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1.
BMC Biotechnol ; 20(1): 61, 2020 11 30.
Artículo en Inglés | MEDLINE | ID: mdl-33256756

RESUMEN

BACKGROUND: Harmful cyanobacterial blooms have attracted wide attention all over the world as they cause water quality deterioration and ecosystem health issues. Microcystis aeruginosa associated with a large number of bacteria is one of the most common and widespread bloom-forming cyanobacteria that secret toxins. These associated bacteria are considered to benefit from organic substrates released by the cyanobacterium. In order to avoid the influence of associated heterotrophic bacteria on the target cyanobacteria for physiological and molecular studies, it is urgent to obtain an axenic M. aeruginosa culture and further investigate the specific interaction between the heterotroph and the cyanobacterium. RESULTS: A traditional and reliable method based on solid-liquid alternate cultivation was carried out to purify the xenic cyanobacterium M. aeruginosa FACHB-905. On the basis of 16S rDNA gene sequences, two associated bacteria named strain B905-1 and strain B905-2, were identified as Pannonibacter sp. and Chryseobacterium sp. with a 99 and 97% similarity value, respectively. The axenic M. aeruginosa FACHB-905A (Microcystis 905A) was not able to form colonies on BG11 agar medium without the addition of strain B905-1, while it grew well in BG11 liquid medium. Although the presence of B905-1 was not indispensable for the growth of Microcystis 905A, B905-1 had a positive effect on promoting the growth of Microcystis 905A. CONCLUSIONS: The associated bacteria were eliminated by solid-liquid alternate cultivation method and the axenic Microcystis 905A was successfully purified. The associated bacterium B905-1 has the potentiality to promote the growth of Microcystis 905A. Moreover, the purification technique for cyanobacteria described in this study is potentially applicable to a wider range of unicellular cyanobacteria.


Asunto(s)
Cianobacterias/aislamiento & purificación , Cianobacterias/fisiología , Chryseobacterium , Cianobacterias/clasificación , Cianobacterias/genética , Ecología , Ecosistema , Procesos Heterotróficos , Microcystis/clasificación , Microcystis/genética , Microcystis/aislamiento & purificación , Microcystis/fisiología , Filogenia , Simbiosis
2.
Molecules ; 25(4)2020 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-32075007

RESUMEN

ß-Cyclocitral, specifically produced by Microcystis, is one of the volatile organic compounds (VOCs) derived from cyanobacteria and has a lytic activity. It is postulated that ß-cyclocitral is a key compound for regulating the occurrence of cyanobacteria and related microorganisms in an aquatic environment. ß-Cyclocitral is sensitively detected when a high density of the cells is achieved from late summer to autumn. Moreover, it is expected to be involved in changes in the species composition of cyanobacteria in a lake. Although several analysis methods for ß-cyclocitral have already been reported, ß-cyclocitral could be detected using only solid phase micro-extraction (SPME), whereas it could not be found at all using the solvent extraction method in a previous study. In this study, we investigated why ß-cyclocitral was detected using only SPME GC/MS. Particularly, three operations in SPME, i.e., extraction temperature, sample stirring rate, and the effect of salt, were examined for the production of ß-cyclocitral. Among these, heating (60 °C) was critical for the ß-cyclocitral formation. Furthermore, acidification with a 1-h storage was more effective than heating when comparing the obtained amounts. The present results indicated that ß-cyclocitral did not exist as the intact form in cells, because it was formed by heating or acidification of the resulting intermediates during the analysis by SPME. The obtained results would be helpful to understand the formation and role of ß-cyclocitral in an aquatic environment.


Asunto(s)
Aldehídos/aislamiento & purificación , Cianobacterias/aislamiento & purificación , Diterpenos/aislamiento & purificación , Microcystis/aislamiento & purificación , Aldehídos/química , Cianobacterias/química , Cianobacterias/patogenicidad , Diterpenos/química , Cromatografía de Gases y Espectrometría de Masas , Humanos , Lagos/microbiología , Microcystis/química , Microcystis/patogenicidad , Microextracción en Fase Sólida , Compuestos Orgánicos Volátiles/química
3.
Mol Ecol ; 28(17): 3994-4011, 2019 09.
Artículo en Inglés | MEDLINE | ID: mdl-31344288

RESUMEN

Intraspecific niche divergence is an important driver of species range, population abundance and impacts on ecosystem functions. Genetic changes are the primary focus when studying intraspecific divergence; however, the role of ecological interactions, particularly host-microbiome symbioses, is receiving increased attention. The relative importance of these evolutionary and ecological mechanisms has seen only limited evaluation. To address this question, we used Microcystis aeruginosa, the globally distributed cyanobacterium that dominates freshwater harmful algal blooms. These blooms have been increasing in occurrence and intensity worldwide, causing major economic and ecological damages. We evaluated 46 isolates of M. aeruginosa and their microbiomes, collected from 14 lakes in Michigan, USA, that vary over 20-fold in phosphorus levels, the primary limiting nutrient in freshwater systems. Genomes of M. aeruginosa diverged along this phosphorus gradient in genomic architecture and protein functions. Fitness in low-phosphorus lakes corresponded with additional shifts within M. aeruginosa including genome-wide reductions in nitrogen use, an expansion of phosphorus assimilation genes and an alternative life history strategy of nonclonal colony formation. In addition to host shifts, despite culturing in common-garden conditions, host-microbiomes diverged along the gradient in taxonomy, but converged in function with evidence of metabolic interdependence between the host and its microbiome. Divergence corresponded with a physiological trade-off between fitness in low-phosphorus environments and growth rate in phosphorus-rich conditions. Co-occurrence of genotypes adapted to different nutrient environments in phosphorus-rich lakes may have critical implications for understanding how M. aeruginosa blooms persist after initial nutrient depletion. Ultimately, we demonstrate that the intertwined effects of genome evolution, host life history strategy and ecological interactions between a host and its microbiome correspond with an intraspecific niche shift with important implications for whole ecosystem function.


Asunto(s)
Evolución Molecular , Genoma , Floraciones de Algas Nocivas , Microbiota/genética , Microcystis/genética , Variación Genética , Microcystis/crecimiento & desarrollo , Microcystis/aislamiento & purificación , Microcystis/fisiología , Filogenia
4.
Antonie Van Leeuwenhoek ; 111(12): 2425-2440, 2018 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-30069722

RESUMEN

The Carpathian Basin is a lowland plain located mainly in Hungary. Due to the nature of the bedrock, alluvial deposits, and a bowl shape, many lakes and ponds of the area are characterized by high alkalinity. In this study, we characterized temporal changes in eukaryal and bacterial community dynamics with high throughput sequencing and relate the changes to environmental conditions in Lake Velence located in Fejér county, Hungary. The sampled Lake Velence microbial populations (algal and bacterial) were analyzed to identify potential correlations with other community members and environmental parameters at six timepoints over 6 weeks in the Spring of 2012. Correlations between community members suggest a positive relationship between certain algal and bacterial populations (e.g. Chlamydomondaceae with Actinobacteria and Acidobacteria), while other correlations allude to changes in these relationships over time. During the study, high nitrogen availability may have favored non-nitrogen fixing cyanobacteria, such as the toxin-producing Microcystis aeruginosa, and the eutrophic effect may have been exacerbated by high phosphorus availability as well as the high calcium and magnesium content of the Carpathian Basin bedrock, potentially fostering exopolymer production and cell aggregation. Cyanobacterial bloom formation could have a negative environmental impact on other community members and potentially affect overall water quality as well as recreational activities. To our knowledge, this is the first prediction for relationships between photoautotrophic eukaryotes and bacteria from an alkaline, Hungarian lake.


Asunto(s)
Cianobacterias/genética , Eutrofización , Lagos/microbiología , Consorcios Microbianos/genética , Phaeophyceae/genética , Filogenia , Acidobacteria/clasificación , Acidobacteria/genética , Acidobacteria/aislamiento & purificación , Acidobacteria/metabolismo , Actinobacteria/clasificación , Actinobacteria/genética , Actinobacteria/aislamiento & purificación , Actinobacteria/metabolismo , Álcalis/química , Calcio/química , Calcio/metabolismo , Chlorophyceae/clasificación , Chlorophyceae/genética , Chlorophyceae/metabolismo , Cianobacterias/clasificación , Cianobacterias/aislamiento & purificación , Cianobacterias/metabolismo , ADN de Algas/genética , ADN Bacteriano/genética , Hungría , Concentración de Iones de Hidrógeno , Magnesio/química , Magnesio/metabolismo , Microcystis/clasificación , Microcystis/genética , Microcystis/aislamiento & purificación , Microcystis/metabolismo , Nitrógeno/química , Nitrógeno/metabolismo , Phaeophyceae/clasificación , Phaeophyceae/aislamiento & purificación , Phaeophyceae/metabolismo , Fósforo/química , Fósforo/metabolismo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Microbiología del Agua
5.
J Toxicol Environ Health A ; 81(21): 1142-1149, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30430926

RESUMEN

Global proliferation of cyanobacterial blooms associated with climate change and eutrophication constitutes a serious environmental threat. In Hunan Province a freshwater pond located in Changsha City was found to contain high concentrations of cyanobacteria, however, the characteristics of these cyanobacteria at present are not known. This study thus aimed to isolate, identify the most common bloom-forming cyanobacteria in this region and determine the toxigenic characteristics of the predominant cyanobacteria. The cyanobacteria were isolated by serial dilution and identified using polymerase chain reaction (PCR). The cyanotoxins generated by the cyanobacterium were detected using high-performance liquid chromatography with an ultra-high resolution LTQ Orbitrap Velos Pro ETD mass spectrometry equipped with electrospray ionization interface (HPLC-ESI-MS). One  species of cyanobacterium was isolated and identified as Microcystis sp. YFM1 according to the sequence of the 16S ribosome deoxyribonucleic acid (16S rDNA). It was found that this cyanobacterium contained microcystin synthetase B gene (mcyB) and produced three types of cyanotoxins including microcystin-LR, RR and YR. Our findings indicate that the Microcystis sp. YFM1 isolated from the freshwater pond in Hunan Province exhibits unique characteristics distinguishable from other known cyanobacteria.


Asunto(s)
Eutrofización , Microcystis/aislamiento & purificación , Estanques/microbiología , China , Cromatografía Líquida de Alta Presión , Espectrometría de Masas , Microcistinas/análisis , Microcystis/clasificación , Microcystis/genética , Filogenia , ARN Bacteriano/análisis , ARN Ribosómico 16S/análisis
6.
Environ Monit Assess ; 190(12): 712, 2018 Nov 10.
Artículo en Inglés | MEDLINE | ID: mdl-30415457

RESUMEN

To verify the applicability of identifying Microcystis aeruginosa by matrix-assisted laser desorption-ionization-time-of-flight mass spectrometry (MALDI-TOF MS), mixed and field samples were employed to study the sensitivity and the analysis power, respectively. Series diluted samples and artificially mixed samples by the M. aeruginosa NIES-843 strain were designed to verify the sensitivity. The lowest detection limit was 1.955 × 106 cells in pure samples, while for mixed samples, the lowest detection limit and ratio of NIES-843 strain were 2.88 × 106 cells and 33.7%, respectively. The results provided a reference for the reasonable volume of the water sample in which the M. aeruginosa could be detected. Ribosomal protein biomarkers for identifying M. aeruginosa which were successfully detected from the field samples in Taihu Lake, indicated that the identification of M. aeruginosa by MALDI-TOF MS could be applied in field samples. Furthermore, different genetic types of M. aeruginosa strains were also detected at different locations in Taihu Lake, which revealed the diversity of M. aeruginosa and the detection power of MALDI-TOF MS at the strain level for the field samples. The sensitivity and detection power in the analysis of M. aeruginosa by the MALDI-TOF MS demonstrated the applicability of this method in routine environmental monitoring.


Asunto(s)
Monitoreo del Ambiente/métodos , Microcystis/aislamiento & purificación , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos
7.
Environ Microbiol ; 19(9): 3619-3637, 2017 09.
Artículo en Inglés | MEDLINE | ID: mdl-28730710

RESUMEN

Harmful blooms of the cyanobacterium Microcystis sp. have become increasingly pervasive in the San Francisco Estuary Delta (USA) since the early 2000s and their rise has coincided with substantial decreases in several important fish species. Direct and indirect effects Microcystis blooms may have on the Delta food web were investigated. The Microcystis population was tracked for 2 years at six sites throughout the Delta using quantitative PCR. High-throughput amplicon sequencing and colony PCR sequencing revealed the presence of 10 different strains of Microcystis, including 6 different microcystin-producing strains. Shotgun metagenomic analysis identified a variety of Microcystis secondary metabolite pathways, including those for the biosynthesis of: aeruginosin, cyanopeptolin, microginin, microviridin and piricyclamide. A sizable reduction was observed in microbial community diversity during a large Microcystis bloom (H' = 0.61) relative to periods preceding (H' = 2.32) or following (H' = 3.71) the bloom. Physicochemical conditions of the water column were stable throughout the bloom period. The elevated abundance of a cyanomyophage with high similarity to previously sequenced isolates known to infect Microcystis sp. was implicated in the bloom's collapse. Network analysis was employed to elucidate synergistic and antagonistic relationships between Microcystis and other bacteria and indicated that only very few taxa were positively correlated with Microcystis.


Asunto(s)
Floraciones de Algas Nocivas , Microbiota , Microcystis/clasificación , Microcystis/aislamiento & purificación , Animales , Biodiversidad , ADN Bacteriano/genética , Ecología , Estuarios , Peces , Cadena Alimentaria , Microcistinas/biosíntesis , Microcystis/genética , Microcystis/virología , Reacción en Cadena en Tiempo Real de la Polimerasa , San Francisco , Microbiología del Agua
8.
Environ Monit Assess ; 189(1): 39, 2017 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-28025806

RESUMEN

Aguelmam Azizgza (LAZ) and Dayet Afourgah (DAF) are two Moroccan natural lakes located in a humid hydrographic basin of the Middle Atlas Mountains. Both are considered important reservoirs of plant and animal biodiversity. In addition, they are extensively used for recreational and fishing activities and as a water source for irrigation of agricultural crops. Recurrent cyanobacteria scum episodes in the two water bodies have been reported, Microcystis being the main genus in the scums. Here, we report on the toxic potential of three Microcystis aeruginosa strains isolated from those lakes: Mic LAZ and Mic B7 from LAZ and Mic DAF isolated from DAF. The toxic potential was checked by their microcystin (MC) content and the presence of mcy genes involved in MC synthesis. The identification and quantification of MC variants were performed by high-performance liquid chromatography-photo-diode array. The detection of mcy genes was achieved by whole-cell multiplex PCR that allowed the simultaneous amplification of DNA sequences corresponding to specific mcy regions. MC content of cultured cells, as MC-LR equivalents per gram cell biomass, was slightly higher in Mic LAZ (ca. 860) than in Mic B7 (ca. 700) and Mic DAF (ca. 690). Four MC variants were identified in the three isolates: MC-WR, MC-RR, MC-DM-WR, and MC-YR. The presence of toxic Microcystis strains in the two studied lakes may be regarded as an environmental and health hazard, especially during periods of bloom proliferation. It would be recommended the use of two complementary techniques, as those utilized herein (HPLC and mcy detection) to alert on highly probable toxicity of such lakes.


Asunto(s)
Lagos/microbiología , Microcistinas/análisis , Microcystis/aislamiento & purificación , Contaminantes del Agua/análisis , Animales , Biomasa , Cromatografía Líquida de Alta Presión , ADN Bacteriano/química , Microcistinas/química , Microcistinas/genética , Microcystis/genética , Marruecos , Calidad del Agua
9.
Anal Bioanal Chem ; 408(7): 1879-90, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26790870

RESUMEN

Online solid-phase extraction was combined with nano-liquid chromatography coupled to high-resolution mass spectrometry (HRMS) for the analysis of micropollutants in environmental samples from small volumes. The method was validated in surface water, Microcystis aeruginosa cell lysate, and spent Microcystis growth medium. For 41 analytes, quantification limits of 0.1-28 ng/L (surface water) and 0.1-32 ng/L (growth medium) were obtained from only 88 µL of sample. In cell lysate, quantification limits ranged from 0.1-143 ng/L or 0.33-476 ng/g dry weight from a sample of 88 µL, or 26 µg dry weight, respectively. The method matches the sensitivity of established online and offline solid-phase extraction-liquid chromatography-mass spectrometry methods but requires only a fraction of the sample used by those techniques, and is among the first applications of nano-LC-MS for environmental analysis. The method was applied to the determination of bioconcentration in Microcystis aeruginosa in a laboratory experiment, and the benefit of coupling to HRMS was demonstrated in a transformation product screening.


Asunto(s)
Cromatografía Liquida/instrumentación , Monitoreo del Ambiente/instrumentación , Agua Dulce/análisis , Agua Dulce/microbiología , Microcystis/aislamiento & purificación , Extracción en Fase Sólida/instrumentación , Contaminantes Químicos del Agua/aislamiento & purificación , Diseño de Equipo , Límite de Detección , Miniaturización/instrumentación , Tamaño de la Muestra , Espectrometría de Masas en Tándem/instrumentación , Contaminantes Químicos del Agua/análisis
10.
J Appl Microbiol ; 120(1): 138-51, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26497323

RESUMEN

AIMS: Microcystis population and microcystin (MC) dynamics were investigated in western Lake Erie coastal wetlands and downstream beach water. A three-dimensional (3-D) model was developed to quantify how Microcystis population size and structure affect MCs. METHODS AND RESULTS: Real-time PCR, denaturing gradient gel electrophoresis (DGGE) and enzyme-linked immunoabsorbent assay (ELISA) were used. A moderate-low level of Microcystis abundance and MCs were detected with a significant increase along the wetland flow and the spatiotemporal homogeneity of Microcystis populations. The proportion of toxigenic and nontoxgenic genotypes appeared to be more affected by the variation in two major Microcystis PC-IGS genotypes. MC dynamics was associated with the changing Microcystis population size and structure. The 3-D model showed that Microcystis population with greater Microcystis PC-IGS abundance (and simultaneously higher diversity) had more MCs. CONCLUSION: Microcystin variation was significantly affected by Microcystis population size and structure. The 3-D model also revealed the relative importance of Microcystis population size and structure in determining MCs in the Lake Erie costal wetland and downstream beach water. SIGNIFICANCE AND IMPACT OF THE STUDY: This study enriches our understanding of Microcystis population and microcystin ecology in a western Lake Erie coastal wetland and downstream beach water. Our illustrative model brings a new perspective for understanding the ecological relationship between Microcystis population size and structure and MCs.


Asunto(s)
Biodiversidad , Lagos/microbiología , Microcistinas/biosíntesis , Microcystis/aislamiento & purificación , Microcystis/metabolismo , Genotipo , Microcystis/genética , Datos de Secuencia Molecular , Filogenia , Reacción en Cadena en Tiempo Real de la Polimerasa , Humedales
11.
Lett Appl Microbiol ; 63(5): 376-383, 2016 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-27538762

RESUMEN

Cyanobacteria are ubiquitous micro-organisms that can produce toxic compounds, the cyanotoxins. The monitoring of such producers in the environment is of prime importance for human health. An attractive technology for such monitoring is fluorescence in situ hybridization (FISH), which allows the detection and enumeration of environmental micro-organisms. We present here the application of tyramide signal amplification fluorescence in situ hybridization (TSA-FISH) to the detection of microcystin-producing Microcystis strains. We used a 16S rRNA-specific probe, MICR3, to specifically label and observe by epifluorescence microscopy Microcystis aeruginosa strains. Using confocal laser scanning microscopy and a specific probe, MCYA, targeting the mcyA mRNA we have labelled M. aeruginosa PCC 7806, which produces microcystins. Microcystis aeruginosa PCC 7005 which does not produce microcystins is not labelled by this probe. Furthermore, we show here that this specific mRNA labelling in M. aeruginosa PCC 7806 is enhanced in cells illuminated for 1 h just after a dark period of cultivation of 24 h, conditions in which the mcyA gene is up regulated. The data presented here might be applicable to the monitoring of toxic Microcystis strains in the environment. SIGNIFICANCE AND IMPACT OF THE STUDY: Cyanobacteria producing toxic compounds (cyanotoxins) are present in the environment and in water bodies. Their presence poses a threat on human and animal health. It is thus important to detect, identify and enumerate these toxic Cyanobacteria. Using tyramide signal amplification fluorescence in situ hybridization (TSA-FISH) and specific probes, with confocal laser scanning microscopy, we have specifically detected Microcystis strains producing microcystin toxins. The data presented here might be applied to the monitoring of water bodies at early stages and all along the formation of Microcystis blooms.


Asunto(s)
Toxinas Bacterianas/genética , Monitoreo del Ambiente/métodos , Hibridación Fluorescente in Situ/métodos , Microcistinas/genética , Microcystis/aislamiento & purificación , ARN Mensajero/análisis , Animales , Humanos , Microcystis/clasificación , Microcystis/genética , Microscopía Confocal , ARN Ribosómico , ARN Ribosómico 16S/genética
12.
World J Microbiol Biotechnol ; 32(7): 118, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27263013

RESUMEN

Cyanobacteria are microorganisms that pose a serious threat to the aquatic waterways through the production of dense blooms under eutrophic conditions and the release of toxic secondary metabolites-cyanotoxins. Within cyanobacteria, the colonial planktonic Microcystis aeruginosa is widely distributed in both fresh and brackish aquatic environments throughout the world being frequently observed in the Portuguese water systems. Apart from the well-established distribution of M. aeruginosa in Portugal, knowledge of its genetic diversity and population structure is unknown. Therefore, in this study twenty-seven strains were obtained from the North, Centre and South regions of Portugal and were subjected to extensive phylogenetic analyses using simultaneously four distinct genetic markers (16S rRNA, 16S-23S ITS, DNA gyrase subunit ß and cell division protein (ftsZ)) encompassing in total 2834 bp. With this work we characterized the phylogenetic relationship among the Portuguese strains, with the southern strains showing higher genetic structure relatively to the North and Centre strains. A total of fifteen genotypes were determined for M. aeruginosa in Portuguese water systems revealing a high genetic diversity. This is also the first study to report geographic variation on the population structure of the Portuguese M. aeruginosa.


Asunto(s)
Agua Dulce/microbiología , Microcystis/genética , Microcystis/aislamiento & purificación , Abastecimiento de Agua , Proteínas Bacterianas/genética , Proteínas del Citoesqueleto/genética , Girasa de ADN/genética , ADN Bacteriano/genética , ADN Ribosómico/genética , ADN Espaciador Ribosómico/genética , Microcystis/clasificación , Filogenia , Filogeografía , Portugal , ARN Ribosómico 16S/genética , ARN Ribosómico 23S/genética , Recombinación Genética , Análisis de Secuencia de ADN
13.
Bull Environ Contam Toxicol ; 96(6): 791-6, 2016 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-26846314

RESUMEN

Cyanobacterial/Harmful Algal Blooms are a major issue for lakes and reservoirs throughout the U.S.A. An effective destructive technology could be useful to protect sensitive areas, such as areas near water intakes. The study presented in this article explored the use of a reactor called the KRIA Water Treatment System. The reactor focuses on the injection of superoxide (O2 (-)), which is generated electrochemically from the atmosphere, into the water body. In addition, the injection process generates a significant amount of cavitation. The treatment process was tested in 190-L reactors spiked with water from cyanobacterial contaminated lakes. The treatment was very effective at destroying the predominant species of cyanobacteria, Microcystis aeruginosa, organic matter, and decreasing chlorophyll concentration. Microcystin toxin concentrations were also reduced. Data suggest that cavitation alone was an effective treatment, but the addition of superoxide improved performance, particularly regarding removal of cyanobacteria and reduction of microcystin concentration.


Asunto(s)
Cianobacterias/aislamiento & purificación , Microcystis/aislamiento & purificación , Superóxidos/química , Purificación del Agua , Clorofila/análisis , Floraciones de Algas Nocivas , Lagos/química , Lagos/microbiología , Microcistinas/análisis
14.
Appl Environ Microbiol ; 81(15): 5203-11, 2015 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-26025892

RESUMEN

The increasing occurrence of harmful cyanobacterial blooms, often linked to deteriorated water quality and adverse public health effects, has become a worldwide concern in recent decades. The use of molecular techniques such as real-time quantitative PCR (qPCR) has become increasingly popular in the detection and monitoring of harmful cyanobacterial species. Multiplex qPCR assays that quantify several toxigenic cyanobacterial species have been established previously; however, there is no molecular assay that detects several bloom-forming species simultaneously. Microcystis and Cylindrospermopsis are the two most commonly found genera and are known to be able to produce microcystin and cylindrospermopsin hepatotoxins. In this study, we designed primers and probes which enable quantification of these genera based on the RNA polymerase C1 gene for Cylindrospermopsis species and the c-phycocyanin beta subunit-like gene for Microcystis species. Duplex assays were developed for two molecular techniques-qPCR and droplet digital PCR (ddPCR). After optimization, both qPCR and ddPCR assays have high linearity and quantitative correlations for standards. Comparisons of the two techniques showed that qPCR has higher sensitivity, a wider linear dynamic range, and shorter analysis time and that it was more cost-effective, making it a suitable method for initial screening. However, the ddPCR approach has lower variability and was able to handle the PCR inhibition and competitive effects found in duplex assays, thus providing more precise and accurate analysis for bloom samples.


Asunto(s)
Cylindrospermopsis/clasificación , Cylindrospermopsis/genética , Técnicas Microbiológicas/métodos , Microcystis/clasificación , Microcystis/genética , Reacción en Cadena de la Polimerasa Multiplex/métodos , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Análisis Costo-Beneficio , Cylindrospermopsis/aislamiento & purificación , Cartilla de ADN/genética , Técnicas Microbiológicas/economía , Microcystis/aislamiento & purificación , Reacción en Cadena de la Polimerasa Multiplex/economía , Sondas de Oligonucleótidos/genética , Reacción en Cadena en Tiempo Real de la Polimerasa/economía , Sensibilidad y Especificidad
15.
Mar Drugs ; 13(4): 2347-75, 2015 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-25884445

RESUMEN

Thirteen new and eighteen known natural products were isolated from a bloom material of an assembly of various Microcystis spp. collected in November, 2008, from a commercial fishpond near Kibbutz Kfar Blum, the Jordan Valley, Israel. The new natural products included the prenylated aeruginosin KB676 (1), microphycin KB921 (2), anabaenopeptins KB906 (3) and KB899 (4) and micropeptins KB928 (5), KB956 (6), KB970A (7), KB970B (8), KB984 (9), KB970C (10), KB1048 (11), KB992 (12) and KB1046 (13). Their structures were elucidated primarily by interpretation of their 1D and 2D nuclear magnetic resonance spectra and high-resolution mass spectrometry. Marfey's and chiral-phase high performance liquid chromatography methods were used to determine the absolute configurations of their chiral centers. Aeruginosin KB676 (1) contains the rare (2S,3aS,6S,7aS)-Choi and is the first prenylated aeruginosin derivative described in the literature. Compounds 1 and 5-11 inhibited trypsin with sub-µM IC50s, while Compounds 11-13 inhibited chymotrypsin with sub-µM IC50s. The structures and biological activities of the new natural products and our procedures of dereplication are described.


Asunto(s)
Bacteriocinas/aislamiento & purificación , Depsipéptidos/aislamiento & purificación , Dipéptidos/aislamiento & purificación , Guanidinas/aislamiento & purificación , Floraciones de Algas Nocivas , Toxinas Marinas/aislamiento & purificación , Microcystis/química , Oligopéptidos/aislamiento & purificación , Péptidos Cíclicos/aislamiento & purificación , Urea/análogos & derivados , Acuicultura , Bacteriocinas/química , Bacteriocinas/farmacología , Cromatografía Líquida de Alta Presión , Quimotripsina/antagonistas & inhibidores , Quimotripsina/metabolismo , Depsipéptidos/química , Depsipéptidos/farmacología , Dipéptidos/química , Dipéptidos/farmacología , Guanidinas/química , Guanidinas/farmacología , Israel , Toxinas Marinas/química , Toxinas Marinas/farmacología , Microcystis/crecimiento & desarrollo , Microcystis/aislamiento & purificación , Estructura Molecular , Resonancia Magnética Nuclear Biomolecular , Oligopéptidos/química , Oligopéptidos/farmacología , Péptidos Cíclicos/química , Péptidos Cíclicos/farmacología , Estanques/microbiología , Prenilación de Proteína , Inhibidores de Serina Proteinasa/química , Inhibidores de Serina Proteinasa/aislamiento & purificación , Inhibidores de Serina Proteinasa/farmacología , Espectrometría de Masa por Ionización de Electrospray , Estereoisomerismo , Espectrometría de Masas en Tándem , Inhibidores de Tripsina/química , Inhibidores de Tripsina/aislamiento & purificación , Inhibidores de Tripsina/farmacología , Urea/química , Urea/aislamiento & purificación , Urea/farmacología
16.
Ecotoxicol Environ Saf ; 115: 67-74, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25682583

RESUMEN

On the basis of relative abundance, frequency and biovolume, the important value index ranks were assigned to individual cyanobacteria in phytoplankton samples collected from fourteen water resources of Central India. The mcyABDE genes were detected in all the blooms with Microcystis (-aeruginosa, -viridis, -panniformis, -botrys) as being the major constituent morphospecies. On the other hand, blooms composed of primarily Oscillatoria (-limosa,-agardhii, -laetevirens) along with Anabaena, Nostoc, Phormidium and Spirulina as sub-dominant forms exhibited quite a patchy distribution of one or the other mcy genes. Fifty percent of Microcystis- but none of the Oscillatoria dominant blooms produced microcystins-RR and desmethyl-RR at 0.03-0.41mgg(-1) bloom dry mass. Traces of dissolved microcystin was detected in lake water, which is well below the WHO guideline. Irrespective of cyanobacterial composition and microcystin production ability, during the study period 43-64% of the cyanobacterial bloom samples exhibited association of viable but nonculturable forms of Vibrio cholerae O1 and O139, as evident from amplification of the antigen genes. We believe that spread of endemic cholera is the major threat associated with harmful algal blooms.


Asunto(s)
Cianobacterias/metabolismo , Floraciones de Algas Nocivas , Microcistinas/biosíntesis , Vibrio cholerae/aislamiento & purificación , Anabaena/genética , Anabaena/aislamiento & purificación , Cianobacterias/genética , Cianobacterias/aislamiento & purificación , India , Lagos/microbiología , Toxinas Marinas , Microcistinas/genética , Microcystis/genética , Microcystis/aislamiento & purificación , Fitoplancton/aislamiento & purificación
17.
Ecotoxicol Environ Saf ; 120: 256-62, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-26093107

RESUMEN

The increasing use of algal-impacted source waters is increasing concerns over exposure to disinfection byproducts (DBPs) in drinking water disinfection, due to the higher concentrations of DBP precursors in these waters. The impact of pre-ozonation on the formation and speciation of DBPs during subsequent chlorination and chloramination of algal organic matter (AOM), including extracellular organic matter (EOM) and intracellular organic matter (IOM), was investigated. During subsequent chlorination, ozonation pretreatment reduced the formation of haloacetonitriles from EOM, but increased the yields of trihalomethanes, dihaloacetic acid and trichloronitromethane from both EOM and IOM. While in chloramination, pre-ozonation remarkably enhanced the yields of several carbonaceous DBPs from IOM, and significantly minimized the nitrogenous DBP precursors. Also, the yield of 1,1-dichloro-2-propanone from IOM was decreased by 24.0% after pre-ozonation during chloramination. Both increases and decreases in the bromine substitution factors (BSF) of AOM were observed with ozone pretreatment at the low bromide level (50µg/L). However, pre-ozonation played little impact on the bromide substitution in DBPs at the high bromide level (500µg/L). This information was used to guide the design and practical operation of pre-ozonation in drinking water treatment plants using algae-rich waters.


Asunto(s)
Desinfectantes/química , Halogenación , Microcystis/aislamiento & purificación , Ozono/química , Contaminantes Químicos del Agua/química , Bromuros/química , Bromo/química , Agua Potable/química , Hidrocarburos Clorados/química , Trihalometanos/química , Purificación del Agua/métodos
18.
Ecotoxicol Environ Saf ; 114: 318-25, 2015 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-25060409

RESUMEN

The increasing frequency of harmful cyanobacterial blooms in freshwater systems is a commonly recognized problem due to detrimental effects on water quality. Vancouver Lake, a shallow, tidally influenced lake in the flood plain of the Columbia River within the city of Vancouver, WA, USA, has experienced numerous summertime cyanobacterial blooms, dominated by Aphanizomenon sp. and Anabaena sp. Cyanobacteria abundance and toxin (microcystin) levels have been monitored in this popular urban lake for several years; however, no previous studies have identified which cyanobacteria species produce toxins, nor analyzed how changes in environmental variables contribute to the fluctuations in toxic cyanobacteria populations. We used a suite of molecular techniques to analyze water samples from Vancouver Lake over two summer bloom cycles (2009 and 2010). Both intracellular and extracellular microcystin concentrations were measured using an ELISA kit. Intracellular microcystin concentrations exceeded WHO guidelines for recreational waters several times throughout the sampling period. PCR results demonstrated that Microcystis sp. was the sole microcystin-producing cyanobacteria species present in Vancouver Lake, although Microcystis sp. was rarely detected in microscopical counts. qPCR results indicated that the majority of the Microcystis sp. population contained the toxin-producing gene (mcyE), although Microcystis sp. abundance rarely exceeded 1 percent of overall cyanobacteria abundance. Non-metric multidimensional scaling (NMDS) revealed that PO4-P was the main environmental variable influencing the abundance of toxic and non-toxic cyanobacteria, as well as intracellular microcystin concentrations. Our study underscores the importance of using molecular genetic techniques, in addition to traditional microscopy, to assess the importance of less conspicuous species in the dynamics of harmful algal blooms.


Asunto(s)
Toxinas Bacterianas/biosíntesis , Cianobacterias/aislamiento & purificación , Cianobacterias/metabolismo , Floraciones de Algas Nocivas , Lagos/microbiología , Microcistinas/biosíntesis , Anabaena/aislamiento & purificación , Cianobacterias/genética , Microcystis/aislamiento & purificación , Microcystis/metabolismo , Estaciones del Año
19.
Ecotoxicol Environ Saf ; 120: 428-35, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-26141781

RESUMEN

Microcystin release following Microcystis aeruginosa cell lysis after copper-based algaecide treatment is often cited as a concern leading to restricted use of algaecide in restoration of natural water resources. To examine this concern, bench-scale experiments were conducted to study responses of M. aeruginosa to 8-day copper exposures as copper sulfate and copper-ethanolamine (Cu-EA). M. aeruginosa UTEX 2385 was cultured in BG11 medium to cell density of 10(6)cells/mL with total and extracellular microcystin of 93 and 53µg/L, respectively. Exposures of copper concentration ranged from 40 to 1000µgCu/L. Cell membrane integrity was indicated by erythrosine B. In the end of experiment, total microcystin and cell density in untreated control (313µg/L and 10(7)cells/mL) was 3.3 and 10 times greater than pretreatment value, respectively. Minimum amount of copper required to reduce M. aeruginosa population within 8 days was 160µgCu/L as copper sulfate and 80µgCu/L as Cu-EA, where total and extracellular microcystin concentrations (47 and 44µg/L for copper sulfate; 56 and 44µg/L for Cu-EA) were degraded with degradation rate coefficient 0.1 day(-1) and were less than pretreatment values. Given a copper concentration at 80µgCu/L as Cu-EA, M. aeruginosa cells were intact and less microcystin were released compared to treatments at 160-1000µgCu/L, where lysed cells and relatively greater microcystin release were observed. Based on the laboratory results, a minimum amount of copper required for reducing M. aeruginosa population could decrease total microcystin concentration and not compromise cells and minimize microcystin release.


Asunto(s)
Sulfato de Cobre/toxicidad , Cobre/toxicidad , Etanolaminas/toxicidad , Microcistinas/biosíntesis , Microcystis/efectos de los fármacos , Microcystis/aislamiento & purificación , Compuestos Organometálicos/toxicidad , Recuento de Colonia Microbiana , Cobre/análisis , Sulfato de Cobre/análisis , Medios de Cultivo , Relación Dosis-Respuesta a Droga , Etanolaminas/análisis , Pruebas de Sensibilidad Microbiana , Microcystis/metabolismo , Compuestos Organometálicos/análisis
20.
Sensors (Basel) ; 15(9): 22737-49, 2015 Sep 09.
Artículo en Inglés | MEDLINE | ID: mdl-26371004

RESUMEN

In this present study, ionic liquid (1-butyl-3-methylimidazolium hexafluorophosphate (IL)) modified pencil graphite electrode (IL-PGEs) was developed for electrochemical monitoring of DNA hybridization related to Microcystis spp. (MYC). The characterization of IL-PGEs was performed using microscopic and electrochemical techniques. DNA hybridization related to MYC was then explored at the surface of IL-PGEs using differential pulse voltammetry (DPV) technique. After the experimental parameters were optimized, the sequence-selective DNA hybridization related to MYC was performed in the case of hybridization between MYC probe and its complementary DNA target, noncomplementary (NC) or mismatched DNA sequence (MM), or and in the presence of mixture of DNA target: NC (1:1) and DNA target: MM (1:1).


Asunto(s)
ADN Bacteriano/análisis , Técnicas Electroquímicas/instrumentación , Grafito/química , Microcystis/genética , Hibridación de Ácido Nucleico/métodos , ADN Bacteriano/genética , Electrodos , Ácidos Nucleicos Inmovilizados/química , Microcystis/aislamiento & purificación
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