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1.
Sci Rep ; 14(1): 21377, 2024 09 13.
Artículo en Inglés | MEDLINE | ID: mdl-39271747

RESUMEN

Phylogenomic data are revolutionizing the field of insect phylogenetics. One of the most tenable and cost-effective methods of generating phylogenomic data is target enrichment, which has resulted in novel phylogenetic hypotheses and revealed new insights into insect evolution. Orthoptera is the most diverse insect order within polyneoptera and includes many evolutionarily and ecologically interesting species. Still, the order as a whole has lagged behind other major insect orders in terms of transitioning to phylogenomics. In this study, we developed an Orthoptera-specific target enrichment (OR-TE) probe set from 80 transcriptomes across Orthoptera. The probe set targets 1828 loci from genes exhibiting a wide range of evolutionary rates. The utility of this new probe set was validated by generating phylogenomic data from 36 orthopteran species that had not previously been subjected to phylogenomic studies. The OR-TE probe set captured an average of 1037 loci across the tested taxa, resolving relationships across broad phylogenetic scales. Our detailed documentation of the probe design and bioinformatics process is intended to facilitate the widespread adoption of this tool.


Asunto(s)
Ortópteros , Filogenia , Animales , Ortópteros/genética , Ortópteros/clasificación , Transcriptoma/genética , Biología Computacional/métodos , Sondas de ADN/genética , Evolución Molecular
2.
Sci Rep ; 14(1): 390, 2024 01 03.
Artículo en Inglés | MEDLINE | ID: mdl-38172148

RESUMEN

Our world is becoming increasingly urbanized with a growing human population concentrated around cities. The expansion of urban areas has important consequences for biodiversity, yet the abiotic drivers of biodiversity in urban ecosystems have not been well characterized for the most diverse group of animals on the planet, arthropods. Given their great diversity, comparatively small home ranges, and ability to disperse, arthropods make an excellent model for studying which factors can most accurately predict urban biodiversity. We assessed the effects of (i) topography (distance to natural areas and to ocean) (ii) abiotic factors (mean annual temperature and diurnal range), and (iii) anthropogenic drivers (land value and amount of impervious surface) on the occurrence of six arthropod groups represented in Malaise trap collections run by the BioSCAN project across the Greater Los Angeles Area. We found striking heterogeneity in responses to all factors both within and between taxonomic groups. Diurnal temperature range had a consistently negative effect on occupancy but this effect was only significant in Phoridae. Anthropogenic drivers had mixed though mostly insignificant effects, as some groups and species were most diverse in highly urbanized areas, while other groups showed suppressed diversity. Only Phoridae was significantly affected by land value, where most species were more likely to occur in areas with lower land value. Los Angeles can support high regional arthropod diversity, but spatial community composition is highly dependent on the taxonomic group.


Asunto(s)
Artrópodos , Dípteros , Animales , Humanos , Artrópodos/fisiología , Ecosistema , Biodiversidad , Ciudades , Los Angeles
3.
Zootaxa ; 4888(1): zootaxa.4888.1.1, 2020 Nov 30.
Artículo en Inglés | MEDLINE | ID: mdl-33311254

RESUMEN

A key is provided to 16 recognized species groups, plus several species not assigned to species group, of Orasema Cameron (Eucharitidae), a widespread New World genus of myrmicine ant (Formicidae: Myrmicinae) parasitoids ranging from northern Argentina to southern Canada. Eight of the species groups are revised, of which five are newly established; keys are given to the species of each treated group, 22 species are newly described, and detailed life histories of several well-documented species are discussed. Revised are the Orasema coloradensis group (four species: O. coloradensis Wheeler, O. iridescens n. sp., O. scaura n. sp., and O. violacea Ashmead), the Orasema bakeri group (six species: O. bablyi n. sp., O. bakeri Gahan, O. dubitata n. sp., O. polymyrmex n. sp., O. taii Chien Heraty, and O. texana Gahan), the Orasema tolteca group (two species: O. castilloae n. sp. and O. tolteca Mann), the Orasema sixaolae group (newly established, with four species: O. brachycephala n. sp., O. nebula n. sp., O. sixaolae Wheeler Wheeler, and O. tinalandia n. sp.), the Orasema acuminata group (newly established, with two species: O. acuminata n. sp. and O. cerulea n. sp.), the Orasema peraltai group (newly established, with two species: O. chrysozona n. sp. and O. peraltai n. sp.), the Orasema johnsoni group (newly established, with two species: O. johnsoni n. sp. and O. spyrogaster n. sp.), and the Orasema heacoxi group (newly established, with two species: O. heacoxi n. sp. and O. masonicki n. sp.). Newly described or treated species not placed to species group are O. brasiliensis (Bréthes), O. cirrhocnemis n. sp., O. monstrosa n. sp., O. mutata n. sp., O. psarops n. sp., and O. roppai n. sp. Species concepts and relationships are based on morphology and a recently published molecular phylogeny.


Asunto(s)
Hormigas , Himenópteros , Distribución Animal , Animales
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