Búsqueda | Biblioteca Virtual en Salud Fronteriza

1.

Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants.

Du, Jiamu; Zhong, Xuehua; Bernatavichute, Yana V; Stroud, Hume; Feng, Suhua; Caro, Elena; Vashisht, Ajay A; Terragni, Jolyon; Chin, Hang Gyeong; Tu, Andy; Hetzel, Jonathan; Wohlschlegel, James A; Pradhan, Sriharsa; Patel, Dinshaw J; Jacobsen, Steven E.

Cell ; 151(1): 167-80, 2012 Sep 28.

Artículo en Inglés | MEDLINE | ID: mdl-23021223

2.

Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution.

Sun, Zhiyi; Vaisvila, Romualdas; Hussong, Laura-Madison; Yan, Bo; Baum, Chloé; Saleh, Lana; Samaranayake, Mala; Guan, Shengxi; Dai, Nan; Corrêa, Ivan R; Pradhan, Sriharsa; Davis, Theodore B; Evans, Thomas C; Ettwiller, Laurence M.

Genome Res ; 31(2): 291-300, 2021 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-33468551

3.

Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA.

Vaisvila, Romualdas; Ponnaluri, V K Chaithanya; Sun, Zhiyi; Langhorst, Bradley W; Saleh, Lana; Guan, Shengxi; Dai, Nan; Campbell, Matthew A; Sexton, Brittany S; Marks, Katherine; Samaranayake, Mala; Samuelson, James C; Church, Heidi E; Tamanaha, Esta; Corrêa, Ivan R; Pradhan, Sriharsa; Dimalanta, Eileen T; Evans, Thomas C; Williams, Louise; Davis, Theodore B.

Genome Res ; 31(7): 1280-1289, 2021 Jul.

Artículo en Inglés | MEDLINE | ID: mdl-34140313

4.

Epigenetic reprogramming enables the transition from primordial germ cell to gonocyte.

Hill, Peter W S; Leitch, Harry G; Requena, Cristina E; Sun, Zhiyi; Amouroux, Rachel; Roman-Trufero, Monica; Borkowska, Malgorzata; Terragni, Jolyon; Vaisvila, Romualdas; Linnett, Sarah; Bagci, Hakan; Dharmalingham, Gopuraja; Haberle, Vanja; Lenhard, Boris; Zheng, Yu; Pradhan, Sriharsa; Hajkova, Petra.

Nature ; 555(7696): 392-396, 2018 03 15.

Artículo en Inglés | MEDLINE | ID: mdl-29513657

5.

Polyglutamylation: biology and analysis.

Ruse, Cristian I; Chin, Hang Gyeong; Pradhan, Sriharsa.

Amino Acids ; 54(4): 529-542, 2022 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-35357568

6.

Protect-seq: genome-wide profiling of nuclease inaccessible domains reveals physical properties of chromatin.

Spracklin, George; Pradhan, Sriharsa.

Nucleic Acids Res ; 48(3): e16, 2020 02 20.

Artículo en Inglés | MEDLINE | ID: mdl-31819993

7.

The microtubule-associated histone methyltransferase SET8, facilitated by transcription factor LSF, methylates α-tubulin.

Chin, Hang Gyeong; Esteve, Pierre-Olivier; Ruse, Cristian; Lee, Jiyoung; Schaus, Scott E; Pradhan, Sriharsa; Hansen, Ulla.

J Biol Chem ; 295(14): 4748-4759, 2020 04 03.

Artículo en Inglés | MEDLINE | ID: mdl-32111740

8.

Mapping of polyglutamylation in tubulins using nanoLC-ESI-MS/MS.

McClung, Colleen; Chin, Hang Gyeong; Hansen, Ulla; Noren, Christopher J; Pradhan, Sriharsa; Ruse, Cristian I.

Anal Biochem ; 612: 113761, 2021 01 01.

Artículo en Inglés | MEDLINE | ID: mdl-32502490

9.

DNMT1-interacting RNAs block gene-specific DNA methylation.

Di Ruscio, Annalisa; Ebralidze, Alexander K; Benoukraf, Touati; Amabile, Giovanni; Goff, Loyal A; Terragni, Jolyon; Figueroa, Maria Eugenia; De Figueiredo Pontes, Lorena Lobo; Alberich-Jorda, Meritxell; Zhang, Pu; Wu, Mengchu; D'Alò, Francesco; Melnick, Ari; Leone, Giuseppe; Ebralidze, Konstantin K; Pradhan, Sriharsa; Rinn, John L; Tenen, Daniel G.

Nature ; 503(7476): 371-6, 2013 Nov 21.

Artículo en Inglés | MEDLINE | ID: mdl-24107992

10.

A novel requirement for DROSHA in maintenance of mammalian CG methylation.

Stathopoulou, Athanasia; Chhetri, Jyoti B; Ambrose, John C; Estève, Pierre-Olivier; Ji, Lexiang; Erdjument-Bromage, Hediye; Zhang, Guoqiang; Neubert, Thomas A; Pradhan, Sriharsa; Herrero, Javier; Schmitz, Robert J; Ooi, Steen K T.

Nucleic Acids Res ; 45(16): 9398-9412, 2017 09 19.

Artículo en Inglés | MEDLINE | ID: mdl-28934503

11.

Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression.

Estève, Pierre-Olivier; Zhang, Guoqiang; Ponnaluri, V K Chaithanya; Deepti, Kanneganti; Chin, Hang Gyeong; Dai, Nan; Sagum, Cari; Black, Karynne; Corrêa, Ivan R; Bedford, Mark T; Cheng, Xiaodong; Pradhan, Sriharsa.

Nucleic Acids Res ; 44(4): 1642-56, 2016 Feb 29.

Artículo en Inglés | MEDLINE | ID: mdl-26553800

12.

Tissue-specific epigenetics in gene neighborhoods: myogenic transcription factor genes.

Chandra, Sruti; Terragni, Jolyon; Zhang, Guoqiang; Pradhan, Sriharsa; Haushka, Stephen; Johnston, Douglas; Baribault, Carl; Lacey, Michelle; Ehrlich, Melanie.

Hum Mol Genet ; 24(16): 4660-73, 2015 Aug 15.

Artículo en Inglés | MEDLINE | ID: mdl-26041816

13.

A refined DNA methylation detection method using MspJI coupled quantitative PCR.

Petell, Christopher J; Loiseau, Gilbert; Gandy, Ryan; Pradhan, Sriharsa; Gowher, Humaira.

Anal Biochem ; 533: 1-9, 2017 09 15.

Artículo en Inglés | MEDLINE | ID: mdl-28624296

14.

Small RNA-mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylation.

Zhang, Guoqiang; Estève, Pierre-Olivier; Chin, Hang Gyeong; Terragni, Jolyon; Dai, Nan; Corrêa, Ivan R; Pradhan, Sriharsa.

Nucleic Acids Res ; 43(12): 6112-24, 2015 Jul 13.

Artículo en Inglés | MEDLINE | ID: mdl-25990724

15.

Mediator links epigenetic silencing of neuronal gene expression with x-linked mental retardation.

Ding, Ning; Zhou, Haiying; Esteve, Pierre-Olivier; Chin, Hang Gyeong; Kim, Seokjoong; Xu, Xuan; Joseph, Sumy M; Friez, Michael J; Schwartz, Charles E; Pradhan, Sriharsa; Boyer, Thomas G.

Mol Cell ; 31(3): 347-59, 2008 Aug 08.

Artículo en Inglés | MEDLINE | ID: mdl-18691967

16.

Methyllysine reader plant homeodomain (PHD) finger protein 20-like 1 (PHF20L1) antagonizes DNA (cytosine-5) methyltransferase 1 (DNMT1) proteasomal degradation.

Estève, Pierre-Olivier; Terragni, Jolyon; Deepti, Kanneganti; Chin, Hang Gyeong; Dai, Nan; Espejo, Alexsandra; Corrêa, Ivan R; Bedford, Mark T; Pradhan, Sriharsa.

J Biol Chem ; 289(12): 8277-87, 2014 Mar 21.

Artículo en Inglés | MEDLINE | ID: mdl-24492612

17.

Antiproliferative small-molecule inhibitors of transcription factor LSF reveal oncogene addiction to LSF in hepatocellular carcinoma.

Grant, Trevor J; Bishop, Joshua A; Christadore, Lisa M; Barot, Girish; Chin, Hang Gyeong; Woodson, Sarah; Kavouris, John; Siddiq, Ayesha; Gredler, Rachel; Shen, Xue-Ning; Sherman, Jennifer; Meehan, Tracy; Fitzgerald, Kevin; Pradhan, Sriharsa; Briggs, Laura A; Andrews, William H; Sarkar, Devanand; Schaus, Scott E; Hansen, Ulla.

Proc Natl Acad Sci U S A ; 109(12): 4503-8, 2012 Mar 20.

Artículo en Inglés | MEDLINE | ID: mdl-22396589

18.

Identification of DNMT1 selective antagonists using a novel scintillation proximity assay.

Kilgore, Jessica A; Du, Xinlin; Melito, Lisa; Wei, Shuguang; Wang, Changguang; Chin, Hang Gyeong; Posner, Bruce; Pradhan, Sriharsa; Ready, Joseph M; Williams, Noelle S.

J Biol Chem ; 288(27): 19673-84, 2013 Jul 05.

Artículo en Inglés | MEDLINE | ID: mdl-23671287

19.

Mammalian epigenetic mechanisms.

Zhang, Guoqiang; Pradhan, Sriharsa.

IUBMB Life ; 66(4): 240-56, 2014 Apr.

Artículo en Inglés | MEDLINE | ID: mdl-24706538

20.

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Cokus, Shawn J; Feng, Suhua; Zhang, Xiaoyu; Chen, Zugen; Merriman, Barry; Haudenschild, Christian D; Pradhan, Sriharsa; Nelson, Stanley F; Pellegrini, Matteo; Jacobsen, Steven E.

Nature ; 452(7184): 215-9, 2008 Mar 13.

Artículo en Inglés | MEDLINE | ID: mdl-18278030

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