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1.
Phys Chem Chem Phys ; 24(36): 21588-21592, 2022 Sep 21.
Artículo en Inglés | MEDLINE | ID: mdl-36069424

RESUMEN

Proteins tune the reactivity of metal sites; less understood is the impact of association with a redox partner. We demonstrate the utility of carbon-deuterium labels for selective analysis of delicate metal sites. Introduced into plastocyanin, they reveal substantial strengthening of the key Cu-Cys89 bond upon association with cytochrome f.


Asunto(s)
Cobre , Plastocianina , Carbono , Cobre/química , Citocromos f/metabolismo , Deuterio , Oxidación-Reducción , Plastocianina/química , Plastocianina/metabolismo
2.
Plant Cell Physiol ; 62(7): 1082-1093, 2021 Oct 29.
Artículo en Inglés | MEDLINE | ID: mdl-33772595

RESUMEN

In cyanobacteria and most green algae of the eukaryotic green lineage, the copper-protein plastocyanin (Pc) alternatively replaces the heme-protein cytochrome c6 (Cc6) as the soluble electron carrier from cytochrome f (Cf) to photosystem I (PSI). The functional and structural equivalence of 'green' Pc and Cc6 has been well established, representing an example of convergent evolution of two unrelated proteins. However, plants only produce Pc, despite having evolved from green algae. On the other hand, Cc6 is the only soluble donor available in most species of the red lineage of photosynthetic organisms, which includes, among others, red algae and diatoms. Interestingly, Pc genes have been identified in oceanic diatoms, probably acquired by horizontal gene transfer from green algae. However, the mechanisms that regulate the expression of a functional Pc in diatoms are still unclear. In the green eukaryotic lineage, the transfer of electrons from Cf to PSI has been characterized in depth. The conclusion is that in the green lineage, this process involves strong electrostatic interactions between partners, which ensure a high affinity and an efficient electron transfer (ET) at the cost of limiting the turnover of the process. In the red lineage, recent kinetic and structural modeling data suggest a different strategy, based on weaker electrostatic interactions between partners, with lower affinity and less efficient ET, but favoring instead the protein exchange and the turnover of the process. Finally, in diatoms the interaction of the acquired green-type Pc with both Cf and PSI may not yet be optimized.


Asunto(s)
Chlorophyta/metabolismo , Cianobacterias/metabolismo , Citocromos f/metabolismo , Transporte de Electrón , Evolución Molecular , Complejo de Proteína del Fotosistema I/metabolismo , Citocromos f/química , Cinética , Simulación del Acoplamiento Molecular , Complejo de Proteína del Fotosistema I/química , Estructura Terciaria de Proteína
3.
Plant Cell Physiol ; 62(1): 156-165, 2021 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-33289530

RESUMEN

Chloroplast glyceraldehyde-3-phosphate dehydrogenase (GAPDH) limits the regeneration of ribulose 1,5-bisphosphate (RuBP) in the Calvin-Benson cycle. However, it does not always limit the rate of CO2 assimilation. In the present study, the effects of overproduction of GAPDH on the rate of CO2 assimilation under elevated [CO2] conditions, where the capacity for RuBP regeneration limits photosynthesis, were examined in transgenic rice (Oryza sativa). GAPDH activity was increased to 3.2- and 4.5-fold of the wild-type levels by co-overexpression of the GAPDH genes, GAPA and GAPB, respectively. In the transgenic rice plants, the rate of CO2 assimilation under elevated [CO2] conditions increased by approximately 10%, whereas that under normal and low [CO2] conditions was not affected. These results indicate that overproduction of GAPDH is effective in improving photosynthesis under elevated [CO2] conditions, although its magnitude is relatively small. By contrast, biomass production of the transgenic rice plants was not greater than that of wild-type plants under elevated [CO2] conditions, although starch content tended to increase marginally.


Asunto(s)
Cloroplastos/enzimología , Gliceraldehído-3-Fosfato Deshidrogenasas/metabolismo , Oryza/metabolismo , Fotosíntesis , Dióxido de Carbono/metabolismo , Clorofila/metabolismo , Cloroplastos/metabolismo , Citocromos f/metabolismo , Regulación de la Expresión Génica de las Plantas , Gliceraldehído-3-Fosfato Deshidrogenasas/fisiología , Oryza/enzimología , Oryza/fisiología , Hojas de la Planta/metabolismo , Ribulosa-Bifosfato Carboxilasa/metabolismo
4.
Photosynth Res ; 149(1-2): 69-82, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-33817762

RESUMEN

When intact green leaves are exposed to the fluctuating light, in which high light (HL) and low light (LL) alternate, photosystem I (PSI) is readily damaged. This PSI inhibition is mostly alleviated by the addition of far-red (FR) light. Here, we grew Alocasia odora, a shade-tolerant species, at several light levels and examined their photosynthetic traits in relation to the fluctuating light-induced PSI inhibition. We found that, even in the absence of FR, PSI in LL-grown leaves was resistant to the fluctuating light. LL leaves showed higher chlorophyll (Chl) contents on leaf area basis, lower Chl a/b ratios, lower cytochrome f/P700 ratios, and lower PSII/PSI excitation ratios assessed by the 77 K fluorescence. Also, P700 in the HL phase of the fluctuating light was more oxidized. The results of the regression analyses of the PSI photoinhibition to these traits indicate that the lower electron flow rate to P700 and more excitation energy transfer to PSI protect PSI in LL-grown leaves. Both of these contribute oxidization of P700 to the efficient quencher form P700+. These features may be common in LL-grown shade-tolerant species, which are often exposed to strong sunflecks in their natural habitats.


Asunto(s)
Adaptación Ocular/fisiología , Alocasia/metabolismo , Arabidopsis/metabolismo , Citocromos f/metabolismo , Complejo de Proteína del Fotosistema I/metabolismo , Hojas de la Planta/metabolismo , Luz Solar/efectos adversos
5.
Physiol Plant ; 166(1): 320-335, 2019 May.
Artículo en Inglés | MEDLINE | ID: mdl-30740703

RESUMEN

Mechanisms of the complex formation between plastocyanin and cytochrome f in higher plants (Spinacia oleracea and Brassica rapa), green microalgae Chlamydomonas reinhardtii and two species of cyanobacteria (Phormidium laminosum and Nostoc sp.) were investigated using combined Brownian and molecular dynamics simulations and hierarchical cluster analysis. In higher plants and green algae, electrostatic interactions force plastocyanin molecule close to the heme of cytochrome f. In the subsequent rotation of plastocyanin molecule around the point of electrostatic contact in the vicinity of cytochrome f, copper (Cu) atom approaches cytochrome heme forming a stable configuration where cytochrome f molecule behaves as a rather rigid body without conformational changes. In Nostoc plastocyanin molecule approaches cytochrome f in a different orientation (head-on) where the stabilization of the plastocyanin-cytochrome f complex is accompanied by the conformational changes of the G188E189D190 loop that stabilizes the whole complex. In cyanobacterium P. laminosum, electrostatic preorientation of the approaching molecules was not detected, thus indicating that random motions rather than long-range electrostatic interactions are responsible for the proper mutual orientation. We demonstrated that despite the structural similarity of the investigated electron transport proteins in different photosynthetic organisms, the complexity of molecular mechanisms of the complex formation increases in the following sequence: non-heterocystous cyanobacteria - heterocystous cyanobacteria - green algae - flowering plants.


Asunto(s)
Chlorophyta/metabolismo , Cianobacterias/metabolismo , Citocromos f/metabolismo , Plastocianina/metabolismo , Transporte de Electrón , Oxidación-Reducción , Complejo de Proteína del Fotosistema I/metabolismo , Espectrometría de Fluorescencia
6.
Proc Natl Acad Sci U S A ; 112(13): E1678-87, 2015 Mar 31.
Artículo en Inglés | MEDLINE | ID: mdl-25775549

RESUMEN

Chloroplast genomes encode ∼ 37 proteins that integrate into the thylakoid membrane. The mechanisms that target these proteins to the membrane are largely unexplored. We used ribosome profiling to provide a comprehensive, high-resolution map of ribosome positions on chloroplast mRNAs in separated membrane and soluble fractions in maize seedlings. The results show that translation invariably initiates off the thylakoid membrane and that ribosomes synthesizing a subset of membrane proteins subsequently become attached to the membrane in a nuclease-resistant fashion. The transition from soluble to membrane-attached ribosomes occurs shortly after the first transmembrane segment in the nascent peptide has emerged from the ribosome. Membrane proteins whose translation terminates before emergence of a transmembrane segment are translated in the stroma and targeted to the membrane posttranslationally. These results indicate that the first transmembrane segment generally comprises the signal that links ribosomes to thylakoid membranes for cotranslational integration. The sole exception is cytochrome f, whose cleavable N-terminal cpSecA-dependent signal sequence engages the thylakoid membrane cotranslationally. The distinct behavior of ribosomes synthesizing the inner envelope protein CemA indicates that sorting signals for the thylakoid and envelope membranes are distinguished cotranslationally. In addition, the fractionation behavior of ribosomes in polycistronic transcription units encoding both membrane and soluble proteins adds to the evidence that the removal of upstream ORFs by RNA processing is not typically required for the translation of internal genes in polycistronic chloroplast mRNAs.


Asunto(s)
Cloroplastos/metabolismo , Ribosomas/metabolismo , Tilacoides/metabolismo , Zea mays/genética , Núcleo Celular/metabolismo , Citocromos f/metabolismo , Genoma del Cloroplasto , Proteínas de la Membrana/metabolismo , Hibridación de Ácido Nucleico , Análisis de Secuencia por Matrices de Oligonucleótidos , Sistemas de Lectura Abierta , Proteínas de Plantas/genética , Plastidios/metabolismo , Biosíntesis de Proteínas , Procesamiento Proteico-Postraduccional , Transporte de Proteínas , ARN Mensajero/metabolismo , Solubilidad , Zea mays/metabolismo
7.
Biochim Biophys Acta ; 1857(6): 819-30, 2016 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-27056771

RESUMEN

Electrochromic shift measurements confirmed that the Q-cycle operated in sunflower leaves. The slow temporarily increasing post-pulse phase was recorded, when ATP synthase was inactivated in the dark and plastoquinol (PQH(2)) oxidation was initiated by a short pulse of far-red light (FRL). During illumination by red light, the Q-cycle-supported proton arrival at the lumen and departure via ATP synthase were simultaneous, precluding extreme build-up of the membrane potential. To investigate the kinetics of the Q-cycle, less than one PQH(2) per cytochrome b(6)f (Cyt b(6)f) were reduced by illuminating the leaf with strong light pulses or single-turnover Xe flashes. The post-pulse rate of oxidation of these PQH2 molecules was recorded via the rate of reduction of plastocyanin (PC(+)) and P700(+), monitored at 810 and 950 nm. The PSII-reduced PQH(2) molecules were oxidized with multi-phase overall kinetics, τ(d)=1, τ(p)=5.6 and τ(s)=16 ms (22 °C). We conclude that τ(d) characterizes PSII processes and diffusion, τ(p) is the bifurcated oxidation of the primary quinol and τ(s) is the Q-cycle-involving reduction of the secondary quinol at the n-site, its transport to the p-site, and bifurcated oxidation there. The extraordinary slow kinetics of the Q-cycle may be related to the still unsolved mechanism of the "photosynthetic control."


Asunto(s)
Complejo de Citocromo b6f/metabolismo , Hojas de la Planta/metabolismo , Proteínas de Plantas/metabolismo , Plastocianina/metabolismo , Plastoquinona/análogos & derivados , Algoritmos , Clorofila/metabolismo , Citocromos f/metabolismo , Transporte de Electrón , Helianthus/metabolismo , Helianthus/efectos de la radiación , Cinética , Luz , Complejos de Proteína Captadores de Luz/metabolismo , Modelos Biológicos , Oxidación-Reducción , Fotosíntesis/efectos de la radiación , Complejo de Proteína del Fotosistema I/metabolismo , Hojas de la Planta/efectos de la radiación , Plastoquinona/metabolismo
8.
Biochim Biophys Acta ; 1837(8): 1305-15, 2014 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-24685428

RESUMEN

The rapid transfer of electrons in the photosynthetic redox chain is achieved by the formation of short-lived complexes of cytochrome b6f with the electron transfer proteins plastocyanin and cytochrome c6. A balance must exist between fast intermolecular electron transfer and rapid dissociation, which requires the formation of a complex that has limited specificity. The interaction of the soluble fragment of cytochrome f and cytochrome c6 from the cyanobacterium Nostoc sp. PCC 7119 was studied using NMR spectroscopy and X-ray diffraction. The crystal structures of wild type, M58H and M58C cytochrome c6 were determined. The M58C variant is an excellent low potential mimic of the wild type protein and was used in chemical shift perturbation and paramagnetic relaxation NMR experiments to characterize the complex with cytochrome f. The interaction is highly dynamic and can be described as a pure encounter complex, with no dominant stereospecific complex. Ensemble docking calculations and Monte-Carlo simulations suggest a model in which charge-charge interactions pre-orient cytochrome c6 with its haem edge toward cytochrome f to form an ensemble of orientations with extensive contacts between the hydrophobic patches on both cytochromes, bringing the two haem groups sufficiently close to allow for rapid electron transfer. This model of complex formation allows for a gradual increase and decrease of the hydrophobic interactions during association and dissociation, thus avoiding a high transition state barrier that would slow down the dissociation process.


Asunto(s)
Citocromos c6/química , Citocromos f/química , Complejos Multiproteicos/química , Fotosíntesis , Cianobacterias/química , Cianobacterias/metabolismo , Citocromos c6/metabolismo , Citocromos f/metabolismo , Transporte de Electrón , Interacciones Hidrofóbicas e Hidrofílicas , Espectroscopía de Resonancia Magnética , Método de Montecarlo , Complejos Multiproteicos/metabolismo , Plastocianina/química , Plastocianina/metabolismo , Unión Proteica , Conformación Proteica , Mapas de Interacción de Proteínas , Difracción de Rayos X
9.
Plant Cell ; 24(6): 2649-65, 2012 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-22685165

RESUMEN

Fe deficiency is one of several abiotic stresses that impacts plant metabolism because of the loss of function of Fe-containing enzymes in chloroplasts and mitochondria, including cytochromes, FeS proteins, and Fe superoxide dismutase (FeSOD). Two pathways increase the capacity of the Chlamydomonas reinhardtii chloroplast to detoxify superoxide during Fe limitation stress. In one pathway, MSD3 is upregulated at the transcriptional level up to 10(3)-fold in response to Fe limitation, leading to synthesis of a previously undiscovered plastid-specific MnSOD whose identity we validated immunochemically. In a second pathway, the plastid FeSOD is preferentially retained over other abundant Fe proteins, heme-containing cytochrome f, diiron magnesium protoporphyrin monomethyl ester cyclase, and Fe2S2-containing ferredoxin, demonstrating prioritized allocation of Fe within the chloroplast. Maintenance of FeSOD occurs, after an initial phase of degradation, by de novo resynthesis in the absence of extracellular Fe, suggesting the operation of salvage mechanisms for intracellular recycling and reallocation.


Asunto(s)
Chlamydomonas reinhardtii/genética , Chlamydomonas reinhardtii/metabolismo , Hierro/metabolismo , Superóxido Dismutasa/metabolismo , Secuencia de Aminoácidos , Chlamydomonas reinhardtii/efectos de los fármacos , Proteínas de Cloroplastos/metabolismo , Cloroplastos/metabolismo , Citocromos f/metabolismo , Ferredoxinas/metabolismo , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Peróxido de Hidrógeno/metabolismo , Peróxido de Hidrógeno/farmacología , Datos de Secuencia Molecular , Estrés Fisiológico , Superóxido Dismutasa/genética
10.
J Biol Chem ; 288(10): 7024-36, 2013 Mar 08.
Artículo en Inglés | MEDLINE | ID: mdl-23303190

RESUMEN

Based on previous comparative genomic analyses, a set of nearly 600 polypeptides was identified that is present in green algae and flowering and nonflowering plants but is not present (or is highly diverged) in nonphotosynthetic organisms. The gene encoding one of these "GreenCut" proteins, CPLD38, is in the same operon as ndhL in most cyanobacteria; the NdhL protein is part of a complex essential for cyanobacterial respiration. A cpld38 mutant of Chlamydomonas reinhardtii does not grow on minimal medium, is high light-sensitive under photoheterotrophic conditions, has lower accumulation of photosynthetic complexes, reduced photosynthetic electron flow to P700(+), and reduced photochemical efficiency of photosystem II (ΦPSII); these phenotypes are rescued by a wild-type copy of CPLD38. Single turnover flash experiments and biochemical analyses demonstrated that cytochrome b6f function was severely compromised, and the levels of transcripts and polypeptide subunits of the cytochrome b6f complex were also significantly lower in the cpld38 mutant. Furthermore, subunits of the cytochrome b6f complex in mutant cells turned over much more rapidly than in wild-type cells. Interestingly, PTOX2 and NDA2, two major proteins involved in chlororespiration, were more than 5-fold higher in mutants relative to wild-type cells, suggesting a shift in the cpld38 mutant from photosynthesis toward chlororespiratory metabolism, which is supported by experiments that quantify the reduction state of the plastoquinone pool. Together, these findings support the hypothesis that CPLD38 impacts the stability of the cytochrome b6f complex and possibly plays a role in balancing redox inputs to the quinone pool from photosynthesis and chlororespiration.


Asunto(s)
Chlamydomonas reinhardtii/metabolismo , Complejo de Citocromo b6f/metabolismo , Proteínas del Complejo del Centro de Reacción Fotosintética/metabolismo , Proteínas de las Membranas de los Tilacoides/metabolismo , Chlamydomonas reinhardtii/genética , Clorofila/metabolismo , ATPasas de Translocación de Protón de Cloroplastos/genética , ATPasas de Translocación de Protón de Cloroplastos/metabolismo , Complejo de Citocromo b6f/genética , Citocromos b6/genética , Citocromos b6/metabolismo , Citocromos f/genética , Citocromos f/metabolismo , Transporte de Electrón , Expresión Génica , Immunoblotting , Luz , Mutación , Oxidación-Reducción , Fotosíntesis/genética , Fotosíntesis/efectos de la radiación , Proteínas del Complejo del Centro de Reacción Fotosintética/genética , Complejo de Proteína del Fotosistema I/genética , Complejo de Proteína del Fotosistema I/metabolismo , Complejo de Proteína del Fotosistema II/genética , Complejo de Proteína del Fotosistema II/metabolismo , Plastoquinona/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Proteínas de las Membranas de los Tilacoides/genética , Tilacoides/metabolismo
11.
Plant Cell ; 23(12): 4462-75, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-22209765

RESUMEN

Here, we identify Arabidopsis thaliana Lumen Thiol Oxidoreductase1 (LTO1) as a disulfide bond-forming enzyme in the thylakoid lumen. Using topological reporters in bacteria, we deduced a lumenal location for the redox active domains of the protein. LTO1 can partially substitute for the proteins catalyzing disulfide bond formation in the bacterial periplasm, which is topologically equivalent to the plastid lumen. An insertional mutation within the LTO1 promoter is associated with a severe photoautotrophic growth defect. Measurements of the photosynthetic activity indicate that the lto1 mutant displays a limitation in the electron flow from photosystem II (PSII). In accordance with these measurements, we noted a severe depletion of the structural subunits of PSII but no change in the accumulation of the cytochrome b(6)f complex or photosystem I. In a yeast two-hybrid assay, the thioredoxin-like domain of LTO1 interacts with PsbO, a lumenal PSII subunit known to be disulfide bonded, and a recombinant form of the molecule can introduce a disulfide bond in PsbO in vitro. The documentation of a sulfhydryl-oxidizing activity in the thylakoid lumen further underscores the importance of catalyzed thiol-disulfide chemistry for the biogenesis of the thylakoid compartment.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/enzimología , Complejo de Proteína del Fotosistema II/metabolismo , Tilacoides/enzimología , Vitamina K Epóxido Reductasas/metabolismo , Arabidopsis/efectos de los fármacos , Arabidopsis/fisiología , Proteínas de Arabidopsis/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Clonación Molecular , Citocromos f/metabolismo , ADN de Plantas/genética , ADN de Plantas/metabolismo , Disulfuros/metabolismo , Activación Enzimática , Escherichia coli/genética , Escherichia coli/metabolismo , Prueba de Complementación Genética , Vectores Genéticos/genética , Vectores Genéticos/metabolismo , Datos de Secuencia Molecular , Oxidación-Reducción , Fotosíntesis , Complejo de Proteína del Fotosistema II/genética , Hojas de la Planta/efectos de los fármacos , Hojas de la Planta/genética , Hojas de la Planta/metabolismo , Plásmidos/genética , Plásmidos/metabolismo , Regiones Promotoras Genéticas , Dominios y Motivos de Interacción de Proteínas , Proteínas de las Membranas de los Tilacoides/genética , Proteínas de las Membranas de los Tilacoides/metabolismo , Tilacoides/metabolismo , Transformación Genética , Técnicas del Sistema de Dos Híbridos , Vitamina K Epóxido Reductasas/genética
12.
Proc Natl Acad Sci U S A ; 108(50): 20248-53, 2011 Dec 13.
Artículo en Inglés | MEDLINE | ID: mdl-22128333

RESUMEN

The machinery that conducts the light-driven reactions of oxygenic photosynthesis is hosted within specialized paired membranes called thylakoids. In higher plants, the thylakoids are segregated into two morphological and functional domains called grana and stroma lamellae. A large fraction of the luminal volume of the granal thylakoids is occupied by the oxygen-evolving complex of photosystem II. Electron microscopy data we obtained on dark- and light-adapted Arabidopsis thylakoids indicate that the granal thylakoid lumen significantly expands in the light. Models generated for the organization of the oxygen-evolving complex within the granal lumen predict that the light-induced expansion greatly alleviates restrictions imposed on protein diffusion in this compartment in the dark. Experiments monitoring the redox kinetics of the luminal electron carrier plastocyanin support this prediction. The impact of the increase in protein mobility within the granal luminal compartment in the light on photosynthetic electron transport rates and processes associated with the repair of photodamaged photosystem II complexes is discussed.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Proteínas de Cloroplastos/metabolismo , Tilacoides/metabolismo , Arabidopsis/ultraestructura , Citocromos f/metabolismo , Oscuridad , Difusión , Cinética , Modelos Biológicos , Oxidación-Reducción , Tilacoides/ultraestructura
13.
Plant Physiol Biochem ; 208: 108480, 2024 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-38437751

RESUMEN

It is well established that programmed cell death (PCD) occurred in broccoli during postharvest senescence, but no studies have been conducted on the regulation of broccoli cytochrome f by mannose treatment and its relationship with PCD. In this study, we treated broccoli buds with mannose to investigate the changes in color, total chlorophyll content, gene expression related to chlorophyll metabolism, chloroplast structure, and cytochrome f determination during postharvest storage. In addition, to investigate the effect of cytochrome f on PCD, we extracted cytochrome f from broccoli and treated Nicotiana tabacum L. cv Bright Yellow 2 (BY-2) cells with extracted cytochrome f from broccoli at various concentrations. The results showed that cytochrome f can induce PCD in tobacco BY-2 cells, as evidenced by altered cell morphology, nuclear chromatin disintegration, DNA degradation, decreased cell viability, and increased caspase-3-like protease production. Taken together, our study indicated that mannose could effectively delay senescence of postharvest broccoli by inhibiting the expression of gene encoding cytochrome f which could induce PCD.


Asunto(s)
Brassica , Brassica/genética , Citocromos f/metabolismo , Manosa/metabolismo , Manosa/farmacología , Nicotiana/genética , Apoptosis , Clorofila/metabolismo
14.
J Am Chem Soc ; 135(20): 7681-92, 2013 May 22.
Artículo en Inglés | MEDLINE | ID: mdl-23627316

RESUMEN

Protein complex formation is thought to be at least a two-step process, in which the active complex is preceded by the formation of an encounter complex. The interactions in the encounter complex are usually dominated by electrostatic forces, whereas the active complex is also stabilized by noncovalent short-range forces. Here, the complex of cytochrome f and plastocyanin, electron-transfer proteins involved in photosynthesis, was studied using paramagnetic relaxation NMR spectroscopy. Spin labels were attached to cytochrome f, and the relaxation enhancements of plastocyanin nuclei were measured, demonstrating that a large part of the cytochrome f surface area is sampled by plastocyanin. In contrast, plastocyanin is always oriented with its hydrophobic patch toward cytochrome f. The complex was visualized using ensemble docking, showing that the encounter complex is stabilized by hydrophobic as well as electrostatic interactions. The results suggest a model of electrostatic preorientation before the proteins make contact, followed by the formation of an encounter complex that rapidly leads to electron-transfer active conformations by gradual increase of the overlap of nonpolar surface areas on cytochrome f and plastocyanin. In this model the distinction between the encounter and active complexes vanishes, at least in the case of electron-transfer complexes, which do not require a high degree of specificity.


Asunto(s)
Citocromos f/química , Resonancia Magnética Nuclear Biomolecular , Plastocianina/química , Citocromos f/aislamiento & purificación , Citocromos f/metabolismo , Interacciones Hidrofóbicas e Hidrofílicas , Modelos Moleculares , Método de Montecarlo , Plastocianina/metabolismo
15.
Genetics ; 225(2)2023 10 04.
Artículo en Inglés | MEDLINE | ID: mdl-37595062

RESUMEN

In plastids, conversion of light energy into ATP relies on cytochrome f, a key electron carrier with a heme covalently attached to a CXXCH motif. Covalent heme attachment requires reduction of the disulfide-bonded CXXCH by CCS5 and CCS4. CCS5 receives electrons from the oxidoreductase CCDA, while CCS4 is a protein of unknown function. In Chlamydomonas reinhardtii, loss of CCS4 or CCS5 yields a partial cytochrome f assembly defect. Here, we report that the ccs4ccs5 double mutant displays a synthetic photosynthetic defect characterized by a complete loss of holocytochrome f assembly. This defect is chemically corrected by reducing agents, confirming the placement of CCS4 and CCS5 in a reducing pathway. CCS4-like proteins occur in the green lineage, and we show that HCF153, a distant ortholog from Arabidopsis thaliana, can substitute for Chlamydomonas CCS4. Dominant suppressor mutations mapping to the CCS4 gene were identified in photosynthetic revertants of the ccs4ccs5 mutants. The suppressor mutations yield changes in the stroma-facing domain of CCS4 that restore holocytochrome f assembly above the residual levels detected in ccs5. Because the CCDA protein accumulation is decreased specifically in the ccs4 mutant, we hypothesize the suppressor mutations enhance the supply of reducing power through CCDA in the absence of CCS5. We discuss the operation of a CCS5-dependent and a CCS5-independent pathway controlling the redox status of the heme-binding cysteines of apocytochrome f.


Asunto(s)
Arabidopsis , Chlamydomonas reinhardtii , Citocromos f/genética , Citocromos f/metabolismo , Chlamydomonas reinhardtii/genética , Chlamydomonas reinhardtii/metabolismo , Disulfuros , Citocromos/química , Citocromos/metabolismo , Plastidios/genética , Plastidios/metabolismo , Oxidación-Reducción , Hemo/genética , Hemo/metabolismo , Arabidopsis/metabolismo
16.
Chembiochem ; 13(9): 1312-8, 2012 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-22619165

RESUMEN

Cytochrome f (Cyt f) and plastocyanin (Pc) form a highly transient complex as part of the photosynthetic redox chain. The complex from Nostoc sp. PCC 7119 was studied by NMR relaxation spectroscopy with the aim of determining the orientation of Pc relative to Cyt f. Chemical-shift-perturbation analysis showed that the presence of spin labels on the surface of Cyt f does not significantly affect the binding of Pc. The paramagnetic relaxation enhancement results are not consistent with a single orientation of Pc, thus indicating that multiple orientations must occur and suggesting that an encounter state represents a large fraction of the complex.


Asunto(s)
Citocromos f/metabolismo , Nostoc , Plastocianina/metabolismo , Citocromos f/química , Mesilatos/metabolismo , Modelos Moleculares , Resonancia Magnética Nuclear Biomolecular , Plastocianina/química , Unión Proteica , Conformación Proteica
17.
Physiol Plant ; 145(3): 395-405, 2012 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-22268610

RESUMEN

In this study, we tested for the temporal occurrence of photosynthetic acclimation to elevated [CO2] in the flag leaf of two important cereal crops, rice and wheat. In order to characterize the temporal onset of acclimation and the basis for any observed decline in photosynthetic rate, we characterized net photosynthesis, g(s) , g(m) , C(i) /C(a) , C(i) /C(c) , V(cmax) , J(max) , cell wall thickness, content of Rubisco, cytochrome (Cyt) f, N, chlorophyll and carbohydrate, mRNA expression for rbcL and petA, activity for Rubisco, sucrose phosphate synthase (SPS) and sucrose synthase (SS) at full flag expansion, mid-anthesis and the late grain-filling stage. No acclimation was observed for either crop at full flag leaf expansion. However, at the mid-anthesis stage, photosynthetic acclimation in rice was associated with RuBP carboxylation and regeneration limitations, while wheat only had the carboxylation limitation. By grain maturation, the decline of Rubisco content and activity had contributed to RuBP carboxylation limitation of photosynthesis in both crops at elevated [CO2]; however, the sharp decrease of Rubisco enzyme activity played a more important role in wheat. Although an increase in non-structural carbohydrates did occur during these later stages, it was not consistently associated with changes in SPS and SS or photosynthetic acclimation. Rather, over time elevated [CO2] appeared to enhance the rate of N degradation and senescence so that by late-grain fill, photosynthetic acclimation to elevated [CO2] in the flag leaf of either species was complete. These data suggest that the basis for photosynthetic acclimation with elevated [CO2] may be more closely associated with enhanced rates of senescence, and, as a consequence, may be temporally dynamic, with significant species variation.


Asunto(s)
Aclimatación , Dióxido de Carbono/metabolismo , Oryza/fisiología , Fotosíntesis , Hojas de la Planta/fisiología , Triticum/fisiología , Pared Celular/metabolismo , Pared Celular/fisiología , Cloroplastos/genética , Cloroplastos/metabolismo , Citocromos f/genética , Citocromos f/metabolismo , Activación Enzimática , Genes de Plantas , Glucosiltransferasas/metabolismo , Nitrógeno/metabolismo , Oryza/enzimología , Oryza/genética , Hojas de la Planta/enzimología , Hojas de la Planta/genética , ARN Mensajero/genética , ARN Mensajero/metabolismo , Ribulosa-Bifosfato Carboxilasa/genética , Ribulosa-Bifosfato Carboxilasa/metabolismo , Ribulosafosfatos/metabolismo , Semillas/genética , Semillas/metabolismo , Semillas/fisiología , Especificidad de la Especie , Triticum/enzimología , Triticum/genética
18.
J Biol Chem ; 285(39): 29738-49, 2010 Sep 24.
Artículo en Inglés | MEDLINE | ID: mdl-20628047

RESUMEN

The c-type cytochromes are metalloproteins with a heme molecule covalently linked to the sulfhydryls of a CXXCH heme-binding site. In plastids, at least six assembly factors are required for heme attachment to the apo-forms of cytochrome f and cytochrome c(6) in the thylakoid lumen. CCS5, controlling plastid cytochrome c assembly, was identified through insertional mutagenesis in the unicellular green alga Chlamydomonas reinhardtii. The complementing gene encodes a protein with similarity to Arabidopsis thaliana HCF164, which is a thylakoid membrane-anchored protein with a lumen-facing thioredoxin-like domain. HCF164 is required for cytochrome b(6)f biogenesis, but its activity and site of action in the assembly process has so far remained undeciphered. We show that CCS5 is a component of a trans-thylakoid redox pathway and operates by reducing the CXXCH heme-binding site of apocytochrome c prior to the heme ligation reaction. The proposal is based on the following findings: 1) the ccs5 mutant is rescued by exogenous thiols; 2) CCS5 interacts with apocytochrome f and c(6) in a yeast two-hybrid assay; and 3) recombinant CCS5 is able to reduce a disulfide in the CXXCH heme-binding site of apocytochrome f.


Asunto(s)
Chlamydomonas reinhardtii/metabolismo , Citocromos c6/metabolismo , Citocromos c/metabolismo , Proteínas Protozoarias/metabolismo , Tiorredoxinas/metabolismo , Tilacoides/metabolismo , Animales , Arabidopsis/genética , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Sitios de Unión , Chlamydomonas reinhardtii/genética , Citocromos c/genética , Citocromos c6/genética , Citocromos f/genética , Citocromos f/metabolismo , Hemo/genética , Hemo/metabolismo , Mutación , Oxidación-Reducción , Proteínas Protozoarias/genética , Tiorredoxinas/genética , Tilacoides/genética
19.
Plant Cell Environ ; 34(5): 764-77, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-21241332

RESUMEN

Effects of nitrogen (N) supply on the limiting step of CO(2) assimilation rate (A) at 380 µmol mol(-1) CO(2) concentration (A(380) ) at several leaf temperatures were studied in several crops, since N nutrition alters N allocation between photosynthetic components. Contents of leaf N, ribulose 1·5-bisphosphate carboxylase/oxygenase (Rubisco) and cytochrome f (cyt f) increased with increasing N supply, but the cyt f/Rubisco ratio decreased. Large leaf N content was linked to a high stomatal (g(s) ) and mesophyll conductance (g(m) ), but resulted in a lower intercellular (C(i) ) and chloroplast CO(2) concentration (C(c) ) because the increase in g(s) and g(m) was insufficient to compensate for change in A(380) . The A-C(c) response was used to estimate the maximum rate of RuBP carboxylation (V(cmax) ) and chloroplast electron transport (J(max) ). The J(max) /V(cmax) ratio decreased with reductions in leaf N content, which was consistent with the results of the cyt f/Rubisco ratio. Analysis using the C(3) photosynthesis model indicated that A(380) tended to be limited by RuBP carboxylation in plants grown at low N concentration, whereas it was limited by RuBP regeneration in plants grown at high N concentration. We conclude that the limiting step of A(380) depends on leaf N content and is mainly determined by N partitioning between Rubisco and electron transport components.


Asunto(s)
Dióxido de Carbono/metabolismo , Productos Agrícolas/fisiología , Nitrógeno/análisis , Hojas de la Planta/química , Temperatura , Cloroplastos/metabolismo , Citocromos f/metabolismo , Transporte de Electrón , Fotosíntesis , Hojas de la Planta/fisiología , Ribulosa-Bifosfato Carboxilasa/metabolismo
20.
Inorg Chem ; 50(4): 1242-9, 2011 Feb 21.
Artículo en Inglés | MEDLINE | ID: mdl-21250678

RESUMEN

His93Gly sperm whale myoglobin (H93G Mb) has the proximal histidine ligand removed to create a cavity for exogenous ligand binding, providing a remarkably versatile template for the preparation of model heme complexes. The investigation of model heme adducts is an important way to probe the relationship between coordination structure and catalytic function in heme enzymes. In this study, we have successfully generated and spectroscopically characterized the H93G Mb cavity mutant ligated with less common alkylamine ligands (models for Lys or the amine group of N-terminal amino acids) in numerous heme iron states. All complexes have been characterized by electronic absorption and magnetic circular dichroism spectroscopy in comparison with data for parallel imidazole-ligated H93G heme iron moieties. This is the first systematic spectral study of models for alkylamine- or terminal amine-ligated heme centers in proteins. High-spin mono- and low-spin bis-amine-ligated ferrous and ferric H93G Mb adducts have been prepared together with mixed-ligand ferric heme complexes with alkylamine trans to nitrite or imidazole as heme coordination models for cytochrome c nitrite reductase or cytochrome f, respectively. Six-coordinate ferrous H93G Mb derivatives with CO, NO, and O(2) trans to the alkylamine have also been successfully formed, the latter for the first time. Finally, a novel high-valent ferryl species has been generated. The data in this study represent the first thorough investigation of the spectroscopic properties of alkylamine-ligated heme iron systems as models for naturally occurring heme proteins ligated by Lys or terminal amines.


Asunto(s)
Aminas/metabolismo , Citocromos f/metabolismo , Lisina/metabolismo , Mioglobina/metabolismo , Nitrito Reductasas/metabolismo , Alquilación , Aminas/química , Animales , Sitios de Unión , Catálisis , Dicroismo Circular , Glicina/genética , Glicina/metabolismo , Histidina/genética , Histidina/metabolismo , Ligandos , Lisina/genética , Modelos Biológicos , Mutación , Mioglobina/química , Mioglobina/genética , Espectrometría Raman , Cachalote/genética , Cachalote/metabolismo
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