathology , Melanoma/pathology , Skin Neoplasms/pathology , Skin/radiation effects , Software/standards , Biopsy , Cell Count/methods , Humans , Immunohistochemistry/methods , Melanocytes/cytology , Microphthalmia-Associated Transcription Factor/immunology , Microphthalmia-Associated Transcription Factor/metabolism , Retrospective Studies , Sampling Studies , Skin/pathology , Software/statistics & numerical data , Specimen Handling/adverse effects , Time Factors , Melanoma, Cutaneous Malignant
10.
Clin Gastroenterol Hepatol ; 17(4): 647-656.e1, 2019 03.
Article in English | MEDLINE | ID: mdl-30099104

ABSTRACT

BACKGROUND & AIMS: Diagnosis and surveillance of Barrett's esophagus (BE) and eosinophilic esophagitis (EoE) have become emerging public health issues. Cytosponge is a novel, minimally invasive esophageal cell collection device. We aimed to assess the data on safety and acceptability of this device. METHODS: We performed a patient-level review of 5 prospective trials assessing Cytosponge performance in patients with reflux disease, BE and EoE in primary and secondary care. Acceptability of Cytosponge and subsequent endoscopy were recorded with visual analogue scale (VAS), wherein 0 and 10 denoted lowest and highest acceptability. Median VAS scores were compared using a Mann-Whitney test. The number of attempts, failures in swallowing the device and occurrence of adverse events were analyzed. Risk factors for failure in swallowing were analyzed using a multivariate regression model. RESULTS: In total, 2672 Cytosponge procedures were performed, in 2418 individuals from 2008 through 2017. There were 2 adverse events related to the device: a minor pharyngeal bleed and a case of detachment (<1:2000). The median acceptability score for the Cytosponge was 6.0 (interquartile range [IQR], 5.0-8.0), which was higher than the score for endoscopy without sedation (median 5.0; IQR, 3.0-7.0; P < .001) and lower than the score for endoscopy with sedation (median 8.0; IQR, 5.0-9.0; P < .001). Nearly all patients (91.1%) successfully swallowed the Cytosponge, most on the first attempt (90.1%). Failure to swallow the device was more likely to occur in secondary care (odds ratio, 5.13; 95% CI, 1.48-17.79; P < .01). CONCLUSIONS: The Cytosponge test is a safe procedure with good acceptability ratings in a variety of health care settings.


Subject(s)
Barrett Esophagus/diagnosis , Cytological Techniques/methods , Eosinophilic Esophagitis/diagnosis , Equipment and Supplies , Patient Acceptance of Health Care/statistics & numerical data , Patient Safety/statistics & numerical data , Specimen Handling/methods , Aged , Cytological Techniques/instrumentation , Female , Humans , Male , Mass Screening/adverse effects , Mass Screening/instrumentation , Mass Screening/methods , Middle Aged , Prospective Studies , Retrospective Studies , Risk Factors , Specimen Handling/adverse effects , Specimen Handling/instrumentation
11.
Dig Dis Sci ; 64(1): 241-248, 2019 01.
Article in English | MEDLINE | ID: mdl-30039240

ABSTRACT

BACKGROUND: A new device with metallic wires for scrape cytology was developed. AIMS: To compare the diagnostic performance of scrape cytology and conventional cytology during endoscopic retrograde cholangiopancreatography for biliary strictures. METHODS: A total of 420 cases with biliary stricture underwent transpapillary bile cytology. Among them, there are 79 cases with scrape cytology using the new device (scrape group) and 341 cases with conventional cytology (control group). Seventy-two and 174 cases underwent biliary biopsy at the same time as bile cytology in the scrape and control group, respectively. RESULTS: The sensitivity for malignancy of bile cytology in the scrape and control group was 41.2% [pancreatic cancer (PC): 23.1%, biliary cancer (BC): 52.5%] and 27.1% (PC: 16.3%, BC: 38.0%), respectively (P = 0.023). When analyzed PC and BC, respectively, there was no significant difference between the two groups. In the both groups, the sensitivity was significantly higher for BC than PC. In the scrape group, there was no difference in the sensitivity between cytology and biopsy [39.7% (PC: 17.4%, BC: 55.3%)], but in the control group, a significantly lower sensitivity was observed with cytology than biopsy (36.4% (PC: 19.7%, BC: 50.0%)) (P = 0.046). When analyzed PC and BC, respectively, there was no significant difference between cytology and biopsy. The sensitivity of combined cytology and biopsy was 55.6% (PC: 30.4%, BC: 71.1%) in the scrape group and 47.0% (PC: 24.6%, BC: 64.3%) in the control group. CONCLUSION: Scrape bile cytology for biliary strictures may be superior to conventional cytology.


Subject(s)
Bile Ducts/pathology , Cholangiopancreatography, Endoscopic Retrograde/instrumentation , Cholestasis/pathology , Specimen Handling/instrumentation , Aged , Aged, 80 and over , Biopsy , Case-Control Studies , Cholangiopancreatography, Endoscopic Retrograde/adverse effects , Cholangiopancreatography, Endoscopic Retrograde/methods , Constriction, Pathologic , Equipment Design , Female , Humans , Male , Metals , Middle Aged , Predictive Value of Tests , Reproducibility of Results , Specimen Handling/adverse effects , Specimen Handling/methods
12.
Dermatol Surg ; 45(4): 514-518, 2019 04.
Article in English | MEDLINE | ID: mdl-30550521

ABSTRACT

BACKGROUND: There are little data regarding error within the multistep process of Mohs micrographic surgery (MMS). OBJECTIVE: A survey of Mohs surgeons was performed to evaluate variation in tissue handling and processing within the MMS process. METHODS AND MATERIALS: A 9-question electronic survey was distributed to members of the American College of Mohs Micrographic Surgery. A total of 97 responses were analyzed. RESULTS: Most surgeons personally transport the tissue (71.1%), most frequently in a specimen container (54.6%). Method of tissue identification during transportation varied significantly. Most surgeons personally hand-draw the map (77.1%). A diagram was most commonly used to convey tissue orientation to the histotechnician (65.4%). Only 31.3% of histotechnicians used labeling of blocks to identify tissue within the cryostat. Most respondents (72.2%) are the only surgeon processing tissue in the laboratory at one time; however, 28.9% reported performing 10 or more cases per day. CONCLUSION: Most respondents are responsible for tissue transport and mapping, which likely reduces potential error. However, the method of transport and labeling, as well as identification by the histotechnician, was more variable. Ultimately, having a consistent process and clear communication with personnel will help reduce potential error during Mohs surgery.


Subject(s)
Mohs Surgery/methods , Skin Neoplasms/surgery , Specimen Handling/methods , Health Care Surveys , Humans , Medical Errors , Mohs Surgery/adverse effects , Specimen Handling/adverse effects
13.
Cell Tissue Bank ; 20(3): 379-387, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31240495

ABSTRACT

To evaluate the characteristics of microbiological contamination in donor corneas preserved for medium-term. A total of 82 donated corneas from June 1, 2014 to November 30, 2014 were retrospectively analyzed. The corneas were preserved in cornea chambers medium-term solution at 4-8 °C for keratoplasty. After removal of the central corneas for transplantation, the corneoscleral rims were put back into the medium for 1 month at room temperature (20-25 °C). The suspicious contaminated storage solutions indicated with transparency or color change were examined with bacteria and fungi cultivation for strain identification. The data collected included gender, age, procurement site and causes of death of donors, and follow-up of recipients. Statistical analysis was performed using Microsoft Excel and SPSS 24.0. Significance level was set at a P value < 0.05. The overall pathogen positive rate was 9.8% (n = 8), including 7 (87.5%) fungi and 1 (12.5%) bacteria. They were 2 (2.44%) Fusarium, 2 (2.44%) Chromomycosis, 1 (1.22%) Candida albicans, 1 (1.22%) Aspergillus versicolor, 1 (1.22%) Acremonium species, and 1 (1.22%) Enterococcus. 5 contaminated corneas were used for penetrating keratoplasty; although four out of five (80%) had not been given antifungal drugs during more than 6 months following-up period, none of the recipients was infected with a graft. Donor age (P = 0.839), gender (P = 0.062), procurement sites (P = 0.713) and cause of death (P = 0.711) had no statistically significant influence on the contamination rate. All donor corneas have a possibility of microbiological contamination. Strict tissue preservation protocol but not antifungal drugs following keratoplasty seems necessary to prevent graft infection.


Subject(s)
Cornea/microbiology , Corneal Transplantation/methods , Organ Preservation/adverse effects , Organ Preservation/methods , Specimen Handling/adverse effects , Adolescent , Adult , Aged , Aged, 80 and over , Bacteria , Child , Child, Preschool , Culture Media , Eye Banks , Female , Fungi , Humans , Infant , Male , Middle Aged , Retrospective Studies , Tissue Donors , Tissue Preservation/methods , Young Adult
14.
J Mol Cell Cardiol ; 122: 11-22, 2018 09.
Article in English | MEDLINE | ID: mdl-30048711

ABSTRACT

Despite advancements in symptom management for heart failure (HF), this devastating clinical syndrome remains the leading cause of death in the developed world. Studies using animal models have greatly advanced our understanding of the molecular mechanisms underlying HF; however, differences in cardiac physiology and the manifestation of HF between animals, particularly rodents, and humans necessitates the direct interrogation of human heart tissue samples. Nevertheless, an ever-present concern when examining human heart tissue samples is the potential for artefactual changes related to temperature changes during tissue shipment or sample processing. Herein, we examined the effects of temperature on the post-translational modifications (PTMs) of sarcomeric proteins, the proteins responsible for muscle contraction, under conditions mimicking those that might occur during tissue shipment or sample processing. Using a powerful top-down proteomics method, we found that sarcomeric protein PTMs were differentially affected by temperature. Specifically, cardiac troponin I and enigma homolog isoform 2 showed robust increases in phosphorylation when tissue was incubated at either 4 °C or 22 °C. The observed increase is likely due to increased cyclic AMP levels and activation of protein kinase A in the tissue. On the contrary, cardiac troponin T and myosin regulatory light chain phosphorylation decreased when tissue was incubated at 4 °C or 22 °C. Furthermore, significant protein degradation was also observed after incubation at 4 °C or 22 °C. Overall, these results indicate that temperature exerts various effects on sarcomeric protein PTMs and careful tissue handling is critical for studies involving human heart samples. Moreover, these findings highlight the power of top-down proteomics for examining the integrity of cardiac tissue samples.


Subject(s)
Myocardium/metabolism , Protein Processing, Post-Translational , Proteomics/methods , Sarcomeres/metabolism , Temperature , Adaptor Proteins, Signal Transducing , Analysis of Variance , Chromatography, Reverse-Phase , Cyclic AMP/analysis , Cyclic AMP-Dependent Protein Kinases/metabolism , Heart Failure/metabolism , Humans , LIM Domain Proteins , Myosin Light Chains/metabolism , Phosphorylation , Protein Isoforms/metabolism , Proteolysis , Specimen Handling/adverse effects , Tandem Mass Spectrometry , Troponin I/metabolism , Troponin T/metabolism
15.
Clin Infect Dis ; 64(suppl_3): S301-S308, 2017 Jun 15.
Article in English | MEDLINE | ID: mdl-28575356

ABSTRACT

BACKGROUND.: Induced sputum (IS) may provide diagnostic information about the etiology of pneumonia. The safety of this procedure across a heterogeneous population with severe pneumonia in low- and middle-income countries has not been described. METHODS.: IS specimens were obtained as part a 7-country study of the etiology of severe and very severe pneumonia in hospitalized children <5 years of age. Rigorous clinical monitoring was done before, during, and after the procedure to record oxygen requirement, oxygen saturation, respiratory rate, consciousness level, and other evidence of clinical deterioration. Criteria for IS contraindications were predefined and serious adverse events (SAEs) were reported to ethics committees and a central safety monitor. RESULTS.: A total of 4653 IS procedures were done among 3802 children. Thirteen SAEs were reported in relation to collection of IS, or 0.34% of children with at least 1 IS specimen collected (95% confidence interval, 0.15%-0.53%). A drop in oxygen saturation that required supplemental oxygen was the most common SAE. One child died after feeding was reinitiated 2 hours after undergoing sputum induction; this death was categorized as "possibly related" to the procedure. CONCLUSIONS.: The overall frequency of SAEs was very low, and the nature of most SAEs was manageable, demonstrating a low-risk safety profile for IS collection even among severely ill children in low-income-country settings. Healthcare providers should monitor oxygen saturation and requirements during and after IS collection, and assess patients prior to reinitiating feeding after the IS procedure, to ensure patient safety.


Subject(s)
Pneumonia/diagnosis , Pneumonia/etiology , Specimen Handling/adverse effects , Sputum , Bacteria/isolation & purification , Child, Preschool , Female , Humans , Infant , Male , Oxygen , Poverty , Specimen Handling/methods
16.
Microb Pathog ; 105: 231-234, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28242424

ABSTRACT

Immunological assays are valuable diagnostic tools to detect infections due to most of bacterial microorganisms. However, the question is how much safe are the common serum samples used as sources of antibodies in these assays? Here, we experimentally followed the issue. 10-fold serial dilutions of two Gram-positive, Staphylococcus aureus and Bacillus cereus, and one Gram-negative bacteria, Escherichia coli, were prepared and spiked into freshly taken blood samples of human and four animal species including sheep, goat, cattle, and horse. After blood clotting, serum samples were examined by colony count method before and after a centrifugation step followed by an observation with a scanning electron microscope. No bacteria grew from both centrifuged and non-centrifuged serum samples contained at least 7.5 × 102, 7.5 × 105, and 7.5 × 105 CFU/ml of S. aureus, B. cereus, and E. coli, respectively. Moreover, routine centrifugation criteria did not show any significant effect on decrease of bacterial cells in sera. The results suggest that we can handle serum samples of apparently healthy humans and animal species without deep concern for possibility of transmission of infectious bacterial agents. However, this supposition should not completely be excluded.


Subject(s)
Bacterial Infections/blood , Bacterial Infections/transmission , Serum/microbiology , Specimen Handling/methods , Animals , Bacillus cereus/growth & development , Bacterial Load , Blood Safety/methods , Blood Safety/standards , Centrifugation , Colony Count, Microbial , Equipment Contamination , Escherichia coli/growth & development , Humans , Specimen Handling/adverse effects , Specimen Handling/standards , Staphylococcus aureus/growth & development
17.
Gynecol Oncol ; 144(2): 324-328, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27912906

ABSTRACT

OBJECTIVE: To explore risk factors associated with sampling failure in women who underwent Pipelle biopsy. METHODS: A consecutive sample of 201 patient records was selected from women who underwent Pipelle biopsy procedures for suspected uterine pathology in a large healthcare system over a 6-month period (January 2013 through June 2013). Personal and medical data including age, BMI, gravidity and parity, and previous history of Pipelle biopsy were abstracted from medical records for each patient. Logistic regression analyses were used to determine factors associated with biopsy sampling failure. RESULTS: Pipelle biopsy sampling failed in 46 out 201 women (22.89%), where 8 (17.39%) were due to inability to access the endometrium, 37 (80.43%) were inadequate samples, and 1 (2.18%) was due to unknown reasons. Personal and medical factors found to be related to sampling failure included: postmenopausal bleeding as biopsy indication (OR 7.41, 95% CI 2.27-24.14); history of prior biopsy failure (OR 23.87, 95% CI 3.76-151.61); and provider type (physician vs. midlevel provider) (OR 9.152, 95% CI 2.49-33.69). CONCLUSION: We identified several risk factors for biopsy failure that suggest the need for particular care with Pipelle sampling procedures among women with certain characteristics, including postmenopausal bleeding and a history of prior failed Pipelle biopsy. Our finding of a significantly higher risk of sampling failure based on personal and clinical data suggests that providers must take into account additional considerations to improve sampling success.


Subject(s)
Biopsy/adverse effects , Endometrium/pathology , Specimen Handling/adverse effects , Adult , Aged , Female , Humans , Logistic Models , Middle Aged , Risk Factors
18.
Eur J Haematol ; 99(4): 357-365, 2017 Oct.
Article in English | MEDLINE | ID: mdl-28719093

ABSTRACT

OBJECTIVES: Bone marrow harvesting is one of the essential sources of stem cells for hematopoietic stem cell transplantation. We describe here the current "up-to-date" standard of the bone marrow harvest in unrelated stem cell donors. METHODS: We analyzed medical data of 187 unrelated hematopoietic stem cell donors who underwent bone marrow harvest without previous peripheral blood stem collection at the center between 2011 and 2015. The methodology of marrow collection includes multiple cells aimed at safety of the procedure, for example, educational movie, modified skin disinfection protocol, cell enumeration during the procedure, reduction of the contamination surfaces, and ongoing monitoring of the quality of work of the doctors. RESULTS: The total nucleated cell count over 2×108 per kg of recipient has been reached in 93.6% of harvests. All of the donors harvested more than 1×108 per kg of the recipient. There were no donors who required transfusions or had serious adverse events during and after the harvest. CONCLUSION: We describe here the current up-to-date standard of bone marrow harvest, which leads to excellent results in majority of donors without causing significant complications during the donation.


Subject(s)
Bone Marrow Cells , Cell Separation/methods , Specimen Handling/methods , Unrelated Donors , Adolescent , Adult , Biomarkers , Bone Marrow Cells/cytology , Bone Marrow Cells/metabolism , Bone Marrow Transplantation , Female , Hematopoietic Stem Cells/cytology , Hematopoietic Stem Cells/metabolism , Humans , Male , Middle Aged , Retrospective Studies , Specimen Handling/adverse effects , Young Adult
19.
Purinergic Signal ; 13(4): 579-590, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28905300

ABSTRACT

Human saphenous vein (HSV) is harvested and prepared prior to implantation as an arterial bypass graft. Injury and the response to injury from surgical harvest and preparation trigger cascades of molecular events and contribute to graft remodeling and intimal hyperplasia. Apoptosis is an early response after implantation that contributes the development of neointimal lesions. Here, we showed that surgical harvest and preparation of HSV leads to vasomotor dysfunction, increased apoptosis and downregulation of the phosphorylation of the anti-apoptotic protein, Niban. A model of subfailure overstretch injury in rat aorta (RA) was used to demonstrate impaired vasomotor function, increased extracellular ATP (eATP) release, and increased apoptosis following pathological vascular injury. The subfailure overstretch injury was associated with activation of p38 MAPK stress pathway and decreases in the phosphorylation of the anti-apoptotic protein Niban. Treatment of RA after overstretch injury with antagonists to purinergic P2X7 receptor (P2X7R) antagonists or P2X7R/pannexin (PanX1) complex, but not PanX1 alone, restored vasomotor function. Inhibitors to P2X7R and PanX1 reduced stretch-induced eATP release. P2X7R/PanX1 antagonism led to decrease in p38 MAPK phosphorylation, restoration of Niban phosphorylation and increases in the phosphorylation of the anti-apoptotic protein Akt in RA and reduced TNFα-stimulated caspase 3/7 activity in cultured rat vascular smooth muscle cells. In conclusion, inhibition of P2X7R after overstretch injury restored vasomotor function and inhibited apoptosis. Treatment with P2X7R/PanX1 complex inhibitors after harvest and preparation injury of blood vessels used for bypass conduits may prevent the subsequent response to injury that lead to apoptosis and represents a novel therapeutic approach to prevent graft failure.


Subject(s)
Purinergic P2X Receptor Antagonists/pharmacology , Receptors, Purinergic P2X7/metabolism , Saphenous Vein/transplantation , Specimen Handling/adverse effects , Animals , Aorta/drug effects , Aorta/metabolism , Apoptosis/drug effects , Coronary Artery Bypass/methods , Female , Humans , Male , Rats , Rats, Sprague-Dawley , Saphenous Vein/drug effects , Saphenous Vein/metabolism , Specimen Handling/methods
20.
J Clin Lab Anal ; 31(2)2017 Mar.
Article in English | MEDLINE | ID: mdl-27565129

ABSTRACT

INTRODUCTION: The complete blood count (CBC) is a frequently performed laboratory test today. This study evaluated the effects of temperature and sample storage time on parameters of CBC which could produce misleading results of clinical significance. METHODS: In a cross-sectional study, CBC was checked in 102 randomly selected healthy individuals and baseline measurements were analyzed using the Sysmex XS 500i fully automated hematology analyzer. CBC was done on samples up to 48 hr of storage at temperatures of 4 ± 2°C, 23 ± 2°C, and 31 ± 2°C. Values were checked at time intervals of 6, 24, and 48 hr. RESULTS: Among CBC parameters, white blood cell, red blood cell, hemoglobin, mean cell hemoglobin (MCH), neutrophils and lymphocytes were stable at all three temperatures up to 48 hr. Monocytes, eosinophils, MCH concentration, hematocrit (Htc), and red cell distribution width-coefficient of variation showed statistically significant changes at 23 ± 2°C and 31 ± 2°C. A significant decline in platelet count (PLT) and increment in mean platelet volume and basophil count were seen at all study temperatures up to 48 hr. CONCLUSION: This study shows that most parameters of the CBC are unaffected with the studied storage temperature up to 48 hr except for the PLT which should be performed within 6 hr of the post-collection time. To avoid changes in a few parameters such as Htc, it is best to store the sample at 4 ± 2°C if any delay is anticipated.


Subject(s)
Blood Cell Count/methods , Cold Temperature , Specimen Handling/methods , Adult , Basophils/cytology , Cross-Sectional Studies , Eosinophils/cytology , Erythrocytes/cytology , Female , Hematocrit , Hemoglobins/analysis , Humans , Male , Middle Aged , Monocytes/cytology , Neutrophils/cytology , Platelet Count , Reference Values , Reproducibility of Results , Specimen Handling/adverse effects , Young Adult
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