Augmented reality display with high eyebox uniformity over the full field of view based on a random mask grating.

Ensuring uniform illuminance in waveguide-based augmented reality (AR) display devices is crucial for providing an immersive and comfortable visual experience. However, there is a lack of a straightforward and efficient design method available to achieve illuminance uniformity over the full field of view. To address this issue, we propose a novel design that utilizes random mask gratings (RMGs) as the folding grating and the out-coupling grating. Unlike traditional approaches that modify the grating structure, we control the diffraction efficiency distribution by adjusting the filling factor of the mask while keeping the grating structure unchanged in one RMG. The grating structures are designed and optimized based on rigorous coupled wave analysis and particle swarm optimization. The feasibility of our method is verified by the simulation results in Lighttools. In the FOV range of 20°×15°, the eyebox uniformities of all fields are greater than 0.78, which can provide a good visual experience for users.

Hybrid waveguide based augmented reality display system with extra large field of view and 2D exit pupil expansion.

For a waveguide display device, the field of view (FOV) is a key parameter for evaluating its optical performance. To address this issue, we propose a hybrid waveguide system, which is composed of two projectors, two in-couplers, two half-mirror arrays and an out-coupler. We use two projectors to generate the left and right parts of the output image separately, which can increase the upper limit of the FOV significantly. Unlike conventional waveguide-based system, we use half-mirror arrays instead of folding gratings to realize 2D exit pupil expansion. By doing so, the total internal reflection condition can always be met during the pupil expansion process. To solve the difficulty in designing collimating optical system with large FOV, we propose a method of tilting the projection system. The hybrid waveguide system can realize a FOV of 88°(H) × 53°(V).

Wander and spread of a perfect Laguerre-Gauss beam under turbulent absorbent seawater.

The wander and long-term spread of a beam caused by turbulence are two important factors affecting channel targeting and information receiving in optics communication systems. In this paper, the wander and long-term spread of a perfect Laguerre-Gauss (PLG)/circular perfect Laguerre-Gauss (CPLG) beam in turbulent absorbing seawater are studied. The analytical expression of the wander for a CPLG beam in the weak turbulent fluctuation region and the analytical expression of the long-term spread for a CPLG beam in a weak to strong turbulent fluctuation region are derived by using the Rytov approximation and the generalized Huygens-Fresnel integral, respectively. Through numerical analysis, we find that the optimal beam diameter and self-convergence effect of the PLG beam exist under given communication link conditions, the long-term spread of PLG beam is smaller than that of the LG beam, but the wander evolution trend of the PLG beam with increasing propagation distance is opposite to that of the LG beam. PLG and CPLG beams have stronger resistance disturbance of turbulence than that of Laguerre-Gauss and circular Laguerre-Gauss beams, respectively.

Combination of Structured Illumination Microscopy with Hyperspectral Imaging for Cell Analysis.

Existing structured illumination microscopy (SIM) allows super-resolution live-cell imaging in few color channels that provide merely morphological information but cannot acquire the sample spectrum that is strongly relevant to the underlying physicochemical property. We develop hyperspectral SIM which enables high-speed spectral super-resolution imaging in SIM for the first time. Through optically mapping the three-dimensional (x, y, and λ) datacube of the sample to the detector plane, hyperspectral SIM allows snapshot spectral imaging of the SIM raw image, detecting the sample spectrum while retaining the high-speed and super-resolution characteristics of SIM. We demonstrate hyperspectral SIM imaging and reconstruct a datacube containing 31 super-resolution images of different wavelengths from only 9 exposures, achieving a 15 nm spectral resolution. We show time-lapse hyperspectral SIM imaging that achieves an imaging speed of 2.7 s per datacube-31-fold faster than the existing wavelength scanning strategy. To demonstrate the great prospects for further combining hyperspectral SIM with various spectral analysis methods, we also perform spectral unmixing of the hyperspectral SIM result while imaging the spectrally overlapped sample.

Snapshot spectroscopic microscopy with double spherical slicer mirrors.

Snapshot hyperspectral microscopic imaging can obtain the morphological characteristics and chemical specificity of samples simultaneously and instantaneously. We demonstrate a double-slicer spectroscopic microscopy (DSSM) that uses two spherical slicer mirrors to magnify the target image and slice it. These slits are lined up and dispersed, then mapped onto an area-array detector. An anamorphosis unit optimizes the capacity of the limited pixels. With a single shot and image recombination, a data cube can be constructed for sample analysis, and a model of DSSM is simulated. The system covers the spectral range from 500 nm to 642.5 nm with 20 spectral channels. The spatial resolution is 417 nm, and the spectral resolution is 7.5 nm.

A noncanonical PPARγ/RXRα-binding sequence regulates leptin expression in response to changes in adipose tissue mass.

Leptin expression decreases after fat loss and is increased when obesity develops, and its proper quantitative regulation is essential for the homeostatic control of fat mass. We previously reported that a distant leptin enhancer 1 (LE1), 16 kb upstream from the transcription start site (TSS), confers fat-specific expression in a bacterial artificial chromosome transgenic (BACTG) reporter mouse. However, this and the other elements that we identified do not account for the quantitative changes in leptin expression that accompany alterations of adipose mass. In this report, we used an assay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq) to identify a 17-bp noncanonical peroxisome proliferator-activated receptor gamma (PPARγ)/retinoid X receptor alpha (RXRα)-binding site, leptin regulatory element 1 (LepRE1), within LE1, and show that it is necessary for the fat-regulated quantitative control of reporter (luciferase) expression. While BACTG reporter mice with mutations in this sequence still show fat-specific expression, luciferase is no longer decreased after food restriction and weight loss. Similarly, the increased expression of leptin reporter associated with obesity in ob/ob mice is impaired. A functionally analogous LepRE1 site is also found in a second, redundant DNA regulatory element 13 kb downstream of the TSS. These data uncouple the mechanisms conferring qualitative and quantitative expression of the leptin gene and further suggest that factor(s) that bind to LepRE1 quantitatively control leptin expression and might be components of a lipid-sensing system in adipocytes.

Simultaneous multicolour imaging using quantum dot structured illumination microscopy.

Multicolour structured illumination microscopy (SIM) is a powerful tool used for the investigation of the dynamic interaction between subcellular structures. Nevertheless, most of the multicolour SIM schemes are currently limited by conventional fluorescent dyes and wavelength-dependent optical systems, and can only sequentially record images of different colour channels instead of obtaining multicolour datasets simultaneously. To address these issues, we present a novel multicolour SIM scheme referred to as quantum dot structured illumination microscopy (QD-SIM). QD-SIM enables simultaneously excitation and collection of multicolour fluorescent signals. We also propose a theoretical analysis of the image formation in two-dimensional multicolour SIM to help combine the optically sectioned and super-resolution attributes of SIM. Based on this theory, QD-SIM enables optically sectioned, super-resolution, multicolour simultaneous imaging at a single plane.

Comprehensive genomic variation profiling of cervical intraepithelial neoplasia and cervical cancer identifies potential targets for cervical cancer early warning.

BACKGROUND: To better understand the pathogenesis of cervical cancer (CC), we systematically analysed the genomic variation and human papillomavirus (HPV) integration profiles of cervical intraepithelial neoplasia (CIN) and CC. METHODS: We performed whole-genome sequencing or whole-exome sequencing of 102 tumour-normal pairs and human papillomavirus probe capture sequencing of 45 CCs, 44 CIN samples and 25 normal cervical samples, and constructed strict integrated workflow of genomic analysis. RESULTS: Mutational analysis identified eight significantly mutated genes in CC including four genes (FAT1, MLL3, MLL2 and FADD), which have not previously been reported in CC. Targetable alterations were identified in 55.9% of patients. In addition, HPV integration breakpoints occurred in 97.8% of the CC samples, 70.5% of the CIN samples and 42.8% of the normal cervical samples with HPV infection. Integrations of high-risk HPV strains in CCs, including HPV16, 18, 33 and 58, also occurred in the CIN samples. Moreover, gene mutations were detected in 52% of the CIN specimens, and 54.8% of these mutations occurred in genes that also mutated in CCs. CONCLUSION: Our results lay the foundation for a deep understanding of the molecular mechanisms and finding new diagnostic and therapeutic targets of CC.

Broadband aberration-corrected snapshot spectrometer with a toroidal slicer mirror.

We demonstrate a broadband aberration-corrected snapshot spectrometer by developing a toroidal slicer mirror as the focusing mirror. A collimating slicer mirror and an integrated grating divide the entire wavelength range into several windows. The toroidal sub-mirrors of the focusing mirror compensate for the coma and correct the astigmatism at different windows to compress the spectral spots over the waveband. From 200 to 1000 nm, the RMS spot radii are less than 30 µm and the spectral resolution at 600 nm is 151.8 pm. The optics have a small volume of 11 cm×11 cm×1.5 cm by employing a folded structure.

Simultaneous Temperature and Strain Measurements Using Polarization-Maintaining Few-Mode Bragg Gratings.

Simultaneous measurement of temperature and strain was demonstrated using a polarization-maintaining few-mode Bragg grating (PM-FMF-FBG) based on the wavelength and phase modulation of the even L P 11 mode. The wavelength shift sensitivity and the interrogated phase sensitivity of the temperature and strain were measured to be 10 pm·°C-1 and 0.73 pm·µÎµ-1 and -3.2 × 10-2 rad·°C-1 and 4 × 10-4 rad·µÎµ-1, respectively, with a discrimination efficiency of 98%. The polarization interference led to selective polarization excitation of the reflection spectra, and the calculated phase sensitivity agreed with the experimental results.

Design of a high-performance in-coupling grating using differential evolution algorithm for waveguide display.

Illuminance nonuniformity caused by natural vignetting can seriously affect the display quality of large-field-of-view (FOV) waveguide displays. In this paper, an optimization method based on the differential evolution algorithm is proposed for in-coupling grating design to improve coupling efficiency and compensate for natural vignetting. The in-coupling grating parameters are optimized to achieve efficiency distributions in which efficiency increases continuously with incidence angle, realizing uniform illuminance over a large FOV of 45°. The angular uniformity reaches 0.89. Additionally, average diffraction efficiency reaches 89.13% for transverse-electric polarization at 532 nm and 76% in the wavelength region between 450 and 700 nm.

Compact high-resolution spectrometer using two plane gratings with triple dispersion.

We demonstrate a compact high-resolution spectrometer scheme using two plane gratings. In this approach, the rays are first diffracted by a fixed grating, then incident on a rotating grating at the Littrow diffraction angle, and are finally diffracted and reflected back to the fixed grating again. Thus, triple dispersion (TD) occurs during measurement, increasing the resolution. The formulae of this compact high-resolution spectrometer are rigorously derived. A design simulation with two gratings of 1050 lines/mm is performed and discussed. In addition, a prototype of this spectrometer has been built and tested. Its spectral resolution reaches a precision of 36 pm.

Prevalence of intestinal parasites in companion dogs with diarrhea in Beijing, China, and genetic characteristics of Giardia and Cryptosporidium species.

Companion animals including dogs are one of the important components in One Health. Parasites may cause not only diseases in pet animals but also many zoonotic diseases infecting humans. In this study, we performed a survey of intestinal parasites in fecal specimens (n = 485) collected from outpatient pet dogs with diarrhea in Beijing, China, for the entire year of 2015 by microscopic examination (all parasites) and SSU rRNA-based nested PCR detection (Giardia and Cryptosporidium). We observed a total of 124 (25.6%) parasite-positive specimens that contained one or more parasites, including Giardia duodenalis (12.8%), Cryptosporidium spp. (4.9%), Cystoisospora spp. (4.3%), trichomonads (4.3%), Toxocara canis (3.5%), Trichuris vulpis (0.6%), and Dipylidium caninum (0.2%). Among the 55 dog breeds, infection rates were significantly higher in border collies and bulldogs, but lower in poodles (p < 0.05). Risk factor analysis suggested that age was negatively correlated with the infection rate (p < 0.00001), while vaccination and deworming in the past 12 months could significantly reduce the parasite infections (p < 0.01). Among the 62 Giardia-positive specimens, 21 were successfully assigned into assemblages using glutamate dehydrogenase (gdh) and/or beta-giardin (bg) genes, including assemblage D (n = 15), C (n = 5), and F (n = 1). Among the 24 Cryptosporidium-positive specimens by SSU rRNA PCR, 20 PCR amplicons could be sequenced and identified as Cryptosporidium canis (n = 20). Collectively, this study indicates that parasites are a significant group of pathogens in companion dogs in Beijing, and companion dogs may potentially transmit certain zoonotic parasites to humans, particularly those with weak or weakened immunity.

Direct Demonstration That Loop1 of Scap Binds to Loop7: A CRUCIAL EVENT IN CHOLESTEROL HOMEOSTASIS.

Cholesterol homeostasis is mediated by Scap, a polytopic endoplasmic reticulum (ER) protein that transports sterol regulatory element-binding proteins from the ER to Golgi, where they are processed to forms that activate cholesterol synthesis. Scap has eight transmembrane helices and two large luminal loops, designated Loop1 and Loop7. We earlier provided indirect evidence that Loop1 binds to Loop7, allowing Scap to bind COPII proteins for transport in coated vesicles. When ER cholesterol rises, it binds to Loop1. We hypothesized that this causes dissociation from Loop7, abrogating COPII binding. Here we demonstrate direct binding of the two loops when expressed as isolated fragments or as a fusion protein. Expressed alone, Loop1 remained intracellular and membrane-bound. When Loop7 was co-expressed, it bound to Loop1, and the soluble complex was secreted. A Loop1-Loop7 fusion protein was also secreted, and the two loops remained bound when the linker between them was cleaved by a protease. Point mutations that disrupt the Loop1-Loop7 interaction prevented secretion of the Loop1-Loop7 fusion protein. These data provide direct documentation of intramolecular Loop1-Loop7 binding, a central event in cholesterol homeostasis.

Compact broadband high-resolution infrared spectrometer with a dihedral reflector.

We demonstrate a compact broadband high-resolution spectrometer approach. A dihedral reflector is used to reflect the dispersed light back to the grating for a second diffraction, folding the light path in a compact space, and enhancing the spectral resolution. The theoretical formulas for the system are strictly derived. In addition, a prototype of this spectrometer for fiber communication in the infrared wavelength range has been built. The optics can fit inside a volume of 12 cm × 14 cm × 5 cm and its spectral resolution is 57 pm over a wide wavelength range from 1250 nm to 1650 nm.

Detection of virus in CSF from the cases with meningoencephalitis by next-generation sequencing.

We screened for viral DNA in cerebrospinal fluid samples using next-generation sequencing (NGS) technology to diagnose CNS viral infections. We collected CSF samples from four cases with clinically suspected viral meningoencephalitis. DNA extracted from the samples was analyzed with NGS, and the results were further validated using PCR. Herpes simplex virus 1 (HSV-1) was detected in the CSF of two patients, HSV-2 and human herpes virus type 3 (HHV-3, VZV) in the CSF of two other patients separately. The number of unique reads of the identified viral genes ranged from 144 to 44205 (93.51 to 99.57%). The coverage of identified viral genes ranged from 12 to 98% with a depth value of 1.1 to 35, respectively. The results were further confirmed using PCR in three cases. The clinical presentation and outcomes of these four cases were consistent with the diagnostic results of NGS. NGS of CSF samples can be used as a diagnostic assay for CNS viral infection. Its further application for "pan-viral" or even "pan-microbial" screening of CSF might influence the diagnosis of CNS infectious diseases.

Coherent anti-Stokes Raman scattering imaging under ambient light.

We demonstrate an ambient light coherent anti-Stokes Raman scattering microscope that allows CARS imaging to be operated under environmental light for field use. The CARS signal is modulated at megahertz frequency and detected by a photodiode equipped with a lab-built resonant amplifier, then extracted through a lock-in amplifier. The filters in both the spectral domain and the frequency domain effectively blocked the room light contamination of the CARS image. In situ hyperspectral CARS imaging of tumor tissue under ambient light is demonstrated.

[Detection System for High-Resolution and Broadband-2D Spectrogram].

In order to meet the demand of detecting the high-resolution and broadband-2D spectrogram for echelle-prism cross-dispersion, the design method is given, and the 2D spectrogram detection system with high-resolution and low noise is designed by analyzing the relation between the detector and the optical system and proving designing method of detecting the area spectrogram. The system includes a main control unit, a detector driving unit, a signal processing unit, a data storage unit and a data transmission unit, etc. With Hamamatsu's S10141-1109S CCD as the detector, the detection system features high sensitivity, broadband spectrogram, high signal to noise ratio. Combined with the echelle-prism cross-dispersion optical path to perform experiments, the results show that, the detection system can acquire high-resolution 2D spectrogram image in the range of 200 to 600 nm, the monochromatic image at 253.652 nm of Hg lamp covers 5 pixels, and the resolvable wavelength reaches 6.3 pm.

Point mutation in luminal loop 7 of Scap protein blocks interaction with loop 1 and abolishes movement to Golgi.

Scap is a polytopic protein of the endoplasmic reticulum (ER) that controls cholesterol homeostasis by transporting sterol regulatory element-binding proteins (SREBPs) from the ER to the Golgi complex. Scap has eight transmembrane helices (TM) joined by four small hydrophilic loops and three large loops. Two of the large loops (Loops 1 and 7) are in the ER lumen, and the other large loop (Loop 6) faces the cytosol where it binds COPII proteins that initiate transport to Golgi. Cholesterol binding to Loop 1 alters the configuration of Loop 6, precluding COPII binding and preventing the exit of Scap from the ER. Here, we create a point mutation (Y640S) in luminal Loop 7 that prevents Scap movement to Golgi. Trypsin cleavage assays show that Loop 6 of Scap(Y640S) is always in the configuration that precludes COPII binding, even in the absence of cholesterol. When expressed separately by co-transfection, the NH2-terminal portion of Scap (containing TM helices 1-6, including Loop 1) binds to the COOH-terminal portion (containing TM helices 7-8 and Loop 7) as determined by co-immunoprecipitation. This binding does not occur when Loop 7 contains the Y640S mutation. Co-immunoprecipitation is also abolished by a point mutation in Loop 1 (Y234A) that also prevents Scap movement. These data suggest that Scap Loop 1 must interact with Loop 7 to maintain Loop 6 in the configuration that permits COPII binding. These results help explain the operation of Scap as a sterol sensor.

Inserted rest period resensitizes MC3T3-E1 cells to fluid shear stress in a time-dependent manner via F-actin-regulated mechanosensitive channel(s).

The underlying cellular mechanism of anabolic effect recovered by inserting rest is not fully understood. In this work, we studied the role of F-actin regulated mechanosensitive channel(s) re-activation in mechanosensitivity modulation in vitro. Results showed that steady fluid shear stress (sFSS) stimulation with 30-min rest period was more potential in increasing alkalinephosphatase (ALP) activity than 10 and 0-min rest periods, and insertion of 30 min, but not 0 or 10 min, recovered the [Ca(2+)]i transient and contribution of the mechanosensitive channel(s). During the rest period, F-actin experienced polymerization (0-10 min), followed by depolymerization (10-30 min); inhibition of F-actin polymerization/depolymerization significantly increased/decreased the [Ca(2+)]i transient, as well as the contribution of the mechanosensitive channel(s) in subsequent sFSS stimulation. Our results demonstrated that the long rest period between sFSS loadings recruited [Ca(2+)]i transient via F-actin depolymerization-induced reactivation of mechanosensitive channel(s), suggesting that F-actin-regulated cellular stiffness could account for the decreased anabolic response during continuous mechanical loading in bone cells.