Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 1 de 1
Filtrar
Más filtros

Banco de datos
País/Región como asunto
Tipo del documento
Intervalo de año de publicación
1.
Virol J ; 21(1): 153, 2024 Jul 07.
Artículo en Inglés | MEDLINE | ID: mdl-38972989

RESUMEN

Wild waterfowl serve as a reservoir of some astroviruses. Fecal samples from wild waterfowl collected at Hong Kong's Marshes were tested using pan-astrovirus reverse transcription-PCR. Positive samples underwent subsequent host identification using DNA barcoding. Based on deduced partial sequences, noteworthy samples from three astrovirus groups (mammalian, avian and unclassified astroviruses) were further analyzed by next-generation sequencing. One sample of Avastrovirus 4 clade, MP22-196, had a nearly complete genome identified. The results of ORF2 phylogenetic analysis and genetic distance analysis indicate that Avastrovirus 4 is classified as a distinct subclade within Avastrovirus. MP22-196 has typical astrovirus genome characteristics. The unique characteristics and potential differences of this genome, compared to other avian astrovirus sequences, involve the identification of a modified sgRNA sequence situated near the ORF2 start codon, which precedes the ORF1b stop codon. Additionally, the 3' UTR of MP22-196 is shorter than other avian astroviruses. This study expands our understanding of the Avastrovirus 4 clade.


Asunto(s)
Infecciones por Astroviridae , Aves , Heces , Variación Genética , Genoma Viral , Filogenia , Animales , Hong Kong , Aves/virología , Heces/virología , Infecciones por Astroviridae/veterinaria , Infecciones por Astroviridae/virología , Animales Salvajes/virología , Enfermedades de las Aves/virología , Secuenciación de Nucleótidos de Alto Rendimiento , Avastrovirus/genética , Avastrovirus/clasificación , Avastrovirus/aislamiento & purificación , ARN Viral/genética , Sistemas de Lectura Abierta , Astroviridae/genética , Astroviridae/aislamiento & purificación , Astroviridae/clasificación
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA