Mobility, speciation of cadmium, and bacterial community composition along soil depths during microbial carbonate precipitation under simulated acid rain.

An overexploitation of earth resources results in acid deposition in soil, which adversely impacts soil ecosystems and biodiversity and affects conventional heavy metal remediation using immobilization. A series of column experiments was conducted in this study to compare the cadmium (Cd) retention stability through biotic and abiotic carbonate precipitation impacted by simulated acid rain (SAR), to build a comprehensive understanding of cadmium speciation and distribution along soil depth and to elucidate the biogeochemical bacteria-soil-heavy metal interfaces. The strain of Sporosarcina pasteurii DSM 33 was used to trigger the biotic carbonate precipitation and cultivated throughout the 60-day column incubation. Results of soil pH, electrical conductivity (EC), and quantitative CdCO3/CaCO3 analysis concluded that the combination of biotic and abiotic soil treatment could reinforce soil buffering capacity as a strong defense mechanism against acid rain disturbance. Up to 1.8 ± 0.04 U/mg urease enzyme activity was observed in combination soil from day 10, confirming the sustained effect of urease-mediated microbial carbonate precipitation. Cadmium speciation and distribution analyses provided new insights into the dual stimulation of carbonate-bound and Fe/Mn-bound phases of cadmium immobilization under microbially induced carbonate precipitation (MICP). As confirmed by the microbial community analysis, outsourcing urea triggered diverse microbial metabolic responses, notably carbonate precipitation and dissimilatory iron metabolism, in both oxygen-rich topsoil and oxygen-depleted subsurface layers. The overall investigation suggests the feasibility of applying MICP for soil Cd remediation under harsh environments and stratagem by selecting microbial functionality to overcome environmental challenges.

Pyrogenic Black Carbon Suppresses Microbial Methane Production by Serving as a Terminal Electron Acceptor.

Methane (CH4) is the second most important greenhouse gas, 27 times as potent as CO2 and responsible for >30% of the current anthropogenic warming. Globally, more than half of CH4 is produced microbially through methanogenesis. Pyrogenic black carbon possesses a considerable electron storage capacity (ESC) and can be an electron donor or acceptor for abiotic and microbial redox transformation. Using wood-derived biochar as a model black carbon, we demonstrated that air-oxidized black carbon served as an electron acceptor to support anaerobic oxidation of organic substrates, thereby suppressing CH4 production. Black carbon-respiring bacteria were immediately active and outcompeted methanogens. Significant CH4 did not form until the bioavailable electron-accepting capacity of the biochar was exhausted. An experiment with labeled acetate (13CH3COO-) yielded 1:1 13CH4 and 12CO2 without biochar and predominantly 13CO2 with biochar, indicating that biochar enabled anaerobic acetate oxidation at the expense of methanogenesis. Methanogens were enriched following acetate fermentation but only in the absence of biochar. The electron balance shows that approximately half (∼2.4 mmol/g) of biochar's ESC was utilized by the culture, corresponding to the portion of the ESC > +0.173 V (vs SHE). These results provide a mechanistic basis for quantifying the climate impact of black carbon and developing ESC-based applications to reduce CH4 emissions from biogenic sources.

Ureolytic bacteria from electronic waste area, their biological robustness against potentially toxic elements and underlying mechanisms.

Ureolytic bacteria can be a promising mediator used for the immobilization of potentially toxic elements via microbially-induced carbonate precipitation (MICP) process from biodegradable ions to carbonate form. Electronic waste (E-waste) environment is very complex compared to general metal contaminated soil, however, MICP has not been studied under such an environment. In this study, three bacterial strains were successfully isolated from an E-waste area in Guiyu, China, and indicated to have positive ureolytic behavior with significant heavy metal resistance (specific to Cu and Pb), among which, a strain of Lysinibacillus sp. was proven to show a great persistence in heavy metal immobilization. This featured strain can tolerate up to 100 ppm copper and 1000 ppm lead according to minimal inhibitory concentration (MIC) results, and its urease activity was well-adapted to metal effects. Results also revealed the positive correlation (R2 = 0.9819) between metal concentrations and surface layer protein content present in bacterial cells. The underlying mechanism on the role of S-layer protein in heavy metal immobilization during biocalcification was elucidated. The metabolic system of heavy metal resistance for these E-waste derived isolates is novel and represents a point of interest for possible environmental applications to immobilize toxic heavy metals from electronic waste sites.

Whole cell evaluation and the enzymatic kinetic study of urease from ureolytic bacteria affected by potentially toxic elements.

Microbially induced carbonate precipitation (MICP) is a biomineralization process that has various applications in environmental pollution remediation and restoration of a range of building materials. In this study, a ureolytic bacterium, Lysinibacillus sp. GY3, isolated from an E-waste site, was found as a promising catalyst for remediation of heavy metals via the MICP process. This bacterial isolate produced significant amounts of urease and showed a great persistence in immobilization of potentially toxic elements. A reference ureolytic strain, Bacillus megaterium VS1, was selected in order to compare the efficiency of Lysinibacillus sp. GY3. Study on urease localization indicated 80 % more urease activity secreted extracellularly as for Lysinibacillus sp. GY3 compared to B. megaterium VS1. From the investigation on effects of metals on both intra- and extra-cellular urease, it was clear that Lysinibacillus sp. GY3 produced the most stable urease under conditions of metal pressure, especially retaining more than 70 % activity in the presence of 1 g/L Pb2+ and Zn2+. These results suggest that this isolated microorganism could be promisingly introduced in the MICP process to stabilize complex heavy metal pollutions, with reference to the regulating ability under harsh conditions to stabilize urease activity. This species is so important both for its biological features and environmental impacts. In addition, the present study will bring new insight in the field of metal remediation coupled with enzyme engineered biotechnology.

Biochemical composite material using corncob powder as a carrier material for ureolytic bacteria in soil cadmium immobilization.

Corncob powder possessing its superiority in environmental sustainability and cost, was approved with strong capability of being a replacement of biochar in facilitating the microbial carbonate precipitation process. In this study, the ureolytic bacterial strain Bacillus sp. WA isolated from a pre-acquired metal contaminated soil in Guiyu, China, was showed to be well attached on the surfaces of corncob powder, indicating the carrier's role as a durable shelter for bacterial cells. The efficient immobilization helped develop biochemical composite material (BCM) and proven to function better the calcite precipitation. Afterwards, the mechanism and multi-directional benefits of BCM in edaphic cadmium remediation were examined through pot experiment and compared with corncob powder/bacterial strain/nutrient media as control groups. Integrated lab-scale analyses emphasized the advantages of BCM by the maximum soil urease activity (up to 3.440 U/mg and increased by 214% in 28 days), maximal bacterial propagation (most abundant population in fluorescence microscopy), richest surface functional group (most remarkable OC bond and CO bond in FTIR result), notable calcite precipitation (clear calcite crystals on the surface of BCM compared to control group under SEM-EDS), and highest Cd immobilization rate (exchangeable Cd decreased by 68.54%), among all treatments. The pH and electroconductivity measurements additionally led to the mechanism of corncob powder and NBU promoting pre-existed ureolytic bacteria in soil, which demonstrated the added value of corncob to be fine carbon source and residence shelter for soil microorganism, revealing its potential in developing agricultural materials.

Environmental and health impacts due to e-waste disposal in China - A review.

E-waste is discarded and shipped mostly to developing countries located in Asian continent for disposal from other developed countries. Especially 70% of the world's e-waste ends up in Guiyu, a small town located in Guangdong Province of China. As little as 25% is recycled in formal recycling centers with adequate protection for workers and the other e-waste arrived in those areas is not handled in organized manner. As per reports only roughly 12.5% of e-waste is actually recycled, and the recycling efforts in those regions are primitive and result in toxic substances being leached into the surrounding ecosystems. In addition to persistent organic pollutants, there are many heavy metals found in the ground and river sediments in Guiyu, exceeding the threshold set to protect human health. Those areas are no longer suitable for growing food, and water is unsafe for drinking, due to the amount of toxins leached into the groundwater and land. Hazardous threats to environment and human health due to hazardous substances of e-waste all around China, as well as the current e-waste management were documented in this review. The article concludes with controlled contamination sources, and eco-friendly and efficient remediation technologies to solve e-waste problem in China.

The large-scale process of microbial carbonate precipitation for nickel remediation from an industrial soil.

Microbial carbonate precipitation is known as an efficient process for the remediation of heavy metals from contaminated soils. In the present study, a urease positive bacterial isolate, identified as Bacillus cereus NS4 through 16S rDNA sequencing, was utilized on a large scale to remove nickel from industrial soil contaminated by the battery industry. The soil was highly contaminated with an initial total nickel concentration of approximately 900 mg kg-1. The soluble-exchangeable fraction was reduced to 38 mg kg-1 after treatment. The primary objective of metal stabilization was achieved by reducing the bioavailability through immobilizing the nickel in the urease-driven carbonate precipitation. The nickel removal in the soils contributed to the transformation of nickel from mobile species into stable biominerals identified as calcite, vaterite, aragonite and nickelous carbonate when analyzed under XRD. It was proven that during precipitation of calcite, Ni2+ with an ion radius close to Ca2+ was incorporated into the CaCO3 crystal. The biominerals were also characterized by using SEM-EDS to observe the crystal shape and Raman-FTIR spectroscopy to predict responsible bonding during bioremediation with respect to Ni immobilization. The electronic structure and chemical-state information of the detected elements during MICP bioremediation process was studied by XPS. This is the first study in which microbial carbonate precipitation was used for the large-scale remediation of metal-contaminated industrial soil.