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1.
BMC Microbiol ; 24(1): 258, 2024 Jul 12.
Artículo en Inglés | MEDLINE | ID: mdl-38997629

RESUMEN

BACKGROUND: Endometrial hyperplasia (EH) is a precursor to endometrial cancer, and the role of the microbiome in its development is unclear. RESULTS: The present study investigated the uterine microbiome in patients with benign uterine conditions and endometrial hyperplasia. A significant structural shift in the uterine microbiome of patients with endometrial hyperplasia compared to those with benign conditions was found. Delftia, Serratia and Stenotrophomonas were significantly enriched in endometrial hyperplasia samples and associated with the presence of endometrial hyperplasia. CONCLUSIONS: The novel finding suggested that increased abundance of Delftia, Serratia and Stenotrophomonas is associated with the presence of endometrial hyperplasia. Further investigation is needed to determine the value of these microbes as biomarkers for endometrial hyperplasia.


Asunto(s)
Bacterias , Hiperplasia Endometrial , Microbiota , Útero , Femenino , Humanos , Hiperplasia Endometrial/microbiología , Hiperplasia Endometrial/patología , Útero/microbiología , Útero/patología , Persona de Mediana Edad , Bacterias/clasificación , Bacterias/aislamiento & purificación , Bacterias/genética , Adulto , ARN Ribosómico 16S/genética , Serratia/aislamiento & purificación , Serratia/genética , Serratia/patogenicidad , Stenotrophomonas/aislamiento & purificación , Stenotrophomonas/genética
2.
Acta Microbiol Immunol Hung ; 71(3): 242-247, 2024 Sep 18.
Artículo en Inglés | MEDLINE | ID: mdl-39186382

RESUMEN

Delftia acidovorans is an aerobic, non-fermenting Gram-negative bacterium (NFGNB), found in soil, water and hospital environments. It is rarely clinically significant, most commonly affecting hospitalized or immunocompromised patients. The present study aimed to explore the genomic characteristics of a Bulgarian clinical D. acidovorans isolate (designated Dac759) in comparison to all strains of this species with available genomes in the NCBI Genome database (n = 34). Dac759 was obtained in 2021 from the sputum of a 65-year-old female immunocompetent outpatient with bronchitis. Species identification using MALDI-TOF mass spectrometry, antimicrobial susceptibility testing, whole-genome sequencing (WGS), and phylogenomic analysis were performed. The isolate demonstrated high-level resistance to colistin (16 mg L-1); resistance to gentamicin; reduced susceptibility to piperacillin, piperacillin-tazobactam, ceftazidime, cefepime, ciprofloxacin, and levofloxacin; and susceptibility to imipenem, meropenem, amikacin, and tobramycin. The observed genome size (6.43 Mb) and GC content (66.76%) were comparable with the accessible data from sequenced D. acidovorans genomes. A limited number of resistance determinants were identified in the assembled genome as follows: blaOXA-459, emrE, oqxB, and mexCD-oprJ. The phylogenomic analysis indicated a high heterogenicity of the included D. acidovorans genomes. In conclusion, to the best of our knowledge, this is the first documented case of a clinically relevant D. acidovorans isolate in Bulgaria. Unlike the majority of reports in the literature, Dac759 affected a patient with no malignancies or other preexisting comorbidities. With this in mind, its genome sequence is a valuable resource for the fundamental study of uncommon bacterial pathogens of public health importance.


Asunto(s)
Antibacterianos , Bronquitis , Delftia acidovorans , Genoma Bacteriano , Pruebas de Sensibilidad Microbiana , Filogenia , Secuenciación Completa del Genoma , Humanos , Femenino , Anciano , Bulgaria , Antibacterianos/farmacología , Delftia acidovorans/genética , Delftia acidovorans/aislamiento & purificación , Bronquitis/microbiología , Bronquitis/tratamiento farmacológico , Pacientes Ambulatorios , Infecciones por Bacterias Gramnegativas/microbiología
3.
Biochem Genet ; 61(3): 1086-1096, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-36451050

RESUMEN

BACKGROUND: Delftia acidovorans is distributed widely in the environment and has the potential to promote the growth of plants and degrade organic pollutants. However, it is also an opportunistic pathogen for human and many reports demonstrated that D. acidovorans has strong resistance to aminoglycosides and polymyxins. OBJECTIVE: The aim of this work was to reveal the antibiotic resistance genes and pathogenic genes in a novel conditional pathogenic strain-D. acidovorans B804, which was isolated from the radiation-polluted soil from Xinjiang Uyghur Autonomous Region, China. METHODS: The antibiotic resistance test was performed according to the Kirby-Bauer disk diffusion method and evaluated by the standards of the Clinical and Laboratory Standards Institute guidelines. The genome of D. acidovorans B804 was sequenced by a PacBio RS II and Illumina HiSeq 4000 platform in Shanghai Majorbio Biopharm Technology Co., Ltd. (Shanghai, China). RESULTS: The multidrug resistance phenotypes of D. acidovorans B804 was experimentally confirmed and its genome was sequenced. The total size of D. acidovorans B804 genome was 6,661,314 bp with a GC content of 66.73%. 403 genes associated with antibiotic resistances were predicted. Meanwhile, 89 pathogenic genes were also predicted and 17 of these genes might be capable of causing diseases to human, such as infections and salmonellosis. CONCLUSIONS: This genomic information can be used as a reference sequence for comparative genomic studies. The results provided more insights regarding the pathogenesis and drug resistance mechanism of D. acidovorans, which will be meaningful for developing more effective therapies toward D. acidovorans-related diseases.


Asunto(s)
Delftia acidovorans , Humanos , Delftia acidovorans/genética , Delftia acidovorans/metabolismo , China , Antibacterianos/farmacología , Antibacterianos/metabolismo , Secuenciación Completa del Genoma , Secuencia de Bases
4.
Ecotoxicol Environ Saf ; 264: 115383, 2023 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-37634480

RESUMEN

Bacterial symbionts exhibiting co-evolutionary patterns with insect hosts play a vital role in the nutrient synthesis, metabolism, development, reproduction, and immunity of insects. The brown planthopper (BPH) has a strong ability to adapt to various environmental stresses and can develop resistance to broad-spectrum insecticides. We aimed to investigate whether gut symbionts of BPH play a major role in the detoxification of insecticides and host fitness in unfavorable environments. Nicotine-treated rice plants were exposed to BPH (early stage) and the gut microbiome of the emerging female adults were analyzed using high throughput sequencing (HTS). Nicotine administration altered the diversity and community structure of BPH symbionts with significant increases in bacterial members such as Microbacteriaceae, Comamondaceae, Enterobacteriaceae, and these changes may be associated with host survival strategies in adverse environments. Furthermore, the in-vitro study showed that four intestinal bacterial strains of BPH (Enterobacter NLB1, Bacillus cereus NL1, Ralstonia NLG26, and Delftia NLG11) could degrade nicotine when grown in a nicotine-containing medium, with the highest degradation (71%) observed in Delftia NLG11. RT-qPCR and ELISA analysis revealed an increased expression level of CYP6AY1 and P450 enzyme activities in Delftia NLG11, respectively. CYP6AY1 increased by 20% under the action of Delftia and nicotine, while P450 enzyme activity increased by 18.1%. After CYP6AY1 interference, nicotine tolerance decreased, and the mortality rate reached 76.65% on the first day and 100% on the third day. Moreover, Delftia NLG11 helped axenic BPHs to increase their survival rate when fed nicotine in the liquid-diet sac (LDS) feeding system. Compared with axenic BPHs, the survival rate improved by 25.11% on day 2% and 6.67% on day 3. These results revealed an altered gut microbiota and a cooperative relationship between Delftia NLG11 and CYP6AY1 in nicotine-treated BPH, suggesting that insects can adapt to a hostile environment by interacting with their symbionts and providing a new idea for integrated pest management strategies.


Asunto(s)
Delfines , Hemípteros , Insecticidas , Microbiota , Oryza , Animales , Nicotina/farmacología , Nicotina/metabolismo , Hemípteros/metabolismo , Insecticidas/metabolismo , Sistema Enzimático del Citocromo P-450/metabolismo , Oryza/química
5.
J Basic Microbiol ; 61(1): 55-62, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33332633

RESUMEN

The residual erythromycin in fermentation waste can pollute the environment and threaten human health. However, there are no effective approaches to remedy this issue. In this study, an erythromycin-degrading bacterium named RJJ-61 was isolated and identified as a strain of Delftia lacustris based on morphological and phylogenetic analyses. The degradation ability of this strain was also evaluated; it could degrade 45.18% of erythromycin at 35°C in 120 h. Furthermore, the key degradation gene ereA was cloned from strain RJJ-61 and expressed in Escherichia coli BL21; the molecular weight of the expressed protein was ~45 kDa. The enzyme activity of EreA was 108.0 mU ml-1 at 35°C and pH 7.0. Finally, the EreA protein was used to degrade erythromycin from mycelial dregs and 50% diluted solution, and the removal rates in them were 41.42% and 69.78%, respectively. In summary, D. lacustris RJJ-61 is a novel erythromycin-degrading strain that has great potential to remove erythromycin pollutants from the environment.


Asunto(s)
Hidrolasas de Éster Carboxílico/metabolismo , Delftia/metabolismo , Contaminantes Ambientales/metabolismo , Eritromicina/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Biodegradación Ambiental , Hidrolasas de Éster Carboxílico/genética , Delftia/enzimología , Escherichia coli/genética , Concentración de Iones de Hidrógeno , Filogenia , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Aguas del Alcantarillado/microbiología , Temperatura
6.
Antonie Van Leeuwenhoek ; 112(2): 283-295, 2019 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-30194506

RESUMEN

Few studies have evaluated endophytic bacteria in relation to plant growth promotion, nitrogen uptake and biological control. The aim of this study was to molecularly and physiologically characterize thirteen endophytic bacteria strains, evaluate their biological control properties and their ability to promote plant growth and plant N nutrition. All the strains produced indole acetic acid and promoted increase of plant biomass, N accumulative amount and N-use efficiency index. None of the strains carries the nifH gene. Four strains stimulated plant nitrate reductase activity, four solubilized phosphate, nine produced siderophores and none produced HCN. Seven strains inhibited Bipolaris sacchari growth and one was antagonistic to Ceratocystis paradoxa. The pathogens were inhibited by the production of diffusible and volatile metabolites by the bacterial strains. Moreover, this is the first study to demonstrate the effect of Delftia acidovorans on sugarcane plant growth, nitrogen metabolism improvement and antagonism to B. sacchari. The most efficient strains in promoting plant growth and exhibiting antagonistic activities towards fungal pathogens were Herbaspirillum frinsingense (IAC-BECa-152) and three Pantoea dispersa strains (IAC-BECa-128, IAC-BECa-129, and IAC-BECa-132). These bacteria show potential to be used as inoculants for sustainable agricultural management, mainly at the seedling production phase.


Asunto(s)
Bacterias/aislamiento & purificación , Endófitos/aislamiento & purificación , Nitrógeno/metabolismo , Saccharum/crecimiento & desarrollo , Saccharum/microbiología , Bacterias/clasificación , Bacterias/genética , Bacterias/metabolismo , Endófitos/clasificación , Endófitos/genética , Endófitos/metabolismo , Filogenia , Saccharum/metabolismo , Sideróforos/metabolismo
7.
Emerg Infect Dis ; 24(3): 594-596, 2018 03.
Artículo en Inglés | MEDLINE | ID: mdl-29460754

RESUMEN

Delftia tsuruhatensis, which was first isolated in environmental samples, was rarely associated with human infections. We report on pneumonia caused by D. tsuruhatensis in an infant who underwent cardiac surgery. Retrospective analyses detected 9 other isolates from 8 patients. D. tsuruhatensis is an emergent pathogen, at least for immunocompromised patients.


Asunto(s)
Enfermedades Transmisibles Emergentes/diagnóstico , Enfermedades Transmisibles Emergentes/microbiología , Infección Hospitalaria/diagnóstico , Infección Hospitalaria/microbiología , Delftia , Infecciones por Bacterias Gramnegativas/diagnóstico , Infecciones por Bacterias Gramnegativas/microbiología , Infecciones Oportunistas/diagnóstico , Infecciones Oportunistas/microbiología , Delftia/clasificación , Delftia/genética , Francia , Humanos , Lactante
8.
BMC Microbiol ; 18(1): 108, 2018 09 06.
Artículo en Inglés | MEDLINE | ID: mdl-30189831

RESUMEN

BACKGROUND: Dimethylphenols (DMP) are toxic compounds with high environmental mobility in water and one of the main constituents of effluents from petro- and carbochemical industry. Over the last few decades, the use of constructed wetlands (CW) has been extended from domestic to industrial wastewater treatments, including petro-carbochemical effluents. In these systems, the main role during the transformation and mineralization of organic pollutants is played by microorganisms. Therefore, understanding the bacterial degradation processes of isolated strains from CWs is an important approach to further improvements of biodegradation processes in these treatment systems. RESULTS: In this study, bacterial isolation from a pilot scale constructed wetland fed with phenols led to the identification of Delftia sp. LCW as a DMP degrading strain. The strain was able to use the o-xylenols 3,4-DMP and 2,3-DMP as sole carbon and energy sources. In addition, 3,4-DMP provided as a co-substrate had an effect on the transformation of other four DMP isomers. Based on the detection of the genes, proteins, and the inferred phylogenetic relationships of the detected genes with other reported functional proteins, we found that the phenol hydroxylase of Delftia sp. LCW is induced by 3,4-DMP and it is responsible for the first oxidation of the aromatic ring of 3,4-, 2,3-, 2,4-, 2,5- and 3,5-DMP. The enzyme may also catalyze both monooxygenation reactions during the degradation of benzene. Proteome data led to the identification of catechol meta cleavage pathway enzymes during the growth on ortho DMP, and validated that cleavage of the aromatic rings of 2,5- and 3,5-DMPs does not result in mineralization. In addition, the tolerance of the strain to high concentrations of DMP, especially to 3,4-DMP was higher than that of other reported microorganisms from activated sludge treating phenols. CONCLUSIONS: LCW strain was able to degraded complex aromatics compounds. DMPs and benzene are reported for the first time to be degraded by a member of Delftia genus. In addition, LCW degraded DMPs with a first oxidation of the aromatic rings by a phenol hydroxylase, followed by a further meta cleavage pathway. The higher resistance to DMP toxicity, the ability to degrade and transform DMP isomers and the origin as a rhizosphere bacterium from wastewater systems, make LCW a suitable candidate to be used in bioremediation of complex DMP mixtures in CWs systems.


Asunto(s)
Delftia/metabolismo , Fenoles/química , Fenoles/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Biodegradación Ambiental , Delftia/clasificación , Delftia/genética , Delftia/aislamiento & purificación , Isomerismo , Oxigenasas de Función Mixta/genética , Oxigenasas de Función Mixta/metabolismo , Filogenia , Microbiología del Suelo , Humedales
9.
Microb Ecol ; 75(2): 487-494, 2018 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-28735425

RESUMEN

Microbial communities associated to the gut of insects are attracting an increasing interest, mainly because of their role in influencing several host life-traits. The characterization of the gut microbial community is pivotal for understanding insect ecology and, thus, to develop novel pest management strategies. The pine processionary moth, Thaumetopoea pytiocampa (Denis & Schiff.) (Lepidoptera: Thaumetopoeidae), is a severe defoliator of pine forests, able to feed on several pine species. In this work, we performed a metabarcoding analysis to investigate, for the first time, the diversity of the gut bacterial community of pine processionary larvae associated with three different host pine species (Pinus halepensis, Pinus nigra subsp. laricio, and Pinus pinaster). We found that the gut microbial community of T. pityocampa larvae collected on P. halapensis was different from that associated with larvae collected from P. nigra and P. pinaster. Moreover, the high presence of bacteria belonging to the genera Modestobacter, Delftia, and unidentified Methylobacteriaceae retrieved in larvae feeding on P. halapensis suggested that specific interactions can occur. Our results provide the evidence that different host plant differently impact on the microbiota diversity of T. pityocampa larvae, contributing to the general knowledge of this pest with information that could be useful in shaping the next generation of pest control strategies.


Asunto(s)
Bacterias/aislamiento & purificación , Microbioma Gastrointestinal , Mariposas Nocturnas/microbiología , Pinus/parasitología , Animales , Bacterias/clasificación , Bacterias/genética , Biodiversidad , Conducta Alimentaria , Larva/microbiología , Larva/fisiología , Mariposas Nocturnas/fisiología , Pinus/clasificación , Especificidad de la Especie
10.
Microb Ecol ; 75(2): 529-542, 2018 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-28905200

RESUMEN

The lower respiratory tract has been previously considered sterile in a healthy state, but advances in culture-independent techniques for microbial identification and characterization have revealed that the lung harbors a diverse microbiome. Although research on the lung microbiome is increasing and important questions were already addressed, longitudinal studies aiming to describe developmental stages of the microbial communities from the early neonatal period to adulthood are lacking. Thus, little is known about the early-life development of the lung microbiome and the impact of external factors during these stages. In this study, we applied a barcoding approach based on high-throughput sequencing of 16S ribosomal RNA gene amplicon libraries to determine age-dependent differences in the bacterial fraction of the murine lung microbiome and to assess potential influences of differing "environmental microbiomes" (simulated by the application of used litter material to the cages). We could clearly show that the diversity of the bacterial community harbored in the murine lung increases with age. Interestingly, bacteria belonging to the genera Delftia and Rhodococcus formed an age-independent core microbiome. The addition of the used litter material influenced the lung microbiota of young mice but did not significantly alter the community composition of adult animals. Our findings elucidate the dynamic nature of the early-life lung microbiota and its stabilization with age. Further, this study indicates that even slight environmental changes modulate the bacterial community composition of the lung microbiome in early life, whereas the lung microbes of adults demonstrate higher resilience towards environmental variations.


Asunto(s)
Bacterias/aislamiento & purificación , Pulmón/microbiología , Microbiota , Animales , Animales Recién Nacidos/microbiología , Bacterias/clasificación , Bacterias/genética , ADN Bacteriano/genética , ADN Ribosómico/genética , Femenino , Secuenciación de Nucleótidos de Alto Rendimiento , Ratones , Ratones Endogámicos BALB C
11.
Lett Appl Microbiol ; 67(3): 254-261, 2018 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-29856468

RESUMEN

Polyethylene terephthalate (PET), a synthetic polyester material made of diethyl terephthalate (DET) monomers, is widely used in plastic products of daily life and caused serious pollution to the global environment. Microbial metabolism is the major degradation pathway responsible for DET degradation in natural soil; however, the microbial DET degradation mechanism remains unclear. In this study, the newly isolated strain WL-3, identified as belonging to the genus Delftia, was found to be able to degrade 94% of 5 g l-1 of DET and utilize it as the sole carbon source for growth within 7 days. Furthermore, strain WL-3 was capable of stable DET degradation under a wide range of pH values (6·0-9·0) and temperatures (20-42°C) with the optimal pH and temperature of 7·0 and 30°C respectively. Furthermore, the biochemical pathway of DET degradation by strain WL-3 was proposed based on the identified degradation intermediates. DET is first transformed into terephthalic acid (TPA) by the hydrolysis of two ester bonds, which is subsequently converted to protocatechuic acid (PCA) and further mineralized. SEM observations revealed obvious cracks on the surface of PET film after inoculation of 2 months with strain WL-3, indicating the strain's potential for the bioremediation of PET-contaminated environments. SIGNIFICANCE AND IMPACT OF THE STUDY: This study demonstrates that Delftia sp. WL-3 can mineralize completely diethyl terephthalate by biochemical processes. The study reveals the metabolic mechanism of diethyl terephthalate biodegradation. Furthermore, the cracks on the surface of Polyethylene terephthalate film that form upon inoculation with strain WL-3 were observed using SEM. These results highlight the potential of the strain WL-3 in the bioremediation of environments contaminated with Polyethylene terephthalate or diethyl terephthalate.


Asunto(s)
Delftia/metabolismo , Ácidos Ftálicos/metabolismo , Tereftalatos Polietilenos/metabolismo , Biodegradación Ambiental , Delftia/clasificación , Delftia/genética , Delftia/aislamiento & purificación , Redes y Vías Metabólicas , Microbiología del Suelo
12.
Ecotoxicol Environ Saf ; 163: 223-229, 2018 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-30055387

RESUMEN

Bioremediation of heavy metal polluted soil using metal-resistant bacteria has received increasing attentions. In the present study, we isolated a heavy metal-resistant bacterial strain from a Cd-contaminated soil, and conducted pot experiments to evaluate the effect of bacterial inoculation in soil on soil Cd speciation, rice grain biomass and Cd accumulation. We find that the isolated bacterial strain is a Gram-negative bacterium, and named as Delftia sp. B9 based on the 16S rDNA gene sequence analysis. TEM-EDS manifests that Cd can be bioaccumulated inside cell, resulting in intracellular dissolution. The Cd contents of rice grain in the two rice cultivars (early and late rice) are all below the standard limit for Food Safety of People's Republic of China (0.2 mg/kg) after the treatment of both living and non-living cells. Non-living cells are more applicable than the use of living cells for the short time bioremediation. The average content of soil exchangeable fraction of Cd decreases whereas the residual fraction increases with bacterial inoculation. All our results suggest Delftia sp. B9 is able to the stabilization of Cd in soil and reduce Cd accumulation in rice grain, therefore, this strain is potentially suitable for the bioremediation of Cd-contaminated paddy soils.


Asunto(s)
Cadmio/metabolismo , Delftia/metabolismo , Grano Comestible/metabolismo , Oryza/metabolismo , Contaminantes del Suelo/metabolismo , Suelo/química , Biodegradación Ambiental , Biomasa , China , Grano Comestible/crecimiento & desarrollo , Metales Pesados , Oryza/crecimiento & desarrollo
13.
Biotechnol Appl Biochem ; 64(2): 259-269, 2017 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26800648

RESUMEN

Pseudomonas putida Bet001 and Delftia tsuruhatensis Bet002, isolated from palm oil mill effluent, accumulated poly(3-hydroxyalkanoates) (PHAs) when grown on aliphatic fatty acids, sugars, and glycerol. The substrates were supplied at 20:1 C/N mole ratio. Among C-even n-alkanoic acids, myristic acid gave the highest PHA content 26 and 28 wt% in P. putida and D. tsuruhatensis, respectively. Among C-odd n-alkanoic acids, undecanoic gave the highest PHA content at 40 wt% in P. putida and 46 wt% in D. tsuruhatensis on pentadecanoic acid. Sugar and glycerol gave <10 wt% of PHA content for both bacteria. Interestingly, D. tsuruhatensis accumulated both short- and medium-chain length PHA when supplied with n-alkanoic acids ranging from octanoic to lauric, sucrose, and glycerol with 3-hydroxybutyrate as the major monomer unit. In P. putida, the major hydroxyalkanoates unit was 3-hydroxyoctanoate and 3-hydroxydecanoate when grown on C-even acids. Conversely, 3-hydroxyheptanoate, 3-hydrxoynonanoate, and 3-hydroxyundecanoate were accumulated with C-odd acids. Weight-averaged molecular weight (Mw ) was in the range of 53-81 kDa and 107-415 kDa for P. putida and D. tsuruhatensis, respectively. Calorimetric analyses indicated that both bacteria synthesized semicrystalline polymer with good thermal stability with degradation temperature (Td ) ranging from 178 to 282 °C.


Asunto(s)
Delftia/metabolismo , Aceites de Plantas/química , Polihidroxialcanoatos/biosíntesis , Pseudomonas putida/metabolismo , Caprilatos/química , Carbono , Delftia/química , Ácidos Grasos/química , Glicerol/química , Peso Molecular , Aceite de Palma , Polihidroxialcanoatos/química , Pseudomonas putida/química
14.
Pol J Microbiol ; 66(3): 321-326, 2017 Sep 27.
Artículo en Inglés | MEDLINE | ID: mdl-29319524

RESUMEN

Delftia acidovorans MTCC 3363 was found to convert 16-dehydropregnenolone acetate (16-DPA) exclusively to 4-androstene-3, 17-dione (AD). Addition of 9α-hydroxylase inhibitors was not required for preventing the accumulation of byproducts. The effect of pH, temperature, substrate concentration, surfactants and carrier solvents on this bioconversion has been studied. 16-DPA was maximally converted in buffered medium at pH 7.0, at temperature 30°C and 0.5 mg ml-1 substrate concentration. Detergent addition and temperature above 35°C had deleterious effect on bioconversion. Dioxan was found to be the best carrier solvent for biotransformation of 16-DPA to AD.


Asunto(s)
Androstenodiona/metabolismo , Delftia acidovorans/metabolismo , Pregnenolona/análogos & derivados , Biotransformación/fisiología , Pregnenolona/metabolismo , Microbiología del Suelo
15.
Ecotoxicology ; 25(1): 234-47, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26589947

RESUMEN

Strain LZ-C, isolated from a petrochemical wastewater discharge site, was found to be resistant to heavy metals and to degrade various aromatic compounds, including naphenol, naphthalene, 2-methylnaphthalene and toluene. Data obtained from 16S rRNA gene sequencing showed that this strain was closely related to Delftia lacustris. The 5,889,360 bp genome of strain LZ-C was assembled into 239 contigs and 197 scaffolds containing 5855 predicted open reading frames (ORFs). Among these predicted ORFs, 464 were different from the type strain of Delftia. The minimal inhibitory concentrations were 4 mM, 30 µM, 2 mM and 1 mM for Cr(VI), Hg(II), Cd(II) and Pb(II), respectively. Both genome sequencing and quantitative real-time PCR data revealed that genes related to Chr, Czc and Mer family genes play important roles in heavy metal resistance in strain LZ-C. In addition, the Na(+)/H(+) antiporter NhaA is important for adaptation to high salinity resistance (2.5 M NaCl). The complete pathways of benzene and benzoate degradation were identified through KEGG analysis. Interestingly, strain LZ-C also degrades naphthalene but lacks the key naphthalene degradation gene NahA. Thus, we propose that strain LZ-C exhibits a novel protein with a function similar to NahA. This study is the first to reveal the mechanisms of heavy metal resistance and salinity tolerance in D. lacustris and to identify a potential 2-methylnaphthalene degradation protein in this strain. Through whole-genome sequencing analysis, strain LZ-C might be a good candidate for the bioremediation of heavy metals and polycyclic aromatic hydrocarbons.


Asunto(s)
Delftia/genética , Delftia/metabolismo , Genoma Bacteriano , Metales Pesados/metabolismo , Hidrocarburos Policíclicos Aromáticos/metabolismo , Contaminantes del Suelo/metabolismo , China , Reacción en Cadena en Tiempo Real de la Polimerasa , Análisis de Secuencia de ADN
17.
Biotechnol Bioeng ; 112(8): 1644-54, 2015 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-25728819

RESUMEN

To demonstrate elimination of bacterial biofilm on membranes to represent wastewater treatment as well as biofilm formed by antibiotic-resistant bacterial (ARB) to signify medical application, an antibiotic-resistant bacterium and its lytic bacteriophage were isolated from a full-scale wastewater treatment plant. Based on gram staining and complete 16 S rDNA sequencing, the isolated bacterium showed a more than 99% homology with Delftia tsuruhatensis, a gram-negative bacterium belonging to ß-proteobacteria. The Delftia lytic phage's draft genome revealed the phage to be an N4-like phage with 59.7% G + C content. No transfer RNAs were detected for the phage suggesting that the phage is highly adapted to its host Delftia tsuruhatensis ARB-1 with regard to codon usage, and does not require additional tRNAs of its own. The gene annotation of the Delftia lytic phage found three different components of RNA polymerase (RNAP) in the genome, which is a typical characteristic of N4-like phages. The lytic phage specific to D. tsuruhatensis ARB-1 could successfully remove the biofilm formed by it on a glass slide. The water flux through the membrane of a prototype lab-scale membrane bioreactor decreased from 47 L/h m(2) to ∼15 L/h m(2) over 4 days due to a biofilm formed by D. tsuruhatensis ARB-1. However, the flux increased to 70% of the original after the lytic phage application. Overall, this research demonstrated phage therapy's great potential to solve the problem of membrane biofouling, as well as the problems posed by pathogenic biofilms in external wounds and on medical instruments.


Asunto(s)
Bacteriófagos/crecimiento & desarrollo , Incrustaciones Biológicas , Reactores Biológicos/microbiología , Delftia/virología , Filtración/métodos , Membranas/microbiología , Purificación del Agua/métodos , Bacteriólisis , Composición de Base , Biopelículas/crecimiento & desarrollo , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , ADN Viral/química , ADN Viral/genética , Delftia/crecimiento & desarrollo , Farmacorresistencia Bacteriana , Genoma Viral , Datos de Secuencia Molecular , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN
18.
Lett Appl Microbiol ; 61(5): 460-8, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26258398

RESUMEN

UNLABELLED: The bacterial strain designated as WGR-UOM-BT1 isolated from rhizosphere of Rauwolfia serpentina exhibited broad-spectrum antifungal activity and also improved early plant growth. Based on morphological, biochemical and 16S rRNA gene sequence analyses, the strain BT1 was identified as Delftia tsuruhatensis (KF727978). Under in vitro conditions, the strain BT1 suppressed the growth of wide range of fungal phytopathogens. Purified antimicrobial metabolite from the strain BT1 was identified as nitrogen-containing heterocyclic compound, 'amino(5-(4-methoxyphenyl)-2-methyl-2-(thiophen-2-yl)-2,3-dihydrofuran-3-yl)methanol' (AMTM), with molecular mass of 340•40 and molecular formula of C17 H19 NO3 S. The strain BT1 was positive for rhizosphere colonization (tomato), IAA production, 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity and phosphate solubilization. Under laboratory and greenhouse conditions, the strain BT1 promoted plant growth and suppressed foliar and root fungal pathogens of tomato. Therefore, antimicrobial and disease protection properties of strain BT1 could serve as an effective biological control candidate against devastating fungal pathogens of vegetable plants. Besides, the production of IAA, P solubilization and ACC deaminase activity enhance its potential as a biofertilizer and may stabilize the plant performance under fluctuating environmental conditions. SIGNIFICANCE AND IMPACT OF THE STUDY: In this study, we reported that Delftia tsuruhatensis WGR-UOM-BT1 strain has the plant growth promotion activities such as rhizosphere colonization (tomato), IAA production, 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity and phosphate solubilization. This bacterial strain was found producing an antimicrobial nitrogen-containing heterocyclic compound identified as 'amino(5-(4-methoxyphenyl)-2-methyl-2-(thiophen-2-yl)-2,3-dihydrofuran-3-yl)methanol' [C17 H19 NO3 S] (AMTM), which is new to the bacterial world.


Asunto(s)
Antifúngicos/metabolismo , Agentes de Control Biológico/farmacología , Delftia/metabolismo , Enfermedades de las Plantas/prevención & control , Rauwolfia/microbiología , Tiofenos/farmacología , Antibiosis , Liasas de Carbono-Carbono/química , Delftia/clasificación , Delftia/genética , Hongos/efectos de los fármacos , Hongos/genética , Ácidos Indolacéticos/metabolismo , Solanum lycopersicum/microbiología , Desarrollo de la Planta , Enfermedades de las Plantas/microbiología , Raíces de Plantas/microbiología , ARN Ribosómico 16S/genética , Rhizobium/genética , Rizosfera , Tiofenos/síntesis química
19.
Biotechnol Lett ; 37(12): 2395-401, 2015 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-26264243

RESUMEN

OBJECTIVES: To confirm the reductive dehalogenation ability of the aerobic strain of Delftia sp. EOB-17, finding more evidences to support the hypothesis that reductive dehalogenation may occur extensively in aerobic bacteria. RESULTS: Delftia sp. EOB-17, isolated from terrestrial soil contaminated with halogenated aromatic compounds, completely degraded 0.2 mM DBHB in 28 h and released two equivalents of bromides under aerobic conditions in the presence of sodium succinate. LC-MS analysis revealed that DBHB was transformed to 4-hydroxybenzoate via 3-bromo-4-hydroxybenzoate by successive reductive dehalogenation. Highly conserved DBHB-degrading genes, including reductive dehalogenase gene (bhbA3) and the extra-cytoplasmic binding receptor gene (bhbB3), were also found in strain EOB-17 by genome sequencing. The optimal temperature and pH for DBHB reductive dehalogenation activity are 30 °C and 8, respectively, and 0.1 mM Cd(2+), Cu(2+), Hg(2+) and Zn(2+) strongly inhibited dehalogenation activity. CONCLUSIONS: The aerobic strain of Delftia sp. EOB-17 was confirmed to reductively dehalogenate DBHB under aerobic conditions, providing another evidence to support the hypothesis that reductive dehalogenation occurs extensively in aerobic bacteria.


Asunto(s)
Bromobenzoatos/metabolismo , Delftia/metabolismo , Aerobiosis , Biotransformación , Cromatografía Liquida , Delftia/aislamiento & purificación , Inhibidores Enzimáticos/metabolismo , Concentración de Iones de Hidrógeno , Espectrometría de Masas , Metales Pesados/metabolismo , Parabenos/metabolismo , Microbiología del Suelo , Temperatura
20.
Can J Infect Dis Med Microbiol ; 26(5): 277-9, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26600818

RESUMEN

Delftia acidovorans is an aerobic, nonfermenting Gram-negative bacillus. It is usually a nonpathogenic environmental organism and is rarely clinically significant. Although D acidovorans infection most commonly occurs in hospitalized or immunocompromised patients, there are also several reports documenting the infection in immunocompetent patients. The present article describes a B cell lymphoblastic leukemia patient with D acidovorans pneumonia who was successfully treated with antibiotic therapy. The present report indicates that unusual pathogens may be clinically significant in both immunocompromised and immunocompetent patients. D acidovorans is often resistant to aminoglycosides; therefore, rapid detection of this microorganism is important.


Le Delftia acidovorans est un bacille aérobie à Gram négatif sans pouvoir de fermentation. C'est un organisme généralement non pathogène présent dans l'environnement, qui est rarement significatif sur le plan clinique. Même si l'infection à D acidovorans s'observe surtout chez des patients hospitalisés ou immunodéprimés, plusieurs rapports le signalent chez des patients immunocompétents. Le présent article décrit un patient atteint d'une leucémie lymphoïde de type B compliquée par une pneumonie à D acidovorans éradiquée par antibiothérapie. D'après le présent rapport, des agents pathogènes inhabituels peuvent être cliniquement significatifs à la fois chez les patients immunodéprimés et chez les patients immunocompétents. Puisque le D acidovorans résiste souvent aux aminosides, il est important de le déceler rapidement.

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