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Mol Biol Rep ; 51(1): 763, 2024 Jun 14.
Artículo en Inglés | MEDLINE | ID: mdl-38874813

RESUMEN

BACKGROUND: Arabidopsis thaliana primary root growth has become a model for evo-devo studies due to its simplicity and facility to record cell proliferation and differentiation. To identify new genetic components relevant to primary root growth, we used a Genome-Wide Association Studies (GWAS) meta-analysis approach using data published in the last decade. In this work, we performed intra and inter-studies analyses to discover new genetic components that could participate in primary root growth. METHODS AND RESULTS: We used 639 accessions from nine different studies under control conditions and performed different GWAS tests. We found that primary root growth changes were associated with 41 genes, of which six (14.6%) have been previously described as inhibitors or promoters of primary root growth. The knockdown lines of two genes, Suppressor of Gene Silencing (SGS3), involved in tasiRNA processing, and a gene with a Sterile Alpha Motif (SAM) motif named NOJOCH MOOTS (NOJO), confirmed their role as repressors of primary root growth, none has been shown to participate in this developmental process before. CONCLUSIONS: In summary, our GWAS analysis of different available studies identified new genes that participate in primary root growth; two of them were identified as repressors of primary root growth.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Estudio de Asociación del Genoma Completo , Raíces de Plantas , Arabidopsis/genética , Arabidopsis/crecimiento & desarrollo , Estudio de Asociación del Genoma Completo/métodos , Raíces de Plantas/genética , Raíces de Plantas/crecimiento & desarrollo , Proteínas de Arabidopsis/genética , Regulación de la Expresión Génica de las Plantas/genética , Polimorfismo de Nucleótido Simple/genética , Fenotipo , Genes de Plantas/genética
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