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1.
Nature ; 559(7715): 613-616, 2018 07.
Artículo en Inglés | MEDLINE | ID: mdl-30022163

RESUMEN

The global biosphere is commonly assumed to have been less productive before the rise of complex eukaryotic ecosystems than it is today1. However, direct evidence for this assertion is lacking. Here we present triple oxygen isotope measurements (∆17O) from sedimentary sulfates from the Sibley basin (Ontario, Canada) dated to about 1.4 billion years ago, which provide evidence for a less productive biosphere in the middle of the Proterozoic eon. We report what are, to our knowledge, the most-negative ∆17O values (down to -0.88‰) observed in sulfates, except for those from the terminal Cryogenian period2. This observation demonstrates that the mid-Proterozoic atmosphere was distinct from what persisted over approximately the past 0.5 billion years, directly reflecting a unique interplay among the atmospheric partial pressures of CO2 and O2 and the photosynthetic O2 flux at this time3. Oxygenic gross primary productivity is stoichiometrically related to the photosynthetic O2 flux to the atmosphere. Under current estimates of mid-Proterozoic atmospheric partial pressure of CO2 (2-30 times that of pre-anthropogenic levels), our modelling indicates that gross primary productivity was between about 6% and 41% of pre-anthropogenic levels if atmospheric O2 was between 0.1-1% or 1-10% of pre-anthropogenic levels, respectively. When compared to estimates of Archaean4-6 and Phanerozoic primary production7, these model solutions show that an increasingly more productive biosphere accompanied the broad secular pattern of increasing atmospheric O2 over geologic time8.


Asunto(s)
Ecosistema , Sedimentos Geológicos/química , Sedimentos Geológicos/microbiología , Oxígeno/análisis , Oxígeno/metabolismo , Azufre/análisis , Azufre/metabolismo , Atmósfera/química , Dióxido de Carbono/análisis , Historia Antigua , Ontario , Isótopos de Oxígeno/análisis , Isótopos de Oxígeno/metabolismo , Presión Parcial , Fotosíntesis , Probabilidad , Sulfatos/análisis , Sulfatos/metabolismo , Sulfuros/análisis , Sulfuros/metabolismo , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo
2.
Rapid Commun Mass Spectrom ; 35(5): e8985, 2021 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-33085126

RESUMEN

RATIONALE: The application of fertilisers to crops can be monitored and assessed using stable isotope ratios. However, the application of marine biofertilisers (e.g., fish, macroalgae/seaweed) on crop stable isotope ratios has been rarely studied, despite widespread archaeological and historical evidence for the use of marine resources as a soil amendment. METHODS: A heritage variety of Celtic bean, similar in size and shape to archaeobotanical macrofossils of Vicia faba L., was grown in three 1 × 0.5 m outdoor plots under three soil conditions: natural soil (control); natural soil mixed with macroalgae (seaweed); and 15 cm of natural soil placed on a layer of fish carcasses (Atlantic cod). These experiments were performed over two growing seasons in the same plots. At the end of each growing season, the plants were sampled, measured and analysed for carbon, nitrogen and sulphur stable isotope ratios (δ13 C, δ15 N, δ34 S). RESULTS: The bean plants freely uptake the newly bioavailable nutrients (nitrogen and sulphur) and incorporate a marine isotopic ratio into all tissues. The bean δ15 N values ranged between 0.8‰ and 1.0‰ in the control experiment compared with 2‰ to 3‰ in the macroalgae crop and 8‰ to 17‰ in the cod fish experiment. Their δ34 S values ranged between 5‰ and 7‰ in the control compared with 15‰ to 16‰ in the macroalgae crop and 9‰ to 12‰ in the cod fish crop. The beans became more 13 C-depleted (δ13 C values: 1-1.5‰ lower) due to crop management practices. CONCLUSIONS: Humans and animals consuming plants grown with marine biofertilisers will incorporate a marine signature. Isotopic enrichment in nitrogen and sulphur using marine resources has significant implications when reconstructing diets and farming practices in archaeological populations.


Asunto(s)
Isótopos de Carbono/análisis , Fertilizantes/análisis , Isótopos de Nitrógeno/análisis , Suelo/química , Isótopos de Azufre/análisis , Vicia faba/química , Animales , Isótopos de Carbono/metabolismo , Producción de Cultivos , Dieta , Gadus morhua , Humanos , Isótopos de Nitrógeno/metabolismo , Algas Marinas/química , Isótopos de Azufre/metabolismo , Vicia faba/crecimiento & desarrollo , Vicia faba/metabolismo
3.
Rapid Commun Mass Spectrom ; 31(20): 1720-1728, 2017 Oct 30.
Artículo en Inglés | MEDLINE | ID: mdl-28809062

RESUMEN

RATIONALE: Intrinsic biogeochemical markers, such as stable isotope ratios of carbon, nitrogen and sulphur, are increasingly used to trace the trophic ecology of marine top predators. However, insufficient knowledge of fractionation processes in tissues continues to hamper the use of these markers. METHODS: We performed a controlled feeding experiment with eight juvenile hooded seals (Cystophora cristata) that were held on a herring-based diet (Clupea harengus) for two years. Stable isotope ratios were measured via isotope ratio mass spectrometry in three of their tissues and related to values of these markers in their diet. RESULTS: Diet-tissue isotope enrichment (trophic enrichment factor, TEF) values between dietary herring and seal tissues for carbon (Δ13 C) were +0.7 ‰ for red blood cells, +1.9 ‰ for hair and +1.1 ‰ for muscle. The TEFs for nitrogen trophic (Δ15 N) were +3.3 ‰ for red blood cells, +3.6 ‰ for hair and +4.3 ‰ for muscle. For sulphur, the Δ34 S values were +1.1 ‰ for red blood cells, +1.0 ‰ for hair and +0.9 ‰ for muscle. CONCLUSIONS: These enrichment values were greater than those previously measured in adult seals. This increase may be related to the higher rate of protein synthesis and catabolism in growing animals. This study is the first report on sulphur isotope enrichment values for a marine mammal species.


Asunto(s)
Dieta , Phocidae/fisiología , Alimentación Animal/análisis , Fenómenos Fisiológicos Nutricionales de los Animales , Animales , Isótopos de Carbono/análisis , Isótopos de Carbono/metabolismo , Fraccionamiento Químico , Femenino , Masculino , Espectrometría de Masas , Isótopos de Nitrógeno/análisis , Isótopos de Nitrógeno/metabolismo , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo
4.
Proc Natl Acad Sci U S A ; 111(51): 18116-25, 2014 Dec 23.
Artículo en Inglés | MEDLINE | ID: mdl-25362045

RESUMEN

We present a quantitative model for sulfur isotope fractionation accompanying bacterial and archaeal dissimilatory sulfate respiration. By incorporating independently available biochemical data, the model can reproduce a large number of recent experimental fractionation measurements with only three free parameters: (i) the sulfur isotope selectivity of sulfate uptake into the cytoplasm, (ii) the ratio of reduced to oxidized electron carriers supporting the respiration pathway, and (iii) the ratio of in vitro to in vivo levels of respiratory enzyme activity. Fractionation is influenced by all steps in the dissimilatory pathway, which means that environmental sulfate and sulfide levels control sulfur isotope fractionation through the proximate influence of intracellular metabolites. Although sulfur isotope fractionation is a phenotypic trait that appears to be strain specific, we show that it converges on near-thermodynamic behavior, even at micromolar sulfate levels, as long as intracellular sulfate reduction rates are low enough (<<1 fmol H2S⋅cell(-1)⋅d(-1)).


Asunto(s)
Archaea/metabolismo , Bacterias/metabolismo , Isótopos de Azufre/metabolismo , Citoplasma/metabolismo , Modelos Biológicos , Isótopos de Azufre/clasificación
5.
Proc Natl Acad Sci U S A ; 110(21): 8443-6, 2013 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-23650346

RESUMEN

Sulfate is the second most abundant anion (behind chloride) in modern seawater, and its cycling is intimately coupled to the cycling of organic matter and oxygen at the Earth's surface. For example, the reduction of sulfide by microbes oxidizes vast amounts of organic carbon and the subsequent reaction of sulfide with iron produces pyrite whose burial in sediments is an important oxygen source to the atmosphere. The concentrations of seawater sulfate and the operation of sulfur cycle have experienced dynamic changes through Earth's history, and our understanding of this history is based mainly on interpretations of the isotope record of seawater sulfates and sedimentary pyrites. The isotope record, however, does not give a complete picture of the ancient sulfur cycle. This is because, in standard isotope mass balance models, there are more variables than constraints. Typically, in interpretations of the isotope record and in the absence of better information, one assumes that the isotopic composition of the input sulfate to the oceans has remained constant through time. It is argued here that this assumption has a constraint over the last 390 Ma from the isotopic composition of sulfur in coal. Indeed, these compositions do not deviate substantially from the modern surface-water input to the oceans. When applied to mass balance models, these results support previous interpretations of sulfur cycle operation and counter recent suggestions that sulfate has been a minor player in sulfur cycling through the Phanerozoic Eon.


Asunto(s)
Agua de Mar/química , Sulfatos/química , Sulfuros/química , Azufre/química , Carbón Mineral , Océanos y Mares , Oxidación-Reducción , Agua de Mar/microbiología , Sulfatos/metabolismo , Sulfuros/metabolismo , Azufre/metabolismo , Isótopos de Azufre/química , Isótopos de Azufre/metabolismo , Microbiología del Agua
6.
Appl Environ Microbiol ; 81(8): 2676-89, 2015 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-25662968

RESUMEN

Dissimilatory sulfate reduction is a microbial catabolic pathway that preferentially processes less massive sulfur isotopes relative to their heavier counterparts. This sulfur isotope fractionation is recorded in ancient sedimentary rocks and generally is considered to reflect a phenotypic response to environmental variations rather than to evolutionary adaptation. Modern sulfate-reducing microorganisms isolated from similar environments can exhibit a wide range of sulfur isotope fractionations, suggesting that adaptive processes influence the sulfur isotope phenotype. To date, the relationship between evolutionary adaptation and isotopic phenotypes has not been explored. We addressed this by studying the covariation of fitness, sulfur isotope fractionation, and growth characteristics in Desulfovibrio vulgaris Hildenborough in a microbial evolution experiment. After 560 generations, the mean fitness of the evolved lineages relative to the starting isogenic population had increased by ∼ 17%. After 927 generations, the mean fitness relative to the initial ancestral population had increased by ∼ 20%. Growth rate in exponential phase increased during the course of the experiment, suggesting that this was a primary influence behind the fitness increases. Consistent changes were observed within different selection intervals between fractionation and fitness. Fitness changes were associated with changes in exponential growth rate but changes in fractionation were not. Instead, they appeared to be a response to changes in the parameters that govern growth rate: yield and cell-specific sulfate respiration rate. We hypothesize that cell-specific sulfate respiration rate, in particular, provides a bridge that allows physiological controls on fractionation to cross over to the adaptive realm.


Asunto(s)
Desulfovibrio vulgaris/fisiología , Aptitud Genética , Sulfatos/metabolismo , Evolución Biológica , Desulfovibrio vulgaris/genética , Desulfovibrio vulgaris/crecimiento & desarrollo , Oxidación-Reducción , Isótopos de Azufre/metabolismo
7.
J Neurosci Res ; 92(11): 1573-80, 2014 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-24975129

RESUMEN

Synaptosomal protein synthesis from rat brain is selectively increased by learning and is massively enhanced during the recovery period from brain ischemia. To lay the groundwork for identification of the involved synaptic elements, we examined the effects induced by varying the concentrations of extracellular cations and endogenous calcium. Most of the recorded rate response curves exhibited biphasic profiles that suggested the presence of more than one translation system. Because comparable profiles were obtained by fully inhibiting mitochondrial translation, the data indicated the involvement of cytoplasmic translation systems present in different synaptosomal classes. Their properties may be individually investigated by exploiting the partially inhibited conditions we have described. The identification of the synaptic elements from which they originated and their newly synthesized proteins will significantly expand our understanding of the synaptic contribution to brain plastic events.


Asunto(s)
Corteza Cerebral/ultraestructura , Citoplasma/metabolismo , Metionina/metabolismo , Proteínas del Tejido Nervioso/metabolismo , Sinaptosomas/metabolismo , Animales , Calcimicina/farmacología , Calcio/metabolismo , Ionóforos de Calcio/farmacología , Cationes/farmacología , Quelantes/farmacología , Citoplasma/efectos de los fármacos , Ácido Egtácico/análogos & derivados , Ácido Egtácico/farmacología , Inhibidores Enzimáticos/farmacología , Masculino , Biosíntesis de Proteínas/efectos de los fármacos , Ratas , Ratas Wistar , Sulfonamidas/farmacología , Isótopos de Azufre/metabolismo , Sinaptosomas/efectos de los fármacos
8.
Environ Sci Technol ; 48(16): 9094-102, 2014 Aug 19.
Artículo en Inglés | MEDLINE | ID: mdl-25003498

RESUMEN

The microbial oxidation of sulfide is a key reaction of the microbial sulfur cycle, recycling sulfur in its most reduced valence state back to more oxidized forms usable as electron acceptors. Under anoxic conditions, nitrate is a preferential electron acceptor for this process. Two enzymatic pathways have been proposed for sulfide oxidation under nitrate reducing conditions, the sulfide:quinone oxidoreductase (SQR) pathway and the Sox (sulfur oxidation) system. In experiments with the model strains Thiobacillus denitrificans and Sulfurimonas denitrificans, both pathways resulted in a similar small sulfur and oxygen isotope fractionation of -2.4 to -3.6‰ for (34)S and -2.4 to -3.4‰ for (18)O. A similar pattern was detected during the oxidation of sulfide in a column percolated with sulfidic, nitrate amended groundwater. In experiments with (18)O-labeled water, a strong oxygen isotope fractionation was observed for T. denitrificans and S. denitrificans, indicating a preferential incorporation of (18)O-depleted oxygen released as water by nitrate reduction to nitrogen. The study indicates that nitrate-dependent sulfide oxidation might be monitored in the environment by analysis of (18)O-depleted sulfate.


Asunto(s)
Epsilonproteobacteria/metabolismo , Isótopos de Oxígeno/metabolismo , Sulfuros/metabolismo , Isótopos de Azufre/metabolismo , Thiobacillus/metabolismo , Nitratos/metabolismo , Oxidación-Reducción , Oxidorreductasas/metabolismo , Quinona Reductasas/metabolismo , Sulfatos/metabolismo
9.
Ecotoxicology ; 23(10): 2014-24, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25150982

RESUMEN

Inorganic pollutants in groundwater, such as sulfate and nitrate, have been a serious problem in China for decades. These pollutants are difficult to be removed because of their high solubility and ease of transport in subsurface environment. It had been found that microorganism could be one of the most feasible methods for inorganic pollutant elimination. During the process of degradation, some microorganisms can utilize sulfur and nitrogen in sulfate and nitrate forms, respectively, as energy sources. Meanwhile, significant variations of sulfur stable isotope ratios happened. Therefore sulfur isotope can be used as a good indicator for pollutant degradation and microbial activities. Shallow groundwater (SGW), deep groundwater (DGW), and surface water (SFW) were investigated in alluvial plain in Jiaozuo City, China. The results of hydrochemical analysis indicated that K(+), Na(+), and HCO3(-) were dominant ions in DGW, Mg(2+) and HCO3(-) were dominant ions in SGW, and Ca(2+) and HCO3 (-) were dominant in SFW except for LR sample. A wide variation of δ (34)SSO4 values ranging from + 7.3 to +23.6‰ had been observed for all water samples, with a mean value of +20.7, +12.6 and +10.0‰ for DGW, SGW, and SFW respectively. At the same time, δ(13)C values of dissolved inorganic carbon (DIC) ranged from -12.4 to -5.7‰, with a mean value of -7.5, -9.0, and -9.6‰ for DGW, SGW, and SFW, respectively. The microbial degradation processes resulted in significant sulfur isotope fractionations in DGW. Organic carbon was utilized by bacteria and transferred into inorganic carbon, leading to negative fractionation of carbon isotopes. Thus the variations in stable isotope ratios of sulfur and carbon in groundwater can be used as good indicators for understanding of the relationship between bacteria behaviors and sulfate degradation.


Asunto(s)
Bacterias/metabolismo , Monitoreo del Ambiente , Agua Subterránea/química , Sulfatos/análisis , Microbiología del Agua , Contaminantes Químicos del Agua/análisis , Biodegradación Ambiental , Isótopos de Carbono/análisis , China , Agua Subterránea/microbiología , Sulfatos/metabolismo , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo , Contaminantes Químicos del Agua/metabolismo
10.
Geobiology ; 22(3): e12600, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38725144

RESUMEN

Microbial sulfate reduction is central to the global carbon cycle and the redox evolution of Earth's surface. Tracking the activity of sulfate reducing microorganisms over space and time relies on a nuanced understanding of stable sulfur isotope fractionation in the context of the biochemical machinery of the metabolism. Here, we link the magnitude of stable sulfur isotopic fractionation to proteomic and metabolite profiles under different cellular energetic regimes. When energy availability is limited, cell-specific sulfate respiration rates and net sulfur isotope fractionation inversely covary. Beyond net S isotope fractionation values, we also quantified shifts in protein expression, abundances and isotopic composition of intracellular S metabolites, and lipid structures and lipid/water H isotope fractionation values. These coupled approaches reveal which protein abundances shift directly as a function of energy flux, those that vary minimally, and those that may vary independent of energy flux and likely do not contribute to shifts in S-isotope fractionation. By coupling the bulk S-isotope observations with quantitative proteomics, we provide novel constraints for metabolic isotope models. Together, these results lay the foundation for more predictive metabolic fractionation models, alongside interpretations of environmental sulfur and sulfate reducer lipid-H isotope data.


Asunto(s)
Desulfovibrio vulgaris , Proteómica , Isótopos de Azufre , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo , Desulfovibrio vulgaris/metabolismo , Proteoma/metabolismo , Proteoma/análisis , Metabolismo Energético , Metaboloma , Proteínas Bacterianas/metabolismo , Oxidación-Reducción , Sulfatos/metabolismo
11.
Appl Environ Microbiol ; 79(14): 4455-64, 2013 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-23686269

RESUMEN

During chemolithoautotrophic thiosulfate oxidation, the phylogenetically diverged proteobacteria Paracoccus pantotrophus, Tetrathiobacter kashmirensis, and Thiomicrospira crunogena rendered steady enrichment of (34)S in the end product sulfate, with overall fractionation ranging between -4.6‰ and +5.8‰. The fractionation kinetics of T. crunogena was essentially similar to that of P. pantotrophus, albeit the former had a slightly higher magnitude and rate of (34)S enrichment. In the case of T. kashmirensis, the only significant departure of its fractionation curve from that of P. pantotrophus was observed during the first 36 h of thiosulfate-dependent growth, in the course of which tetrathionate intermediate formation is completed and sulfate production starts. The almost-identical (34)S enrichment rates observed during the peak sulfate-producing stage of all three processes indicated the potential involvement of identical S-S bond-breaking enzymes. Concurrent proteomic analyses detected the hydrolase SoxB (which is known to cleave terminal sulfone groups from SoxYZ-bound cysteine S-thiosulfonates, as well as cysteine S-sulfonates, in P. pantotrophus) in the actively sulfate-producing cells of all three species. The inducible expression of soxB during tetrathionate oxidation, as well as the second leg of thiosulfate oxidation, by T. kashmirensis is significant because the current Sox pathway does not accommodate tetrathionate as one of its substrates. Notably, however, no other Sox protein except SoxB could be detected upon matrix-assisted laser desorption ionization mass spectrometry analysis of all such T. kashmirensis proteins as appeared to be thiosulfate inducible in 2-dimensional gel electrophoresis. Instead, several other redox proteins were found to be at least 2-fold overexpressed during thiosulfate- or tetrathionate-dependent growth, thereby indicating that there is more to tetrathionate oxidation than SoxB alone.


Asunto(s)
Alcaligenaceae/metabolismo , Hidrolasas/metabolismo , Paracoccus pantotrophus/metabolismo , Piscirickettsiaceae/metabolismo , Proteoma/metabolismo , Tiosulfatos/metabolismo , Procesos Autotróficos , Proteínas Bacterianas/metabolismo , Disulfuros/metabolismo , Oxidación-Reducción , Paracoccus pantotrophus/enzimología , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Isótopos de Azufre/metabolismo , Electroforesis Bidimensional Diferencial en Gel
12.
Mass Spectrom Rev ; 31(6): 683-97, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22422553

RESUMEN

The community phenotype as the sum of molecular functions of organisms living in consortia strongly depends on interactions within these communities. Therefore, the analyses of the most significant molecules in terms of the phenotype, the proteins, have to be performed on samples without disrupting the meta-species environment. Due to the increasing genomic information, proteins provide insights into a potential molecular function and the phylogenetic structure of the community. Unfortunately, the lists of identified proteins are often based first on the technical capacity of the used methods or instruments, and second on the interpretation of them by the assignment of molecular functions to proteins in databases. Especially in non-model organisms the functions of many proteins are often not known and an increasing number of studies indicate a significant amount of uncertainty. To decrease the dependency on assumptions and to enable functional insights by metaproteome approaches, the metabolic labeling from an isotopically labeled substrate can be used. Since the metabolites deriving from the substrate are very rarely species-specific, the incorporation of the stable isotope into proteins can be used as a surrogate marker for metabolic activity. The degree of incorporation can be determined accurately on the peptide level by mass spectrometry; additionally, the peptide sequence provides information on the metabolic active species. Thereby, protein-stable isotope probing (protein-SIP) adds functional information to metaproteome approaches. The classical metaproteome approaches will be reviewed with an emphasis on their attempts towards functional interpretation. The gain from functional insights into metaproteomics by using metabolic labeling of stable isotopes of carbon, nitrogen, and sulfur is reviewed with a focus on the techniques of measurement, calculation of incorporation and data processing.


Asunto(s)
Marcaje Isotópico/métodos , Proteínas/análisis , Proteómica/métodos , Animales , Bacterias/aislamiento & purificación , Fenómenos Fisiológicos Bacterianos , Isótopos de Carbono/análisis , Isótopos de Carbono/metabolismo , Monitoreo del Ambiente/métodos , Interacciones Huésped-Patógeno , Humanos , Isótopos de Nitrógeno/análisis , Isótopos de Nitrógeno/metabolismo , Proteínas/metabolismo , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo
13.
Rapid Commun Mass Spectrom ; 27(17): 1945-53, 2013 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-23939961

RESUMEN

RATIONALE: Stable isotope analysis in ecological studies is usually conducted on biomaterials, e.g. muscle and blood, that require catching the animals. Feces are rarely used for stable isotope analysis, despite the possibility of non-invasive sampling and short-term responsiveness to dietary changes. This promising method is neglected due to a lack of calibration experiments and unknown diet-feces isotopic difference (Δ(diet-feces)). METHODS: To fill this gap, we simulated trophic changes occurring in nature when animals switch feeding habitats, e.g. by moving from freshwater to terrestrial systems, from cultivated areas to forests or changing distance from marine environments. In a controlled experiment, the diet of two bat species (Myotis myotis, Rhinolophus ferrumequinum) was altered to an isotopically distinct one. We measured stable nitrogen, carbon and the rarely used sulfur isotope in feces, and calculated Δ(diet-feces) values. RESULTS: The feces acquired the new dietary signature within 2-3 h from food ingestion; thus, they are suited for detecting recent and rapid dietary changes. The Δ(diet-feces) (Δ) did not differ between species or diet (overall means ± standard deviation (sd)): Δ(15)N: 1.47 ± 1.51‰, Δ(13)C: -0.11 ± 0.80‰, Δ(34)S: 0.74 ± 1.10‰. Only Δ(15)N for M. myotis was significantly different from zero and only Δ(13) C differed among the days of the experiment. CONCLUSIONS: Fecal stable isotopes can be now further applied in mammalian ecology. This includes a range of applications, such as studying changes in trophic level, resource or habitat use, on a short time-scale. Such information is gaining importance for monitoring rapidly changing ecosystems under anthropogenic influence.


Asunto(s)
Isótopos de Carbono/análisis , Quirópteros/metabolismo , Heces/química , Alimentación Animal/análisis , Animales , Isótopos de Carbono/metabolismo , Ecosistema , Isótopos de Nitrógeno/análisis , Isótopos de Nitrógeno/metabolismo , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo
14.
Anal Bioanal Chem ; 405(9): 2889-99, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23052865

RESUMEN

We have evaluated the use of (34)S-labelled yeast to perform sulphur metabolic tracer experiments in laboratory animals. The proof of principle work included the selection of the culture conditions for the preparation of sulphur labelled yeast, the study of the suitability of this labelled yeast as sulphur source for tracer studies using in vitro gastrointestinal digestion and the administration of the (34)S-labelled yeast to laboratory animals to follow the fate and distribution of (34)S in the organism. For in vitro gastrointestinal digestion, the combination of sodium dodecyl sulphate-polyacrylamide gel electrophoresis and high-performance liquid chromatography and inductively coupled plasma mass spectrometry (HPLC-ICP-MS) showed that labelled methionine, cysteine and other low molecular weight sulphur-containing biomolecules were the major components in the digested extracts of the labelled yeast. Next, in vivo kinetic experiments were performed in healthy Wistar rats after the oral administration of (34)S-labelled yeast. The isotopic composition of total sulphur in tissues, urine and faeces was measured by double-focusing inductively coupled plasma mass spectrometry after microwave digestion. It was observed that measurable isotopic enrichments were detected in all samples. Finally, initial investigations on sulphur isotopic composition of serum and urine samples by HPLC-ICP-MS have been carried out. For serum samples, no conclusive data were obtained. Interestingly, chromatographic analysis of urine samples showed differential isotope enrichment for several sulphur-containing biomolecules.


Asunto(s)
Marcaje Isotópico/métodos , Espectrometría de Masas/métodos , Azufre/análisis , Azufre/metabolismo , Animales , Cromatografía Líquida de Alta Presión/métodos , Digestión , Electroforesis en Gel de Poliacrilamida , Heces/química , Masculino , Ratas , Ratas Wistar , Azufre/sangre , Azufre/orina , Isótopos de Azufre/análisis , Isótopos de Azufre/sangre , Isótopos de Azufre/metabolismo , Isótopos de Azufre/orina , Distribución Tisular , Levaduras/química
15.
J Neurosci ; 31(49): 18094-103, 2011 Dec 07.
Artículo en Inglés | MEDLINE | ID: mdl-22159121

RESUMEN

The involvement of reactive oxygen species (ROS) in morphine-induced analgesia and tolerance has been suggested, yet how and where ROS take part in these processes remains largely unknown. Here, we report a novel role for the superoxide-generating enzyme NOX1/NADPH oxidase in the regulation of analgesia and acute analgesic tolerance. In mice lacking Nox1 (Nox1(-/Y)), the magnitude of the analgesia induced by morphine was significantly augmented. More importantly, analgesic tolerance induced by repeated administration of morphine was significantly suppressed compared with that in the littermates, wild-type Nox1(+/Y). In a membrane fraction obtained from the dorsal spinal cord, no difference was observed in morphine-induced [(35)S]GTPγS-binding between the genotypes, whereas morphine-stimulated GTPase activity was significantly attenuated in Nox1(-/Y). At 2 h after morphine administration, a significant decline in [(35)S]GTPγS-binding was observed in Nox1(+/Y) but not in Nox1(-/Y). No difference in the maximal binding and affinity of [(3)H]DAMGO was observed between the genotypes, but the translocation of protein kinase C isoforms to the membrane fraction following morphine administration was almost completely abolished in Nox1(-/Y). Finally, the phosphorylation of RGS9-2 and formation of a complex by Gαi2/RGS9-2 with 14-3-3 found in morphine-treated Nox1(+/Y) were significantly suppressed in Nox1(-/Y). Together, these results suggest that NOX1/NADPH oxidase attenuates the pharmacological effects of opioids by regulating GTPase activity and the phosphorylation of RGS9-2 by protein kinase C. NOX1/NADPH oxidase may thus be a novel target for the development of adjuvant therapy to retain the beneficial effects of morphine.


Asunto(s)
Tolerancia a Medicamentos/genética , Hiperalgesia/tratamiento farmacológico , Morfina/uso terapéutico , NADH NADPH Oxidorreductasas/metabolismo , Narcóticos/uso terapéutico , Animales , Células Cultivadas , Modelos Animales de Enfermedad , Relación Dosis-Respuesta a Droga , Embrión de Mamíferos , Encefalina Ala(2)-MeFe(4)-Gli(5)/metabolismo , GTP Fosfohidrolasas/metabolismo , Ganglios Espinales/citología , Regulación de la Expresión Génica/efectos de los fármacos , Guanosina 5'-O-(3-Tiotrifosfato)/metabolismo , Guanosina Trifosfato/farmacología , Hiperalgesia/genética , Masculino , Ratones , Ratones Noqueados , NADH NADPH Oxidorreductasas/deficiencia , NADPH Oxidasa 1 , Neuroglía/efectos de los fármacos , Neuronas/efectos de los fármacos , Dimensión del Dolor , Umbral del Dolor/efectos de los fármacos , Umbral del Dolor/fisiología , Proteína Quinasa C/metabolismo , Proteínas RGS/metabolismo , ARN Mensajero , Médula Espinal/citología , Isótopos de Azufre/metabolismo , Superóxidos/metabolismo , Tritio/metabolismo
16.
Appl Environ Microbiol ; 78(23): 8368-76, 2012 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-23001667

RESUMEN

Sulfate-reducing microbes utilize sulfate as an electron acceptor and produce sulfide that is depleted in heavy isotopes of sulfur relative to sulfate. Thus, the distribution of sulfur isotopes in sediments can trace microbial sulfate reduction (MSR), and it also has the potential to reflect the physiology of sulfate-reducing microbes. This study investigates the relationship between the availability of iron and reduced nitrogen and the magnitude of S-isotope fractionation during MSR by a marine sulfate-reducing bacterium, DMSS-1, a Desulfovibrio species, isolated from salt marsh in Cape Cod, MA. Submicromolar levels of iron increase sulfur isotope fractionation by about 50% relative to iron-replete cultures of DMSS-1. Iron-limited cultures also exhibit decreased cytochrome c-to-total protein ratios and cell-specific sulfate reduction rates (csSRR), implying changes in the electron transport chain that couples carbon and sulfur metabolisms. When DMSS-1 fixes nitrogen in ammonium-deficient medium, it also produces larger fractionation, but it occurs at faster csSRRs than in the ammonium-replete control cultures. The energy and reducing power required for nitrogen fixation may be responsible for the reverse trend between S-isotope fractionation and csSRR in this case. Iron deficiency and nitrogen fixation by sulfate-reducing microbes may lead to the large observed S-isotope effects in some euxinic basins and various anoxic sediments.


Asunto(s)
Desulfovibrio/metabolismo , Hierro/metabolismo , Nitrógeno/metabolismo , Sulfatos/metabolismo , Isótopos de Azufre/metabolismo , ADN Bacteriano/química , ADN Bacteriano/genética , Desulfovibrio/aislamiento & purificación , Microbiología Ambiental , Marcaje Isotópico , Datos de Secuencia Molecular , Oxidación-Reducción , Análisis de Secuencia de ADN
18.
Phytochem Anal ; 23(4): 324-31, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-21987403

RESUMEN

INTRODUCTION: Sulphur-containing metabolites play an important role in metabolism and homeostasis. Determination of these metabolites is challenging owing to their low concentrations and the interference in mass spectrometry analysis. OBJECTIVE: To develop a sensitive and accurate method based on liquid chromatography, electrospray ionisation, tandem mass spectrometry (LC-ESI-MS/MS) and ³4S-metabolic labelling for quantification of methionine, reduced glutathione, oxidised glutathione in Arabidopsis thaliana. METHODOLOGY: A hydroponic set-up was used for the in vivo ³4S-metabolic labelling of A. thaliana. The ³4S-labelled metabolites biosynthesised in plant were extracted and used as internal standards. Tissue was extracted with perchloric acid (PCA) or PCA containing a known amount of the analytes for recovery analysis. Tissue extract mixed with extract of ³4S-labelled A. thaliana in an appropriate ratio was subjected to a LC system and electrospray ionisation-mass spectrometric (ESI-MS) analysis. Quantification of metabolites was measured by comparing the ³4S/³4S ratios obtained for samples with the calibration curves. RESULTS: Calibration curves showed linearity with regression coefficients in the range of 0.9994-0.9999. Analyte recoveries were approximately 100%. The coefficients of variation of intra-assay and inter-assay were less than 4.2% and 5%, respectively. The ranges for the limits of detection determined for Met, GSSG and GSH were 10 fmol, < 10 fmol and 1.12 fmol and the limits of quantification determined for Met, GSSG and GSH were 0.44 pmol, 0.16 pmol and 34 fmol, respectively. CONCLUSION: The validated method for determination of methionine, reduced glutathione and oxidised glutathione was effectively applied to measure metabolite dynamics of sulphur-containing metabolites at the whole-plant level.


Asunto(s)
Arabidopsis/metabolismo , Cromatografía Liquida/métodos , Espectrometría de Masa por Ionización de Electrospray/métodos , Azufre/metabolismo , Calibración , Glutatión/metabolismo , Disulfuro de Glutatión/metabolismo , Marcaje Isotópico , Límite de Detección , Percloratos/metabolismo , Estándares de Referencia , Reproducibilidad de los Resultados , Isótopos de Azufre/metabolismo
19.
J Neurosci ; 30(49): 16459-68, 2010 Dec 08.
Artículo en Inglés | MEDLINE | ID: mdl-21147985

RESUMEN

δ-Opioid receptors are G-protein-coupled receptors that regulate nociceptive and emotional responses. It has been well established that distinct agonists acting at the same G-protein-coupled receptor can engage different signaling or regulatory responses. This concept, known as biased agonism, has important biological and therapeutic implications. Ligand-biased responses are well described in cellular models, however, demonstrating the physiological relevance of biased agonism in vivo remains a major challenge. The aim of this study was to investigate the long-term consequences of ligand-biased trafficking of the δ-opioid receptor, at both the cellular and behavioral level. We used δ agonists with similar binding and analgesic properties, but high [SNC80 ((+)-4-[(αR)-α-((2S,5R)-4-allyl-2,5-dimethyl-1-piperazinyl)-3-methoxybenzyl]-N,N-diethylbenzamide)]- or low [ARM390 (N,N-diethyl-4-(phenyl-piperidin-4-ylidenemethyl)-benzamide)]-internalization potencies. As we found previously, a single SNC80-but not ARM390-administration triggered acute desensitization of the analgesic response in mice. However, daily injections of either compound over 5 d produced full analgesic tolerance. SNC80-tolerant animals showed widespread receptor downregulation, and tolerance to analgesic, locomotor and anxiolytic effects of the agonist. Hence, internalization-dependent tolerance developed, as a result of generalized receptor degradation. In contrast, ARM390-tolerant mice showed intact receptor expression, but δ-opioid receptor coupling to Ca²+ channels was abolished in dorsal root ganglia. Concomitantly, tolerance developed for agonist-induced analgesia, but not locomotor or anxiolytic responses. Therefore, internalization-independent tolerance was produced by anatomically restricted adaptations leading to pain-specific tolerance. Hence, ligand-directed receptor trafficking of the δ-opioid receptor engages distinct adaptive responses, and this study reveals a novel aspect of biased agonism in vivo.


Asunto(s)
Analgésicos/farmacología , Tolerancia a Medicamentos/fisiología , Ligandos , Umbral del Dolor/fisiología , Receptores Opioides delta/metabolismo , Analgésicos/uso terapéutico , Animales , Benzamidas/farmacología , Benzamidas/uso terapéutico , Encéfalo/ultraestructura , Calcio/metabolismo , Membrana Celular/efectos de los fármacos , Membrana Celular/genética , Modelos Animales de Enfermedad , Interacciones Farmacológicas , Tolerancia a Medicamentos/genética , Femenino , Adyuvante de Freund , Ganglios Espinales/citología , Proteínas Fluorescentes Verdes/genética , Guanosina 5'-O-(3-Tiotrifosfato)/metabolismo , Hiperalgesia/tratamiento farmacológico , Hiperalgesia/fisiopatología , Inflamación/inducido químicamente , Inflamación/complicaciones , Locomoción/efectos de los fármacos , Locomoción/genética , Masculino , Aprendizaje por Laberinto/efectos de los fármacos , Potenciales de la Membrana/efectos de los fármacos , Ratones , Ratones Endogámicos C57BL , Ratones Transgénicos , Dolor/tratamiento farmacológico , Dolor/etiología , Umbral del Dolor/efectos de los fármacos , Técnicas de Placa-Clamp/métodos , Piperazinas/farmacología , Piperazinas/uso terapéutico , Piperidinas/farmacología , Piperidinas/uso terapéutico , Unión Proteica/efectos de los fármacos , Transporte de Proteínas/genética , Transporte de Proteínas/fisiología , Receptores Opioides delta/agonistas , Receptores Opioides delta/genética , Células Receptoras Sensoriales/efectos de los fármacos , Médula Espinal/ultraestructura , Estadísticas no Paramétricas , Isótopos de Azufre/metabolismo , Factores de Tiempo
20.
Environ Sci Technol ; 45(7): 2863-70, 2011 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-21355530

RESUMEN

Isotope ratio measurements provide a tool for indicating the relative significance of biogeochemical reactions and for constraining estimates of the extent and rate of reactions in passive treatment systems. In this paper, the reactive transport model MIN3P is used to evaluate sulfur isotope fractionation in column experiments designed to simulate treatment of contaminated water by microbially mediated sulfate reduction occurring within organic carbon-based and iron and carbon-based permeable reactive barriers. A mass dependent fractionation model was used to determine reaction rates for 32S and 34S compounds during reduction, precipitation, and dissolution reactions and to track isotope-dependent mass transfer during SO4 removal. The δ34S values obtained from the MIN3P model were similar to those obtained from the Rayleigh equation, indicating that there was not a significant difference between the conceptual models. Differences between the MIN3P derived α value and the Rayleigh equation derived value were attributed to minor changes in the dissolution and precipitation rate of gypsum and mathematical differences in the fitting models. The results indicated that the prediction of δ34S was fairly insensitive to differences in the fractionation factor at the concentration ranges measured in the current study. However, more significant differences would be expected at low sulfate conditions.


Asunto(s)
Restauración y Remediación Ambiental/métodos , Modelos Químicos , Sulfatos/análisis , Contaminantes Químicos del Agua/análisis , Fraccionamiento Químico/métodos , Sulfatos/metabolismo , Isótopos de Azufre/análisis , Isótopos de Azufre/metabolismo , Microbiología del Agua , Contaminantes Químicos del Agua/metabolismo
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