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1.
Arch Microbiol ; 206(6): 245, 2024 May 03.
Artículo en Inglés | MEDLINE | ID: mdl-38702537

RESUMEN

Production of carotenoids by yeast fermentation is an advantaged technology due to its easy scaling and safety. Nevertheless, carotenoid production needs an economic culture medium and other efficient yeast stains. The study aims to isolate and identify a yeast strain capable of producing carotenoids using a cost-effective substrate. A new strain was identified as Rhodotorula toruloides L/24-26-1, which can produce carotenoids at different pretreated and unpretreated sugarcane molasses concentrations (40 and 80 g/L). The highest biomass concentration (18.6 ± 0.6 g/L) was reached in the culture using 80 g/L of hydrolyzed molasses. On the other hand, the carotenoid accumulation reached the maximum value using pretreated molasses at 40 g/L (715.4 ± 15.1 µg/g d.w). In this case, the ß-carotene was 1.5 times higher than that on the control medium. The yeast growth in molasses was not correlated with carotenoid production. The most outstanding production of The DPPH, ABTS, and FRAP tests demonstrated the antioxidant activity of the obtained carotenogenic extracts. This research demonstrated the R. toruloides L/24-26-1 strain biotechnological potential for carotenoid compounds. The yeast produces carotenoids with antioxidant activity in an inexpensive medium, such as sulfuric acid pretreated and unpretreated molasses.


Asunto(s)
Fermentación , Melaza , Rhodotorula , Saccharum , beta Caroteno , Rhodotorula/metabolismo , Rhodotorula/genética , Rhodotorula/crecimiento & desarrollo , Rhodotorula/aislamiento & purificación , Rhodotorula/clasificación , Saccharum/metabolismo , beta Caroteno/metabolismo , beta Caroteno/biosíntesis , Carotenoides/metabolismo , Antioxidantes/metabolismo , Biomasa , Medios de Cultivo/química , Filogenia
2.
World J Microbiol Biotechnol ; 38(3): 46, 2022 Jan 27.
Artículo en Inglés | MEDLINE | ID: mdl-35083575

RESUMEN

Biodiesel generated by transesterification of triglycerides from renewable sources is a clean form of energy that is currently used in many countries in blends with petrodiesel. It is mainly produced from food-grade vegetable oils obtained from oleaginous crops. High prices of these oils have made the sustainability of biodiesel production questionable. The use of nonedible feedstocks, such as intracellular triglycerides accumulated by oleaginous yeasts, appears as a feasible alternative. However, it has been demonstrated that an economically sustainable production of yeast oil could only be possible if low-cost media based on industrial subproducts, or wastes are used. In this work, we propose intracellular lipids production by a previously selected oleaginous yeast strain in a medium composed only by sugar cane vinasse and crude glycerol. Different culture strategies were studied. The highest biomass and lipid yields were obtained when the yeast R. graminis S1/2R was cultivated in batch without control of dissolved oxygen. The fatty acid methyl esters obtained under these conditions met the specification of international biodiesel standards.


Asunto(s)
Biocombustibles , Ácidos Grasos/metabolismo , Residuos Industriales , Aceites/metabolismo , Rhodotorula/metabolismo , Agricultura , Medios de Cultivo , Ácidos Grasos/química , Aceites/química , Rhodotorula/clasificación , Saccharum
3.
Lett Appl Microbiol ; 72(4): 399-407, 2021 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-33217003

RESUMEN

A strain NQ1, which showed efficient asymmetric reduction of 3,5-bis(trifluoromethyl) acetophenone (BTAP) to enantiopure (S)-[3,5-bis(trifluoromethyl)phenyl]ethanol ((S)-BTPE), which is the key intermediate for the synthesis of a receptor antagonist and antidepressant, was isolated from a soil sample. Based on its morphological and internal transcribed spacer sequence, the strain NQ1 was identified to be Rhodotorula mucilaginosa NQ1. Some key reaction parameters involved in the bioreduction catalyzed by whole cells of R. mucilaginosa NQ1 were subsequently optimized, and the optimized conditions for the synthesis of (S)-BTPE were determined to be as follows: 5·0 ml phosphate buffer (200 mmol l-1 , pH 7·0), 80 mmol l-1 of BTAP, 250 g (wet weight) l-1 of resting cell, 35 g l-1 of glucose and a reaction for 18 h at 30°C and 180 rev min-1 . The strain NQ1 exhibited a best yield of 99% and an excellent enantiomeric excess of 99% for the preparation of (S)-BTPE under the above optimal conditions, and could also asymmetrically reduce a variety of bulky prochiral carbonyl compounds to their corresponding optical hydroxyl compound with excellent enantioselectivity. These results indicated that R. mucilaginosa NQ1 had a good capacity to reduce BTAP to its corresponding (S)-BTPE, and might be a new potential biocatalyst for the production of valuable chiral hydroxyl compounds in industry.


Asunto(s)
Aprepitant/metabolismo , Reactores Biológicos/microbiología , Rhodotorula/clasificación , Rhodotorula/metabolismo , Acetofenonas/química , Oxidación-Reducción , Alcohol Feniletílico/química , Rhodotorula/aislamiento & purificación
4.
World J Microbiol Biotechnol ; 37(1): 18, 2021 Jan 04.
Artículo en Inglés | MEDLINE | ID: mdl-33394175

RESUMEN

One of the very promising methods in the field of bioremediation of hydrocarbons is the application of biosurfactant- producing microorganisms based on the use of wastewater as renewable substrates of culture media, contributing to the reduction of costs. With this aim, the production, characterization and properties of the yeast strain YBR producing a biosurfactant newly isolated from an oilfield in Algeria, using wastewater from olive oil mills (OOMW) as a substrate for a low-cost and effective production, have been investigated. Screening of biosurfactant production was carried out with different tests, including emulsification index test (E24), drop collapse test, oil spreading technique and measurement of surface tension (ST). The isolated yeast strain was found to be a potent biosurfactant producer with E24 = 69% and a significant reduction in ST from 72 to 35 mN m-1. The study of the cultural, biochemical, physiological and genetic characteristics of the isolate allowed us to identify it as Rhodotorula sp. strain YBR. Fermentation was carried out in a 2.5 L Minifors Bioreactor using crude OOMW as culture medium, the E24 value reached 90% and a reduction of 72 to 35 mN m-1 in ST. A biosurfactant yield = 10.08 ± 0.38 g L-1 was recorded. The characterization by semi-purification and thin layer chromatography (TLC) of the crude extract of biosurfactant showed the presence of peptides, carbohydrates and lipids in its structure. The crude biosurfactant exhibited interesting properties such as: low critical micellar concentration (CMC), significant reduction in ST and strong emulsifying activity. In addition, it has shown stability over a wide range of pH (2-12), temperature (4-100 °C) and salinity (1-10%). More interestingly, the produced biosurfactant has proven to be of great potential application in the remobilization of hydrocarbons from polluted soil with a removal rate of greater than 95%.


Asunto(s)
Hidrocarburos/química , Petróleo/microbiología , Rhodotorula/crecimiento & desarrollo , Tensoactivos/metabolismo , Biodegradación Ambiental , Reactores Biológicos/microbiología , Yacimiento de Petróleo y Gas , Filogenia , Rhodotorula/clasificación , Rhodotorula/aislamiento & purificación , Rhodotorula/metabolismo
5.
Mol Biol Rep ; 47(11): 8903-8909, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-33130966

RESUMEN

Luliconazole is an imidazole antifungal agent used in topical form for the treatment of onychomycosis and dermatophytosis. In vitro activity of luliconazole against dermatophytes, Candida, black fungi, Fusarium and Aspergillus species have been investigated. Rhodotorula spp. are environmental yeasts and emerged as opportunistic pathogens among immunocompromised patients. Rhodotorula's human infections are usually resistant to treatment with antifungal drugs especially triazoles and echinocandins. The present study aimed at the molecular detection of environmental isolates of Rhodotorula spp. Then, antifungal efficacy of luliconazole was evaluated against isolates and compared to other routine systemic antifungals including; caspofungin, posaconazole, fluconazole, itraconazole, amphotericin B, and voriconazole. The biofilm production of Rhodotorula isolates was also evaluated. In this study, 39 isolates of Rhodotorula spp. were isolated from the environment, detected using molecular methods, and tested against luliconazole. Then, the anti-fungal activity of luliconazole compared with several routine antifungals. Also, biofilm formation by using a crystal violet staining assay was performed. Our finding showed that luliconazole has a very high minimum inhibitory concentration (MIC) value (1-8 µg/ml) against Rhodotorula spp. Besides, 100% of Rhodotorula strains were resistant to caspofungin, followed by fluconazole 94.7% and voriconazole 74.4%. Amphotericin B was demonstrated excellent in vitro activity against this genus. Our result indicated that 59% of Rhodotorula spp. were in the mid-range of biofilm production. Our results indicated that luliconazole does not effective against the genus Rhodotorula. Furthermore, amphotericin B is the best drug against this genus in comparison to caspofungin and other azole drugs.


Asunto(s)
Biopelículas/efectos de los fármacos , Imidazoles/farmacología , Pruebas de Sensibilidad Microbiana/métodos , Rhodotorula/efectos de los fármacos , Anfotericina B/farmacología , Antifúngicos/farmacología , Biopelículas/crecimiento & desarrollo , Caspofungina/farmacología , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Fluconazol/farmacología , Humanos , Itraconazol/farmacología , Filogenia , Rhodotorula/clasificación , Rhodotorula/fisiología , Especificidad de la Especie , Triazoles/farmacología , Voriconazol/farmacología
6.
Arch Microbiol ; 201(3): 399-407, 2019 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-30719527

RESUMEN

During this study, we characterized the seasonality's impact and environmental conditions on the yeast diversity from raw camel's milk collected in Algeria. The yeast counts were estimated to 3.55 × 102 CFU mL-1, with a maximum of 6.3 × 102 CFU mL-1. The yeasts were categorized phenotypically by API 20C AUX, MALDI-TOF and genetically by sequencing 26S rDNA and ITS1-5.8S-ITS2. The rDNA sequencing approaches revealed 12 species including unusual ones such as Trichosporon asahii, Pichia fermentans, Millerozyma farinosa, Pichia galeiformis, Candida tartarivorans and Pichia manshurica. The most dominant species were T. asahii (23%), P. fermentans (19%) and Rhodotorula mucilaginosa (14%). The high occurrence and large diversity were registered in samples collected during the autumn season, in the semi-arid and arid highlands regions with 0.66 × 103 CFU mL-1 and 0.51 × 103 CFU mL-1, respectively. Interestingly, T. asahii, R. mucilaginosa, P. fermentans, C. parapsilosis and C. zeylanoides were detected during both spring and autumn.


Asunto(s)
Camelus/microbiología , Candida/aislamiento & purificación , Leche/microbiología , Pichia/aislamiento & purificación , Rhodotorula/aislamiento & purificación , Saccharomyces cerevisiae/aislamiento & purificación , Levaduras/aislamiento & purificación , Argelia , Animales , Candida/clasificación , Candida/genética , ADN de Hongos/genética , ADN Ribosómico/genética , Pichia/clasificación , Pichia/genética , Rhodotorula/clasificación , Rhodotorula/genética , Saccharomyces cerevisiae/clasificación , Saccharomyces cerevisiae/genética , Estaciones del Año , Levaduras/clasificación , Levaduras/genética
7.
Mycopathologia ; 183(3): 637-644, 2018 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-29196923

RESUMEN

This report describes the isolation of two environmental fungi: Rhodotorula mucilaginosa and Trichosporon jirovecii accompanied by Pseudomonas aeruginosa and Escherichia coli from a dog with bronchotracheitis. All microorganisms were isolated routinely from a mucopurulent discharge, obtained during bronchoscopy from laryngotracheal area. The initial identification of yeasts was confirmed by API Candida and by molecular analysis of internal transcribed spacer region. Administered antimicrobial treatment with Marbofloxacin and Canizol has brought the improvement in the dogs' health status. The final results of control mycological culture were negative. Most probably underlying hypothyroidism and the use of steroids were the factors predisposing this patient to opportunistic infection of mixed aetiology. As far as we are concerned, this is the first case of dogs' respiratory tract infection caused by R. mucilaginosa and T. jirovecii.


Asunto(s)
Coinfección/veterinaria , Enfermedades de los Perros/diagnóstico , Escherichia coli/aislamiento & purificación , Pseudomonas aeruginosa/aislamiento & purificación , Infecciones del Sistema Respiratorio/veterinaria , Rhodotorula/aislamiento & purificación , Trichosporon/aislamiento & purificación , Animales , Antibacterianos/administración & dosificación , Antifúngicos/administración & dosificación , Broncoscopía , Análisis por Conglomerados , Coinfección/diagnóstico , Coinfección/microbiología , Coinfección/patología , ADN Bacteriano/química , ADN Bacteriano/genética , ADN de Hongos/química , ADN de Hongos/genética , ADN Espaciador Ribosómico/química , ADN Espaciador Ribosómico/genética , Enfermedades de los Perros/microbiología , Enfermedades de los Perros/patología , Perros , Escherichia coli/clasificación , Escherichia coli/genética , Femenino , Técnicas Microbiológicas , Filogenia , Pseudomonas aeruginosa/clasificación , Pseudomonas aeruginosa/genética , Infecciones del Sistema Respiratorio/diagnóstico , Infecciones del Sistema Respiratorio/microbiología , Infecciones del Sistema Respiratorio/patología , Rhodotorula/clasificación , Rhodotorula/genética , Análisis de Secuencia de ADN , Resultado del Tratamiento , Trichosporon/clasificación , Trichosporon/genética
8.
J Basic Microbiol ; 58(4): 331-342, 2018 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-29442377

RESUMEN

Psychrotolerant yeast Rhodotorula sp. Y-23 was isolated from the sediment core sub-samples of Nella Lake, East Antarctica. Isolate was screened for lipase production using plate assay method followed by submerged fermentation. Production optimization revealed the maximum lipase production by using palmolein oil (5% v/v), pH 8.0 and inoculum size of 2.5% v/v at 15 °C. The potential inducers for lipase were 1% w/v of galactose and KNO3 , and MnCl2 (0.1% w/v). Final productions with optimized conditions gave 5.47-fold increase in lipase production. Dialyzed product gave a purification fold of 5.63 with specific activity of 26.83 U mg-1 and 15.67% yields. This lipase was more stable at pH 5.0 and -20 °C whereas more activity was found at pH 8.0 and 35 °C. Stability was more in 50 mM Fe3+ , EDTA-Na (20 mM), sodium deoxycholate (20 mM), H2 O2 (1% v/v), and almost all organic solvents (50% v/v). Tolerance capacity at wider range of pH and temperature with having lower Km value i.e., 0.08 mg ml-1 and higher Vmax 385.68 U mg-1 at 15 °C make the studied lipase useful for industrial applications. Besides this, the lipase was compatible with commercially available detergents, and its addition to them increases lipid degradation performances making it a potential candidate in detergent formulation.


Asunto(s)
Frío , Proteínas Fúngicas/metabolismo , Sedimentos Geológicos/microbiología , Lipasa/metabolismo , Rhodotorula/enzimología , Solventes/farmacología , Regiones Antárticas , Detergentes/química , Estabilidad de Enzimas/efectos de los fármacos , Proteínas Fúngicas/biosíntesis , Proteínas Fúngicas/aislamiento & purificación , Proteínas Fúngicas/fisiología , Concentración de Iones de Hidrógeno , Cinética , Lipasa/biosíntesis , Lipasa/aislamiento & purificación , Lipasa/fisiología , Aceites de Plantas/metabolismo , Rhodotorula/clasificación , Rhodotorula/genética , Rhodotorula/aislamiento & purificación , Especificidad por Sustrato , Temperatura
9.
World J Microbiol Biotechnol ; 34(9): 127, 2018 Aug 06.
Artículo en Inglés | MEDLINE | ID: mdl-30084085

RESUMEN

Silver nanoparticles (AgNPs) have several technological applications and may be synthetized by chemical, physical and biological methods. Biosynthesis using fungi has a wide enzymatic range and it is easy to handle. However, there are few reports of yeasts with biosynthetic ability to produce stable AgNPs. The purpose of this study was to isolate and identify soil yeasts (Rhodotorula glutinis and Rhodotorula mucilaginosa). After this step, the yeasts were used to obtain AgNPs with catalytic and antifungal activity evaluation. Silver Nanoparticles were characterized by UV-Vis, DLS, FTIR, XRD, EDX, SEM, TEM and AFM. The AgNPs produced by R. glutinis and R. mucilaginosa have 15.45 ± 7.94 nm and 13.70 ± 8.21 nm (average ± SD), respectively, when analyzed by TEM. AgNPs showed high catalytic capacity in the degradation of 4-nitrophenol and methylene blue. In addition, AgNPs showed high antifungal activity against Candida parapsilosis and increase the activity of fluconazole (42.2% for R. glutinis and 29.7% for R. mucilaginosa), while the cytotoxicity of AgNPs was only observed at high concentrations. Finally, two yeasts with the ability to produce AgNPs were described and these particles showed multifunctionality and can represent a technological alternative in many different areas with potential applications.


Asunto(s)
Antifúngicos/farmacología , Nanopartículas del Metal/química , Rhodotorula/aislamiento & purificación , Rhodotorula/metabolismo , Plata/química , Antibacterianos/farmacología , Antifúngicos/química , Brasil , Candida parapsilosis/efectos de los fármacos , Catálisis , Línea Celular/efectos de los fármacos , Supervivencia Celular/efectos de los fármacos , Combinación de Medicamentos , Sinergismo Farmacológico , Fluconazol/farmacología , Humanos , Nanopartículas del Metal/ultraestructura , Azul de Metileno/metabolismo , Pruebas de Sensibilidad Microbiana , Nitrofenoles/metabolismo , Tamaño de la Partícula , Filogenia , Rhodotorula/clasificación , Microbiología del Suelo , Aguas Residuales , Purificación del Agua
10.
Water Sci Technol ; 73(3): 543-9, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-26877036

RESUMEN

Boron-resistant fungi were isolated from the wastewater of a boron mine in Turkey. Boron removal efficiencies of Penicillium crustosum and Rhodotorula mucilaginosa were detected in different media compositions. Minimal Salt Medium (MSM) and two different waste media containing molasses (WM-1) or whey + molasses (WM-2) were tested to make this process cost effective when scaled up. Both isolates achieved high boron removal yields at the highest boron concentrations tested in MSM and WM-1. The maximum boron removal yield by P. crustosum was 45.68% at 33.95 mg l(-1) initial boron concentration in MSM, and was 38.97% at 42.76 mg l(-1) boron for R. mucilaginosa, which seemed to offer an economically feasible method of removing boron from the effluents.


Asunto(s)
Boro/metabolismo , Penicillium/metabolismo , Rhodotorula/metabolismo , Eliminación de Residuos Líquidos/métodos , Contaminantes Químicos del Agua/metabolismo , ADN de Hongos/genética , Minería , Penicillium/clasificación , Penicillium/genética , ARN Ribosómico 5.8S/genética , Rhodotorula/clasificación , Rhodotorula/genética , Turquía , Eliminación de Residuos Líquidos/economía , Aguas Residuales/química
11.
Mikrobiol Z ; 78(5): 2-11, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-30141858

RESUMEN

The red yeasts are currently widely discussed and controversial group of yeasts because of the growing number of reports of their ability to become opportunistic pathogens of plants, animals and humans. The aim of this work was complex identifcation of the red yeast culture isolated from gastrointestinal tract of healthy Hucul long-liver from the Carpathians highland region of Ukraine. Torularhodin was found to be a major component within yeast culture carotenoids complex. According to conventional biochemical and morphological approaches as well as to molecular biological investigation of internal transcribed spacer region (ITS) of ribosomal operon it was concluded that isolate belonged to species Rhodotorula mucilaginosa.


Asunto(s)
Tracto Gastrointestinal/microbiología , Rhodotorula/clasificación , Rhodotorula/aislamiento & purificación , Carotenoides/aislamiento & purificación , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Humanos , Ucrania
12.
J Clin Microbiol ; 52(1): 374-8, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24197888
13.
Cryobiology ; 68(1): 122-8, 2014 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-24463093

RESUMEN

A psychrophilic yeast species was isolated from glacier cryoconite holes of Svalbard. Nucleotide sequences of the strains were studied using D1/D2 domain, ITS region and partial sequences of mitochondrial cytochrome b gene. The strains belonged to a clade of psychrophilic yeasts, but showed marked differences from related species in the D1/D2 domain and biochemical characters. Effects of temperature, salt and media on growth of the cultures were also studied. Screening of the cultures for amylase, cellulase, protease, lipase, urease and catalase activities was carried out. The strains expressed high amylase and lipase activities. Freeze tolerance ability of the isolates indicated the formation of unique hexagonal ice crystal structures due to presence of 'antifreeze proteins' (AFPs). FAME analysis of cultures showed a unique trend of increase in unsaturated fatty acids with decrease in temperature. The major fatty acids recorded were oleic acid, linoleic acid, linolenic acid, palmitic acid, stearic acid, myristic acid and pentadecanoic acid. Based on sequence data and, physiological and morphological properties of the strains, we propose a novel species, Rhodotorula svalbardensis and designate strains MLB-I (CCP-II) and CRY-YB-1 (CBS 12863, JCM 19699, JCM 19700, MTCC 10952) as its type strains (Etymology: sval.bar.den'sis. N.L. fem. adj. svalbardensis pertaining to Svalbard).


Asunto(s)
Citocromos b/clasificación , ADN Intergénico/clasificación , Proteínas Fúngicas/genética , Regulación Fúngica de la Expresión Génica , Filogenia , Rhodotorula/clasificación , Amilasas/genética , Amilasas/metabolismo , Proteínas Anticongelantes/genética , Proteínas Anticongelantes/metabolismo , Regiones Árticas , Frío , Citocromos b/genética , ADN Intergénico/genética , Ácidos Grasos Insaturados/metabolismo , Proteínas Fúngicas/metabolismo , Cubierta de Hielo/microbiología , Lipasa/genética , Lipasa/metabolismo , Estructura Terciaria de Proteína , Rhodotorula/enzimología , Rhodotorula/genética
14.
Antimicrob Agents Chemother ; 57(1): 382-9, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23114761

RESUMEN

Rhodotorula species are emergent fungal pathogens capable of causing invasive infections, primarily fungemia. They are particularly problematic in immunosuppressed patients when using a central venous catheter. In this study, we evaluated the species distribution of 51 clinical and 8 environmental Rhodotorula species isolates using the ID32C system and internal transcribed spacer (ITS) sequencing. Antifungal susceptibility testing and biofilm formation capability using a crystal violet staining assay were performed. Using ITS sequencing as the gold standard, the clinical isolates were identified as follows: 44 R. mucilaginosa isolates, 2 R. glutinis isolates, 2 R. minuta isolates, 2 R. dairenensis isolates, and 1 Rhodosporidium fluviale isolate. The environmental isolates included 7 R. mucilaginosa isolates and 1 R. slooffiae isolate. Using the ID32C system, along with a nitrate assimilation test, only 90.3% of the isolates tested were correctly identified. In the biofilm formation assay, R. mucilaginosa and R. minuta exhibited greater biofilm formation ability compared to the other Rhodotorula species; the clinical isolates of R. mucilaginosa showed greater biofilm formation compared to the environmental isolates (P = 0.04). Amphotericin B showed good in vitro activity (MIC ≤ 1 µg/ml) against planktonic cells, whereas voriconazole and posaconazole showed poor activity (MIC(50)/MIC(90), 2/4 µg/ml). Caspofungin and fluconazole MICs were consistently high for all isolates tested (≥64 µg/ml and ≥ 4 µg/ml, respectively). In this study, we emphasized the importance of molecular methods to correctly identify Rhodotorula species isolates and non-R. mucilaginosa species in particular. The antifungal susceptibility profile reinforces amphotericin B as the antifungal drug of choice for the treatment of Rhodotorula infections. To our knowledge, this is the first study evaluating putative differences in the ability of biofilm formation among different Rhodotorula species.


Asunto(s)
Anfotericina B/farmacología , Antifúngicos/farmacología , ADN Espaciador Ribosómico/genética , Fungemia/microbiología , Rhodotorula/efectos de los fármacos , Rhodotorula/genética , Microbiología del Suelo , Biopelículas/efectos de los fármacos , Biopelículas/crecimiento & desarrollo , ADN Espaciador Ribosómico/clasificación , Fungemia/tratamiento farmacológico , Violeta de Genciana , Humanos , Pruebas de Sensibilidad Microbiana , Viabilidad Microbiana/efectos de los fármacos , Microscopía Electrónica de Rastreo , Filogenia , Plancton/efectos de los fármacos , Plancton/crecimiento & desarrollo , Rhodotorula/clasificación , Rhodotorula/aislamiento & purificación , Análisis de Secuencia de ADN , Especificidad de la Especie
15.
Int J Syst Evol Microbiol ; 63(Pt 10): 3884-3891, 2013 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-23934251

RESUMEN

During the characterization of the mycobiota associated with shallow-water marine environments from Antarctic sea, a novel pink yeast species was isolated. Sequence analysis of the D1/D2 domain of the LSU rDNA gene and 5.8S-ITS regions revealed that the isolated yeast was closely related to Rhodotorula pallida CBS 320(T) and Rhodotorula benthica CBS 9124(T). On the basis of morphological, biochemical and physiological characterization and phylogenetic analyses, a novel basidiomycetous yeast species, Rhodotorula portillonensis sp. nov., is proposed. The type strain is Pi2(T) ( = CBS 12733(T)  = CECT 13081(T)) which was isolated from shallow-water marine sediment in Fildes Bay, King George Island, Antarctica.


Asunto(s)
Sedimentos Geológicos/microbiología , Filogenia , Rhodotorula/clasificación , Agua de Mar/microbiología , Regiones Antárticas , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Datos de Secuencia Molecular , Técnicas de Tipificación Micológica , Rhodotorula/genética , Rhodotorula/aislamiento & purificación , Análisis de Secuencia de ADN
16.
Antonie Van Leeuwenhoek ; 104(1): 83-93, 2013 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-23653119

RESUMEN

A total of 515 yeast strains were isolated from the nasal smears of Queensland koalas and their breeding environments in Japanese zoological parks between 2005 and 2012. The most frequent species in the basidiomycetous yeast biota isolated from koala nasal passages was Cryptococcus neoformans, followed by Rhodotorula minuta. R. minuta was the most frequent species in the breeding environments, while C. neoformans was rare. Seven strains representing two novel yeast species were identified. Analyses of the 26S rDNA (LSU) D1/D2 domain and nuclear ribosomal DNA internal transcribed spacer region sequences indicated that these strains represent new species with close phylogenetic relationships to Cryptococcus and Rhodotorula. A sexual state was not found for either of these two novel yeasts. Key phenotypic characters confirmed that these strains could be placed in Cryptococcus and Rhodotorula. The names Cryptococcus lacticolor sp. nov. (type strain TIMM 10013(T) = JCM 15449(T) = CBS 10915(T) = DSM 21093(T), DDBJ/EMBL/Genbank Accession No.; AB375774 (ITS) and AB375775 (26S rDNA D1/D2 region), MycoBank ID; MB 802688, Fungal Barcoding Database ID; 3174), and Rhodotorula oligophaga sp. nov. (type strain TIMM 10017(T) = JCM 18398(T) = CBS 12623(T) = DSM 25814(T), DDBJ/EMBL/Genbank Accession No.; AB702967 (ITS) and AB702967 (26S rDNA D1/D2 region), MycoBank ID; MB 802689, Fungal Barcoding Database ID; 3175) are proposed for these new species.


Asunto(s)
Animales de Zoológico/microbiología , Cryptococcus/aislamiento & purificación , Cavidad Nasal/microbiología , Phascolarctidae/microbiología , Rhodotorula/aislamiento & purificación , Animales , Secuencia de Bases , Cruzamiento , Portador Sano/microbiología , Criptococosis/microbiología , Criptococosis/transmisión , Criptococosis/veterinaria , Cryptococcus/clasificación , Cryptococcus/genética , Cryptococcus/crecimiento & desarrollo , Cryptococcus/metabolismo , Cryptococcus/patogenicidad , Cryptococcus neoformans/aislamiento & purificación , ADN de Hongos/genética , ADN Ribosómico/genética , Femenino , Hongos/aislamiento & purificación , Japón , Masculino , Datos de Secuencia Molecular , Micología/métodos , Fenotipo , Filogenia , Queensland , Rhodotorula/clasificación , Rhodotorula/genética , Rhodotorula/crecimiento & desarrollo , Rhodotorula/metabolismo , Rhodotorula/patogenicidad , Especificidad de la Especie
17.
J Dairy Sci ; 96(12): 7692-7, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24119798

RESUMEN

This study reports a rapid PCR-based technique using a one-enzyme RFLP for discrimination of yeasts isolated from bovine clinical and subclinical mastitis milk samples. We analyzed a total of 1,486 milk samples collected over 1 yr in south Sardinia and northern Italy, and 142 yeast strains were preliminarily grouped based on their cultural morphology and physiological characteristics. Assimilation tests were conducted using the identification kit API ID 32C and APILAB Plus software (bioMérieux, Marcy l'Etoile, France). For PCR-RFLP analysis, the 18S-ITS1-5.8S ribosomal(r)DNA region was amplified and then digested with HaeIII, and dendrogram analysis of RFLP fragments was carried out. Furthermore, within each of the groups identified by the API or PCR-RFLP methods, the identification of isolates was confirmed by sequencing of the D1/D2 region using an ABI Prism 310 automatic sequencer (Applied Biosystems, Foster City, CA). The combined phenotypic and molecular approach enabled the identification of 17 yeast species belonging to the genera Candida (47.9%), Cryptococcus (21.1%), Trichosporon (19.7%), Geotrichum (7.1%), and Rhodotorula (4.2%). All Candida species were correctly identified by the API test and their identification confirmed by sequencing. All strains identified with the API system as Geotrichum candidum, Cryptococcus uniguttulatus, and Rhodotorula glutinis also produced characteristic restriction patterns and were confirmed as Galactomyces geotrichum (a teleomorph of G. candidum), Filobasidium uniguttulatum (teleomorph of Crypt. uniguttulatus), and R. glutinis, respectively, by D1/D2 rDNA sequencing. With regard to the genus Trichosporon, preliminary identification by API was problematic, whereas the RFLP technique used in this study gave characteristic restriction profiles for each species. Moreover, sequencing of the D1/D2 region allowed not only successful identification of Trichosporon gracile where API could not, but also correct identification of misidentified isolates. In conclusion, the 18S-ITS1-5.8S region appears to be useful in detecting genetic variability among yeast species, which is valuable for taxonomic purposes and for species identification. We have established an RFLP database for yeast species identified in milk samples using the software GelCompar II and the RFLP database constitutes an initial method for veterinary yeast identification.


Asunto(s)
Mastitis Bovina/microbiología , Reacción en Cadena de la Polimerasa , Polimorfismo de Longitud del Fragmento de Restricción , Levaduras/aislamiento & purificación , Animales , Secuencia de Bases , Candida/clasificación , Candida/genética , Bovinos , Cryptococcus/clasificación , Cryptococcus/genética , ADN de Hongos/química , ADN Ribosómico/análisis , ADN Ribosómico/genética , Femenino , Francia , Geotrichum/clasificación , Geotrichum/genética , Italia , Leche/microbiología , Rhodotorula/clasificación , Rhodotorula/genética , Saccharomyces cerevisiae/clasificación , Saccharomyces cerevisiae/genética , Análisis de Secuencia de ADN , Trichosporon/clasificación , Trichosporon/genética , Levaduras/clasificación , Levaduras/genética
18.
World J Microbiol Biotechnol ; 29(3): 475-87, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23108665

RESUMEN

Lindane is a notorious organochlorine pesticide due to its high toxicity, persistence in the environment and its tendency to bioaccumulate. A yeast strain isolated from sorghum cultivation field was able to use lindane as carbon and energy source under aerobic conditions. With molecular techniques, it was identified and named as Rhodotorula strain VITJzN03. The effects of nutritional and environmental factors on yeast growth and the biodegradation of lindane was investigated. The maximum production of yeast biomass along with 100 % lindane mineralization was noted at an initial lindane concentration of 600 mg l(-1) within a period of 10 days. Lindane concentration above 600 mg l(-1) inhibited the growth of yeast in liquid medium. A positive relationship was noted between the release of chloride ions and the increase of yeast biomass as well as degradation of lindane. The calculated degradation rate and half life of lindane were found to be 0.416 day(-1) and 1.66 days, respectively. The analysis of the metabolites using GC-MS identified the formation of seven intermediates including γ-pentachlorocyclohexane(γ-PCCH), 1,3,4,6-tetrachloro-1,4-cyclohexadiene(1,4-TCCHdiene), 1,2,4-trichlorobenzene (1,2,4 TCB), 1,4-dichlorobenzene (1,4 DCB), chloro-cis-1,2-dihydroxycyclohexadiene (CDCHdiene), 3-chlorocatechol (3-CC) and maleylacetate (MA) derivatives indicating that lindane degradation follows successive dechlorination and oxido-reduction. Based on the results of the present study, the possible pathway for lindane degradation by Rhodotorula sp. VITJzN03 has been proposed. To the best of our knowledge, this is the first report on lindane degradation by yeast which can serve as a potential agent for in situ bioremediation of medium to high level lindane-contaminated sites.


Asunto(s)
Agricultura , Hexaclorociclohexano/metabolismo , Plaguicidas/metabolismo , Rhodotorula/metabolismo , Microbiología del Suelo , Biodegradación Ambiental , Biotecnología/métodos , ADN Espaciador Ribosómico/genética , Cromatografía de Gases y Espectrometría de Masas , Datos de Secuencia Molecular , ARN Ribosómico/genética , Rhodotorula/clasificación , Rhodotorula/genética , Rhodotorula/aislamiento & purificación , Análisis de Secuencia de ADN
19.
Environ Technol ; 34(5-8): 629-36, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23837312

RESUMEN

The aim of this study was to investigate the Rhodotorula mucilaginosa CH4 and Aspergillus niger P6 abilities to purify olive mill wastewater (OMW) in single pure and mixed cultures during the treatment. Both fungi were molecularly identified. OMW was used at five dilutions from 5% to 30% with chemical oxygen demand (COD) ranging from 11,600 to 24,600 mg L(-1). Firstly, each fungus was used separately, then they were successively used to treat the OMW. In single pure culture, A. niger showed a better efficiency in OMW purification than R. mucilaginosa. Furthermore, when successively used, the two studied strains exhibited improvements in the decrease of COD, polyphenolic compounds concentration and effluent colour. COD removals were 95.68-56.71% by R. mucilaginosa and 98.02-69.51% by A. niger for OMW dilutions varying from 5% to 30%. Both strains showed an important polyphenolic compounds removal of 83-45% by R. mucilaginosa and 94-58% by A. niger, in accordance with the OMW COD initially used. The COD and phenolic compound removals fitted simple equation models, with high regression coefficients. The strains' growth kinetics decreased according to the OMW concentration, but, when successively used, fungal growth was improved, allowing efficient effluent treatment.


Asunto(s)
Aspergillus niger/metabolismo , Olea/microbiología , Extractos Vegetales/metabolismo , Rhodotorula/metabolismo , Aguas Residuales/microbiología , Contaminantes Químicos del Agua/metabolismo , Purificación del Agua/métodos , Agricultura/métodos , Aspergillus niger/clasificación , Técnicas de Cultivo Celular por Lotes/métodos , Biodegradación Ambiental , Reactores Biológicos/microbiología , Residuos Industriales/prevención & control , Extractos Vegetales/aislamiento & purificación , Rhodotorula/clasificación , Especificidad de la Especie , Contaminantes Químicos del Agua/aislamiento & purificación
20.
Transpl Infect Dis ; 14(1): 91-4, 2012 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-21535337

RESUMEN

Rhodotorula species have been increasingly recognized as emerging pathogens, particularly in immunocompromised patients. We herein report on a patient with myelodysplastic syndrome who developed fungemia due to Rhodotorula mucilaginosa after allogeneic hematopoietic stem cell transplantation (HSCT) from an unrelated donor. He developed severe acute graft-versus-host disease requiring high-dose steroids, and had serially been administered fluconazole and micafungin for the prophylaxis of fungal infection. Although several cases of Rhodotorula infection after HSCT have been reported, all of them were recipients of autologous HSCT, not allogeneic HSCT. A review of all the reported cases of Rhodotorula infection after HSCT revealed that all patients had received fluconazole or echinocandins before the onset of infection. The findings suggest that Rhodotorula species could be causative yeasts, particularly in patients receiving fluconazole or echinocandins, both of which are inactive against the species.


Asunto(s)
Fungemia/microbiología , Trasplante de Células Madre Hematopoyéticas/efectos adversos , Micosis/microbiología , Rhodotorula/aislamiento & purificación , Anfotericina B/uso terapéutico , Antifúngicos/uso terapéutico , Fungemia/tratamiento farmacológico , Enfermedad Injerto contra Huésped/etiología , Humanos , Masculino , Persona de Mediana Edad , Micosis/tratamiento farmacológico , Síndromes Mielodisplásicos/terapia , Rhodotorula/clasificación , Rhodotorula/genética , Trasplante Homólogo/efectos adversos , Donante no Emparentado
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