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1.
Sci Rep ; 10(1): 11255, 2020 07 09.
Artículo en Inglés | MEDLINE | ID: mdl-32647235

RESUMEN

Dating of wood is a major task in historical research, archaeology and paleoclimatology. Currently, the most important dating techniques are dendrochronology and radiocarbon dating. Our approach is based on molecular decay over time under specific preservation conditions. In the models presented here, construction wood, cold soft waterlogged wood and wood from living trees are combined. Under these conditions, molecular decay as a usable clock for dating purposes takes place with comparable speed. Preservation conditions apart from those presented here are not covered by the model and cannot currently be dated with this method. For example, samples preserved in a clay matrix seem not to fit into the model. Other restrictions are discussed in the paper. One model presented covers 7,500 years with a root mean square error (RMSE) of 682 years for a single measurement. Another model reduced to the time period of the last 800 years results in a RMSE of 92 years. As multiple measurements can be performed on a single object, the total error for the whole object will be even lower.

2.
J Cell Biol ; 151(2): 467-78, 2000 Oct 16.
Artículo en Inglés | MEDLINE | ID: mdl-11038191

RESUMEN

The specific localization of L-type Ca(2+) channels in skeletal muscle triads is critical for their normal function in excitation-contraction (EC) coupling. Reconstitution of dysgenic myotubes with the skeletal muscle Ca(2+) channel alpha(1S) subunit restores Ca(2+) currents, EC coupling, and the normal localization of alpha(1S) in the triads. In contrast, expression of the neuronal alpha(1A) subunit gives rise to robust Ca(2+) currents but not to triad localization. To identify regions in the primary structure of alpha(1S) involved in the targeting of the Ca(2+) channel into the triads, chimeras of alpha(1S) and alpha(1A) were constructed, expressed in dysgenic myotubes, and their subcellular distribution was analyzed with double immunofluorescence labeling of the alpha(1S)/alpha(1A) chimeras and the ryanodine receptor. Whereas chimeras containing the COOH terminus of alpha(1A) were not incorporated into triads, chimeras containing the COOH terminus of alpha(1S) were correctly targeted. Mapping of the COOH terminus revealed a triad-targeting signal contained in the 55 amino-acid sequence (1607-1661) proximal to the putative clipping site of alpha(1S). Transferring this triad targeting signal to alpha(1A) was sufficient for targeting and clustering the neuronal isoform into skeletal muscle triads and caused a marked restoration of Ca(2+)-dependent EC coupling.


Asunto(s)
Canales de Calcio Tipo L/metabolismo , Músculo Esquelético/fisiología , Señales de Clasificación de Proteína , Transporte de Proteínas , Potenciales de Acción , Secuencia de Aminoácidos , Calcio/metabolismo , Conductividad Eléctrica , Uniones Intercelulares/metabolismo , Datos de Secuencia Molecular , Técnicas de Placa-Clamp , Isoformas de Proteínas , Subunidades de Proteína , Proteínas Recombinantes de Fusión
3.
Neuron ; 16(1): 207-18, 1996 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-8562085

RESUMEN

L-type Ca2+ channels are characterized by their unique sensitivity to organic Ca2+ channel modulators like the 1,4-dihydropyridines (DHPs). To identify molecular motifs mediating DHP sensitivity, we transferred this sensitivity from L-type Ca2+ channels to the DHP-insensitive class A brain Ca2+ channel, BI-2. Expression of chimeras revealed minimum sequence stretches conferring DHP sensitivity including segments IIIS5, IIIS6, and the connecting linker, as well as the IVS5-IVS6 linker plus segment IVS6. DHP agonist and antagonist effects are determined by different regions within the repeat IV motif. Sequence regions responsible for DHP sensitivity comprise only 9.4% of the overall primary structure of a DHP-sensitive alpha 1A/alpha 1S construct. This chimera fully exhibits the DHP sensitivity of channels formed by L-type alpha 1 subunits. In addition, it displays the electrophysiological properties of alpha 1A, as well as its sensitivity toward the peptide toxins omega-agatoxin IVA and omega-conotoxin MVIIC.


Asunto(s)
Canales de Calcio/química , Canales de Calcio/efectos de los fármacos , Calcio/metabolismo , Dihidropiridinas/farmacología , Proteínas Recombinantes de Fusión/efectos de los fármacos , omega-Conotoxinas , Secuencia de Aminoácidos , Animales , Sitios de Unión , Agonistas de los Canales de Calcio/farmacología , Bloqueadores de los Canales de Calcio/farmacología , Canales de Calcio/genética , Canales de Calcio Tipo L , Carpas , Activación del Canal Iónico/efectos de los fármacos , Isradipino/farmacología , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Péptidos/farmacología , Estructura Terciaria de Proteína , Pirroles/farmacología , Conejos , Proteínas Recombinantes de Fusión/química , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Venenos de Araña/farmacología , omega-Agatoxina IVA
4.
Trends Pharmacol Sci ; 19(3): 108-15, 1998 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-9584627

RESUMEN

At least five different types of voltage-gated Ca2+ channels exist in electrically excitable mammalian cells. Only one type, the family of L-type Ca2+ channels (L channels), contains high-affinity binding domains within their alpha 1-subunits for different chemical classes of drugs (Ca2+ channel antagonists; exemplified by isradipine, verapamil and diltiazem). Their stereoselective, high-affinity binding induces block of channel-mediated Ca2+ inward currents in heart and smooth muscle, resulting in antihypertensive, cardiodepressive and antiarrhythmic effects. Amino acids involved in drug binding have recently been identified using photoaffinity labelling, chimeric alpha 1-subunits and site-directed mutagenesis. Insertion of the drug-binding amino acids enabled the transfer of drug-sensitivity into Ca2+ channels that are insensitive to Ca2+ channel antagonists ('gain-of-function' approach). In this review, Jörg Striessing and colleagues summarize the present knowledge about the molecular architecture of L channel drug-binding domains and the implications for Ca2+ channel pharmacology and drug development.


Asunto(s)
Bloqueadores de los Canales de Calcio/metabolismo , Canales de Calcio/metabolismo , Animales , Canales de Calcio/química , Humanos , Conformación Proteica
5.
J Gen Physiol ; 118(5): 495-508, 2001 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-11696608

RESUMEN

A defining property of L-type Ca(2+) channels is their potentiation by both 1,4-dihydropyridine agonists and strong depolarization. In contrast, non-L-type channels are potentiated by neither agonist nor depolarization, suggesting that these two processes may by linked. In this study, we have tested whether the mechanisms of agonist- and depolarization-induced potentiation in the cardiac L-type channel (alpha(1C)) are linked. We found that the mutant L-type channel GFP-alpha(1C)(TQ-->YM), bearing the mutations T1066Y and Q1070M, was able to undergo depolarization-induced potentiation but not potentiation by agonist. Conversely, the chimeric channel GFP-CACC was potentiated by agonist but not by strong depolarization. These data indicate that the mechanisms of agonist- and depolarization-induced potentiation of alpha(1C) are distinct. Since neither GFP-CACC nor GFP-CCAA was potentiated significantly by depolarization, no single repeat of alpha(1C) appears to be responsible for depolarization-induced potentiation. Surprisingly, GFP-CACC displayed a low estimated open probability similar to that of the alpha(1C), but could not support depolarization-induced potentiation, demonstrating that a relatively low open probability alone is not sufficient for depolarization-induced potentiation to occur. Thus, depolarization-induced potentiation may be a global channel property requiring participation from all four homologous repeats.


Asunto(s)
Bloqueadores de los Canales de Calcio/farmacología , Canales de Calcio Tipo L/fisiología , Dihidropiridinas/farmacología , Corazón/fisiología , Potenciales de Acción , Animales , Electrofisiología , Potenciales de la Membrana , Ratones , Mutagénesis Sitio-Dirigida , Mutación Puntual , Reacción en Cadena de la Polimerasa
6.
FEBS Lett ; 474(1): 93-8, 2000 May 26.
Artículo en Inglés | MEDLINE | ID: mdl-10828458

RESUMEN

A full-length and a C-terminally truncated form of the calcium channel alpha(1S) subunit can be isolated from skeletal muscle. Here we studied whether full-length alpha(1S) is functionally incorporated into the skeletal muscle excitation-contraction coupling apparatus. A fusion protein of alpha(1S) with the green fluorescent protein attached to its C-terminus (alpha(1S)-GFP) or alpha(1S) and GFP separately (alpha(1S)+GFP) were expressed in dysgenic myotubes, which lack endogenous alpha(1S). Full-length alpha(1S)-GFP was targeted into triad junctions and restored calcium currents and excitation-contraction coupling. GFP remained colocalized with alpha(1S), indicating that intact alpha(1S)-GFP was inserted into triads and that the C-terminus remained associated with the excitation-contraction coupling apparatus.


Asunto(s)
Canales de Calcio Tipo L/genética , Expresión Génica , Músculo Esquelético/metabolismo , Transfección , Canales de Calcio Tipo L/deficiencia , Canales de Calcio Tipo L/fisiología , Línea Celular , Membrana Celular/metabolismo , Conductividad Eléctrica , Estimulación Eléctrica , Proteínas Fluorescentes Verdes , Proteínas Luminiscentes/genética , Microtúbulos/metabolismo , Contracción Muscular , Proteínas Recombinantes de Fusión , Retículo Sarcoplasmático/metabolismo
7.
FEBS Lett ; 352(2): 141-5, 1994 Sep 26.
Artículo en Inglés | MEDLINE | ID: mdl-7925963

RESUMEN

A Ca2+ channel alpha 1-subunit derived from rabbit heart was transiently expressed in COS-7 cells. The dihydropyridine (+)-isradipine had low affinity (Ki = 34.3 nM) for the alpha 1-subunit in the absence of the beta-subunit due to rapid dissociation (k-1 = 0.11 min-1). Co-expression of the beta-subunit resulted in a > 35-fold increase in (+)-isradipine binding affinity (Ki = 0.9 nM) due to decreased dissociation (k-1 of 0.007 min-1). Higher DHP binding affinity was associated with an increase of the apparent affinity of Ca2+ ions for the channel. Our data suggest that the beta-subunit affects the coordination of Ca2+ ions with sites that are coupled to the dihydropyridine binding domain and by this mechanism increases the affinity for these ligands.


Asunto(s)
Canales de Calcio/metabolismo , Calcio/metabolismo , Dihidropiridinas/metabolismo , Animales , Sitios de Unión , Canales de Calcio/química , Canales de Calcio/genética , Línea Celular , ADN Complementario , Expresión Génica , Cinética , Miocardio/metabolismo , Transfección
8.
FEBS Lett ; 212(2): 247-53, 1987 Feb 23.
Artículo en Inglés | MEDLINE | ID: mdl-2434359

RESUMEN

The tritiated arylazido phenylalkylamine (-)-5-[(3-azidophenethyl)[N-methyl-3H]methylamino]-2-(3,4, 5-trimethoxyphenyl)-2-isopropylvaleronitrile was synthesized and used to photoaffinity label the phenylalkylamine receptor of the membrane-bound and purified calcium channel from guinea-pig skeletal muscle transverse-tubule membranes. The photoaffinity ligand binds reversibly to partially purified membranes with a Kd of 2.0 +/- 0.5 nM and a Bmax of 17.0 +/- 0.9 pmol/mg protein. Binding is stereospecifically regulated by all three classes of organic calcium channel drugs. A 155 kDa band was specifically photolabelled in transverse-tubule particulate and purified calcium channel preparations after ultraviolet irradiation. Additional minor labelled polypeptides (92, 60 and 33 kDa) were only observed in membranes. The heterogeneous 155 kDa region of the purified channel was resolved into two distinct silver-stained polypeptides after reduction (i.e. 155 and 135 kDa). Only the 155 kDa polypeptide carries the photoaffinity label and it is concluded that the 135 kDa polypeptide (which migrates as a 165 kDa band under alkylating conditions) is not a high-affinity drug receptor carrying subunit of the skeletal muscle transverse-tubule L-type calcium channel.


Asunto(s)
Marcadores de Afinidad/metabolismo , Azidas/metabolismo , Canales Iónicos/metabolismo , Músculos/metabolismo , Receptores Nicotínicos/metabolismo , Verapamilo/análogos & derivados , Animales , Azidas/síntesis química , Canales de Calcio , Cobayas , Cinética , Peso Molecular , Receptores Nicotínicos/aislamiento & purificación , Verapamilo/síntesis química , Verapamilo/metabolismo
9.
FEBS Lett ; 339(1-2): 189-94, 1994 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-8313972

RESUMEN

The complete amino acid sequence of an invertebrate calcium channel alpha 1-subunit from housefly (Musca domestica) larvae (designated Mdl alpha 1) has been deduced by cDNA cloning and sequence analysis. Mdl alpha 1 shares higher percent sequence identity with 1,4-dihydropyridine (DHP)-sensitive L-type than with DHP-insensitive calcium channels. As shown by whole mount in situ hybridization and immunostaining Mdl alpha 1 is predominantly expressed in the larval body wall musculature.


Asunto(s)
Canales de Calcio/genética , Clonación Molecular , Moscas Domésticas/química , Secuencia de Aminoácidos , Animales , ADN Complementario/química , ADN Complementario/genética , Dihidropiridinas/farmacología , Expresión Génica , Moscas Domésticas/genética , Hibridación in Situ , Larva/metabolismo , Datos de Secuencia Molecular , Músculos/metabolismo , ARN Mensajero/análisis , ARN Mensajero/metabolismo , Análisis de Secuencia , Homología de Secuencia , Distribución Tisular
10.
Br J Pharmacol ; 118(3): 748-54, 1996 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-8762103

RESUMEN

1. We have identified endogenous calcium channel currents in HEK293 cells. Whole cell endogenous currents (ISr-HEK) were studied in single HEK293 cells with 10 mM strontium as the charge carrier by the patch clamp technique. The kinetic properties and pharmacological features of ISr-HEK were characterized and compared with the properties of a heterologously expressed chimeric L-type calcium channel construct. 2. ISr-HEK activated on depolarization to voltages positive of -40 mV. It had transient current kinetics with a time to peak of 16 +/- 1.4 ms (n = 7) and an inactivation times constant of 52 +/- 5 ms (n = 7) at a test potential of 0 mV. The voltage for half maximal activation was -19.0 +/- 1.5 mV (n = 7) and the voltage for half maximal steady-state inactivation was -39.7 +/- 2.3 mV (n = 7). 3. Block of ISr-HEK by the dihydropyridine isradipine was not stereoselective; 1 microM (+) and (-)-isradipine inhibited the current by 30 +/- 4% (n = 3) and 29 +/- 2% (n = 4) respectively. (+)-Isradipine and (-)-isradipine (10 microM) inhibited ISr-HEK by 89 +/- 4% (n = 5) and 88 +/- 8% (n = 3) respectively. The 7-bromo substituted (+/-)-isradipine (VO2605, 10 microM) which is almost inactive on L-type calcium channels also inhibited ISr-HEK (83 +/- 9%, n = 3) as was observed for 10 microM (-)-nimodipine (78 +/- 6%, n = 5). Interestingly, 10 microM (+/-)-Bay K 8644 (n = 5) had no effect on the current. ISr-HEK was only slightly inhibited by the cone snail toxins omega-CTx GVIA (1 microM, inhibition by 17 +/- 3%, n = 4) and omega-CTx MVIIC (1 microM, inhibition by 20 +/- 3%, n = 4). The funnel web spider toxin omega-Aga IVA (200 nM) inhibited ISr-HEK by 19 +/- 2%, n = 4). 4. In cells expressing ISr-HEK, maximum inward current densities of 0.24 +/- 0.03 pA/pF and 0.39 +/- 0.7 pA/ pF (at a test potential of -10 mV) were estimated in two different batches of HEK293 cells. The current density increased to 0.88 +/- 0.18 pA/pF or 1.11 +/- 0.2 pA/pF respectively, if the cells were cultured for 4 days in serum-free medium. 5. Co-expression of a chimeric L-type calcium channel construct revealed that ISr-HEK and L-type calcium channel currents could be distinguished by their different voltage-dependencies and current kinetics. The current density after heterologous expression of the L-type alpha 1 subunit chimera was estimated to be about ten times higher in serum containing medium (2.14 +/- 0.45 pA/pF) than that of ISr-HEK under the same conditions.


Asunto(s)
Canales de Calcio/fisiología , Riñón/fisiología , Potenciales de la Membrana/fisiología , Células Cultivadas/fisiología , Humanos , Técnicas de Placa-Clamp
11.
Naunyn Schmiedebergs Arch Pharmacol ; 337(3): 331-40, 1988 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-2839780

RESUMEN

The pharmacological and binding properties of the novel enantiomerically pure benzothiazinone (R)-(+)-3,4-dihydro-2-isopropyl-4-methyl-2-[2-[4-[4-[2-(3,4,5-tri- methoxyphenyl)-ethyl]-piperazinyl]-butoxyl-phenyl]-2H-1,4- benzothiazine-3-one dihydrochloride (HOE 166), are described. HOE 166 stereoselectively inhibited KCl-but not noradrenaline-induced contractions of guinea-pig pulmonary arteries, rabbit aorta, rat mesenteric artery preparations and k-strophantin-induced enhancement of guinea-pig papillary muscle contraction in a dose-dependent manner. KCl-induced smooth muscle contraction was inhibited by HOE 166 with IC50-values of approximately 70 nM (5-11 times less potent than nifedipine, 2-16 times more potent than verapamil), the respective S-(-)-enantiomer being approximately 10-fold less potent. HOE 166 decreased the upstroke velocity of the slow action potential in partially depolarized guinea-pig papillary muscle at similar concentrations than nifedipine. To investigate possible interactions with the calcium channel, HOE 166 and its S-(-)-enantiomer were characterized by radioligand binding studies in heart, brain and skeletal muscle transverse-tubule membranes. HOE 166 was a 4-15 times more potent inhibitor of reversible (+)-[3H]PN200-110, (-)-[3H]desmethoxyverapamil and d-cis [3H]diltiazem binding compared to its pharmacologically less active (S)-(-)-enantiomer, with IC50 values in the low nanomolar range. Extensive equilibrium and kinetic studies suggest that HOE 166 exerts its Ca2+-antagonistic effect by binding to a Ca2+-channel-associated drug receptor which is distinct from the 1,4-dihydropyridine, phenylalkylamine or benzothiazepine-selective domain. This HOE 166-selective site is, however, allosterically linked to the other sites of the Ca2+ antagonist receptor complex. We conclude that HOE 166 is a novel calcium antagonist.


Asunto(s)
Bloqueadores de los Canales de Calcio/metabolismo , Piperidinas/metabolismo , Receptores Nicotínicos/metabolismo , Tiazinas/metabolismo , Potenciales de Acción/efectos de los fármacos , Animales , Unión Competitiva/efectos de los fármacos , Canales de Calcio , Cobayas , Corazón/efectos de los fármacos , Hipocampo/efectos de los fármacos , Hipocampo/metabolismo , Técnicas In Vitro , Isradipino , Contracción Muscular/efectos de los fármacos , Músculo Liso/efectos de los fármacos , Músculos/efectos de los fármacos , Músculos/metabolismo , Contracción Miocárdica/efectos de los fármacos , Miocardio/metabolismo , Oxadiazoles/metabolismo , Músculos Papilares/efectos de los fármacos , Conejos , Circulación Esplácnica/efectos de los fármacos , Estrofantinas/farmacología
12.
J Anim Sci ; 91(6): 2680-92, 2013 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-23482575

RESUMEN

Inadequate maternal nutrition during gestation may cause an adverse environment for the fetus leading to alterations of the hypothalamic-pituitary-adrenal (HPA) and sympatho-adrenomedullary (SAM) systems later in life. In the present study, we investigated the effects of diets with low and high protein:carbohydrate ratios on cortisol concentrations of pregnant gilts as well as the long-term effects on the function of the HPA and SAM axes in their offspring. Throughout gestation, 33 German Landrace gilts were fed high (HP, 30%), low (LP, 6.5%), or adequate (AP, 12.1%) protein diets, which were made isocaloric by adjusting the carbohydrate content. The salivary cortisol concentrations of the sows were measured in the course of the gestation period. The offspring were cross-fostered, and the plasma cortisol and catecholamine concentrations of the offspring were determined on postnatal d (PND) 1 and 27 and under specific challenging conditions: after weaning (PND 29) and after ACTH and insulin challenges (PND 68 and 70, respectively). Glucocorticoid receptor (GR) binding and neurotransmitter concentrations were measured in stress-related brain regions, and histological analyses of the adrenal were performed. Maternal salivary cortisol concentrations increased throughout gestation (P < 0.001) and the LP gilts had greater salivary cortisol compared with the AP and HP gilts (P < 0.05). No differences between diets were found for cortisol, corticosteroid-binding globulin, and catecholamine concentrations in plasma and for GR binding in hippocampus and hypothalamus in piglets at PND 1 and 27. However, the cortisol response to weaning was increased in LP piglets (P < 0.05), and in HP offspring the basal plasma noradrenaline concentrations were increased (P < 0.05). The cortisol response to the ACTH and the insulin challenge did not differ between diets. On PND 81, an increased adrenal medulla area was observed in LP offspring compared with the AP offspring (P < 0.05). Our results show that maternal diets with aberrant protein:carbohydrate ratios during gestation have moderate long-term effects on the function of the HPA and SAM system in the offspring, which indicates that pigs show a considerable plasticity to cope with maternal malnutrition.


Asunto(s)
Médula Suprarrenal/efectos de los fármacos , Carbohidratos de la Dieta/administración & dosificación , Proteínas en la Dieta/administración & dosificación , Hidrocortisona/metabolismo , Sistema Hipotálamo-Hipofisario/efectos de los fármacos , Sistema Hipófiso-Suprarrenal/efectos de los fármacos , Sus scrofa/fisiología , Médula Suprarrenal/fisiología , Alimentación Animal/análisis , Animales , Catecolaminas/sangre , Relación Dosis-Respuesta a Droga , Femenino , Glucocorticoides/metabolismo , Hidrocortisona/sangre , Sistema Hipotálamo-Hipofisario/fisiología , Masculino , Neurotransmisores/metabolismo , Paridad , Sistema Hipófiso-Suprarrenal/fisiología , Embarazo , Estrés Fisiológico
14.
Osteoarthritis Cartilage ; 15(2): 205-11, 2007 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-16949841

RESUMEN

OBJECTIVE: To describe the topography and to measure thicknesses, surface areas and volumes in the cartilage layers of the ankle. METHODS: Twelve cadaveric ankle joints were disarticulated and the cartilage surfaces of each bone were imaged with a highly accurate (+/-2 microm) stereophotography system (ATOS). The cartilage was then dissolved and the subchondral bone imaged. The geometric data were then used to measure the quantitative parameters in each cartilage layer. RESULTS: The mean cartilage volume across the 12 specimens ranged from 0.32+/-0.08 ml for the fibula to 2.44+/-0.48 ml for the talus. The mean thickness of both the talar (1.1+/-0.18 mm) and tibial (1.16+/-0.14 mm) cartilage was significantly thicker than the fibula (0.85+/-0.13 mm). The talus had the greatest mean maximum cartilage thickness (2.38+/-0.4 mm). CONCLUSIONS: The reported stereophotographic technique may be used as an independent gold standard for validation of the accuracy of quantitative cartilage measurements made using magnetic resonance imaging. The thickness distribution maps show that the thickest articular cartilage occurs over the talar shoulders where osteochondral lesions commonly occur and not in the centre of the talar dome as commonly believed.


Asunto(s)
Articulación del Tobillo/patología , Cartílago Articular/patología , Imagenología Tridimensional , Fotograbar/métodos , Anciano , Articulación del Tobillo/anatomía & histología , Cartílago Articular/anatomía & histología , Humanos , Masculino , Persona de Mediana Edad , Osteoartritis
15.
Comput Appl Biosci ; 7(3): 317-9, 1991 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-1913212

RESUMEN

The computer program HOWBIG has been developed based on the reciprocal correlation of size to migration distance of DNA in high voltage gradient gel systems (Southern, 1979). For calculation the program automatically chooses three marker bands migrating closest to the calculated band, reducing the error down to approximately 0.5% or less (reciprocal method, local form of calculation). The big advantages of the completely menu-driven program are high accuracy, error detectability, speed and ease of data handling. Management of marker-DNA molecular weights, data and analyses as files included in the menu driven program speeds up every-day lab work.


Asunto(s)
ADN/química , Programas Informáticos , Electroforesis en Gel de Agar , Electroforesis en Gel de Poliacrilamida , Microcomputadores , Peso Molecular , Fragmentos de Péptidos/química
16.
Nucleic Acids Res ; 19(24): 6805-9, 1991 Dec 25.
Artículo en Inglés | MEDLINE | ID: mdl-1762910

RESUMEN

The intron 2 of the murine thymidine kinase (TK) gene was observed to contain two DNase hypersensitive site. In vitro footprinting experiments indicated specific binding sites for nuclear proteins which were characterized within the sequence of intron 2. Two GC boxes (binding sites for transcription factor SP1) and two new protein binding regions, one at the promoter proximal end of intron 2, the other one close to the border to exon 3 were found. Oligonucleotides were synthesized comprising the two new binding sites and were shown in gel mobility shift experiments to be capable of forming specific complexes with nuclear proteins. These proteins are present in growing as well as in quiescent cells suggesting that the sites described here do not contribute to growth regulation of TK expression. That they might play a role in upregulation of TK expression is, however, indicated by the results of CAT assays in which inclusion of downstream sequences of the TK gene containing parts or all of intron 2 were found to positively modulate the activity of the TK promoter.


Asunto(s)
Regulación Enzimológica de la Expresión Génica/genética , Secuencias Reguladoras de Ácidos Nucleicos/genética , Timidina Quinasa/genética , Animales , Secuencia de Bases , Sitios de Unión/genética , Línea Celular , Cloranfenicol O-Acetiltransferasa/genética , Cromatina/metabolismo , Clonación Molecular , Desoxirribonucleasas/metabolismo , Intrones/genética , Ratones , Datos de Secuencia Molecular , Secuencias Repetitivas de Ácidos Nucleicos/genética , Transfección/genética
17.
Proc Natl Acad Sci U S A ; 95(4): 1903-8, 1998 Feb 17.
Artículo en Inglés | MEDLINE | ID: mdl-9465115

RESUMEN

Expression of cardiac L-type Ca2+ channels in dysgenic myotubes results in large Ca2+ currents and electrically evoked contractions resulting from Ca2+-entry dependent release of Ca2+ from the sarcoplasmic reticulum. By contrast, expression of either P/Q-type or N-type Ca2+ channels in dysgenic myotubes does not result in electrically evoked contractions despite producing comparably large Ca2+ currents. In this work we examined the possibility that this discrepancy is caused by the preferential distribution of expressed L-type Ca2+ channels in close apposition to sarcoplasmic reticulum Ca2+ release channels. We tagged the N termini of different alpha1 subunits (classes A, B, C, and S) with a modified green fluorescent protein (GFP) and expressed each of the fusion channels in dysgenic myotubes. Each GFP-tagged alpha1 subunit exhibited Ca2+ channel activity that was indistinguishable from its wild-type counterpart. In addition, expression of GFP-alpha1S and GFP-alpha1C in dysgenic myotubes restored skeletal- and cardiac-type excitation-contraction (EC) coupling, respectively, whereas expression of GFP-alpha1A and GFP-alpha1B failed to restore EC coupling of any type. Laser-scanning confocal microscopy revealed a distinct expression pattern for L-type compared with non-L-type channels. After injection of cDNA into a single nucleus, GFP-alpha1S and GFP-alpha1C were present in the plasmalemma as small punctate foci along much of the longitudinal extent of the myotube. In contrast, GFP-alpha1A and GFP-alpha1B were not concentrated into punctate foci and primarily were found adjacent to the injected nucleus. Thus, L-type channels possess a targeting signal that directs their longitudinal transport and insertion into punctate regions of myotubes that presumably represent functional sites of EC coupling.


Asunto(s)
Canales de Calcio/metabolismo , Proteínas Luminiscentes , Músculos/metabolismo , Animales , Calcio/metabolismo , Canales de Calcio/química , Canales de Calcio Tipo L , Compartimento Celular , Membrana Celular/metabolismo , Células Cultivadas , Proteínas Fluorescentes Verdes , Activación del Canal Iónico , Ratones , Microscopía Confocal , Contracción Muscular , Músculos/ultraestructura , Miocardio/metabolismo , Neuronas/metabolismo , Proteínas Recombinantes de Fusión
18.
Biochemistry ; 34(29): 9350-5, 1995 Jul 25.
Artículo en Inglés | MEDLINE | ID: mdl-7626604

RESUMEN

The molecular determinants for Ca2+ modulation of dihydropyridine (DHP) binding to cardiac Ca2+ channels were identified by mutational neutralization of the glutamate residues that comprise the Ca2+ channel selectivity filter. The binding activity of the DHP (+)-[3H]isradipine, monitored after expression of wild-type and mutant alpha 1 subunits in COS-7 cells, was markedly reduced in four single mutants and a double mutant. Evidence for decreased Ca2+ affinity was obtained for two single mutants in kinetic and equilibrium binding studies. Mutational destabilization of Ca2+ binding resulted in a concomitant decrease of (+)-[3H]isradipine binding affinity. Recovery of (+)-[3H]isradipine binding activity by the allosteric modulator (+)-tetrandrine in two single mutants was associated with a recovery of Ca2+ and DHP binding kinetics to wild-type values. Our findings demonstrate that high-affinity DHP binding is dependent on Ca2+ coordination by glutamate residues which form the selectivity filter of the channel pore.


Asunto(s)
Bencilisoquinolinas , Canales de Calcio/química , Canales de Calcio/metabolismo , Dihidropiridinas/metabolismo , Miocardio/metabolismo , Estructura Secundaria de Proteína , Alcaloides/farmacología , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Sitios de Unión , Bloqueadores de los Canales de Calcio/farmacología , Canales de Calcio/efectos de los fármacos , Carpas , Línea Celular , Membrana Celular/efectos de los fármacos , Membrana Celular/fisiología , Membrana Celular/ultraestructura , Chlorocebus aethiops , Cartilla de ADN , Femenino , Riñón , Cinética , Sustancias Macromoleculares , Potenciales de la Membrana , Modelos Estructurales , Datos de Secuencia Molecular , Músculo Esquelético/metabolismo , Mutagénesis Sitio-Dirigida , Oocitos/fisiología , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Transfección , Xenopus laevis/metabolismo
19.
J Physiol ; 486 ( Pt 1): 131-7, 1995 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-7562629

RESUMEN

1. Chimeric alpha 1 subunits consisting of repeat I and II from the rabbit cardiac (alpha 1C-a) and repeat III and IV from the carp skeletal muscle Ca2+ channel (alpha 1S) were constructed and expressed in Xenopus laevis oocytes without co-expressing other channel subunits. Ba2+-current kinetics of five chimeric channel constructs were studied in Xenopus oocytes using the two-microelectrode technique. 2. Exchange of repeats III and IV of alpha 1C-a with sequences of alpha 1S results in a significantly slower and biexponential activation (apparent activation time constants tau 1act = 19.8 +/- 1.8 ms and tau 2act = 214 +/- 28.7 ms, n = 7) of expressed Ca2+ channel currents; no current inactivation was observable during an 800 ms test pulse to 0 mV. 3. Activation of a chimera consisting of repeats I, II and IV from the alpha 1C-a subunit and repeat III from alpha 1S was fast and monoexponential (tau 1act = 6.33 +/- 1.7 ms, n = 5) and the current inactivated during a 350 ms test pulse to 0 mV (tau inact = 175 +/- 22 ms, n = 5). The current kinetics of this construct did not significantly differ from kinetics of a construct consisting of repeats I to IV from alpha 1C-a (tau 1act = 6.6 +/- 2.1 ms; tau inact = 198 +/- 14 ms; n = 9).(ABSTRACT TRUNCATED AT 250 WORDS)


Asunto(s)
Canales de Calcio/biosíntesis , Activación del Canal Iónico/fisiología , Oocitos/metabolismo , Proteínas Recombinantes de Fusión/biosíntesis , Secuencias Repetitivas de Ácidos Nucleicos/fisiología , Animales , Bario/metabolismo , Canales de Calcio/metabolismo , ADN Complementario/biosíntesis , Cinética , Conejos , Xenopus laevis
20.
J Biol Chem ; 270(13): 7551-7, 1995 Mar 31.
Artículo en Inglés | MEDLINE | ID: mdl-7706302

RESUMEN

We recently characterized (Moebius, F. F., Burrows, G. G., Striessnig, J., and Glossmann H. (1993) Mol. Pharmacol. 43, 139-144) and purified (Moebius, F. F., Hanner, M., Knaus, H. G., Weber, F., Striessnig, J., and Glossmann, H. (1994) J. Biol. Chem. 269, 29314-29320) a binding protein for the phenylalkylamine Ca2+ antagonist emopamil. The emopamil-binding protein (EBP) acts as a high affinity acceptor for several antiischemic drugs and thus represents a potential common molecular target for antiischemic drug action. Degenerate oligonucleotides were synthesized according to the N-terminal amino acid sequence of purified EBP and used to amplify a guinea pig cDNA with reverse transcriptase-polymerase chain reaction and to clone full-length cDNAs from guinea pig and human liver cDNA libraries. The cDNAs coded for 229 (guinea pig) and 230 (human) amino acid 27-kDa polypeptides without significant sequence homology with any known protein. However, EBP shared structural features with pro- and eukaryotic drug transport proteins. The amino acid identity between human and guinea pig EBP was 73%. Hydrophobicity plots predicted four transmembrane segments. The C terminus contained a lysine-rich consensus sequence for the retrieval of type I integral membrane proteins to the endoplasmic reticulum. The heterologous expression of human and guinea pig EBP in Saccharomyces cerevisiae demonstrated that the expression of EBP alone is sufficient to form high affinity drug- and cation-binding domains identical to the [3H]-emopamil-binding site of guinea pig liver. Northern and Western blot analysis revealed high abundance of EBP in guinea pig epithelial tissues as liver, bowel, adrenal gland, testis, ovary, and uterus and low densities in brain, cerebellum, skeletal muscle, and heart. EBP is suggested to be the first structurally characterized member of a family of high affinity microsomal drug acceptor proteins carrying so called sigma-binding sites.


Asunto(s)
Proteínas Portadoras/biosíntesis , Expresión Génica , Hígado/metabolismo , Esteroide Isomerasas , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Unión Competitiva , Northern Blotting , Bloqueadores de los Canales de Calcio/metabolismo , Bloqueadores de los Canales de Calcio/farmacología , Proteínas Portadoras/química , Proteínas Portadoras/aislamiento & purificación , Clonación Molecular , Cartilla de ADN , Biblioteca de Genes , Cobayas , Humanos , Cinética , Microsomas Hepáticos/metabolismo , Datos de Secuencia Molecular , Especificidad de Órganos , Reacción en Cadena de la Polimerasa , Estructura Secundaria de Proteína , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Saccharomyces cerevisiae , Homología de Secuencia de Aminoácido , Verapamilo/análogos & derivados , Verapamilo/metabolismo
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