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Cellulomonas pakistanensis sp. nov., a moderately halotolerant Actinobacteria.
Ahmed, Iftikhar; Kudo, Takuji; Abbas, Saira; Ehsan, Muhammad; Iino, Takao; Fujiwara, Toru; Ohkuma, Moriya.
Affiliation
  • Ahmed I; Laboratory of Plant Nutrition and Fertilizers, Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
  • Kudo T; Japan Collection of Microorganisms, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.
  • Abbas S; National Culture Collection of Pakistan, National Institute for Genomics and Advanced Biotechnology (NIGAB), National Agricultural Research Centre (NARC), Park Road, Islamabad-45500, Pakistan.
  • Ehsan M; Japan Collection of Microorganisms, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.
  • Iino T; Laboratory of Plant Nutrition and Fertilizers, Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
  • Fujiwara T; Japan Collection of Microorganisms, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.
  • Ohkuma M; National Culture Collection of Pakistan, National Institute for Genomics and Advanced Biotechnology (NIGAB), National Agricultural Research Centre (NARC), Park Road, Islamabad-45500, Pakistan.
Int J Syst Evol Microbiol ; 64(Pt 7): 2305-2311, 2014 Jul.
Article in En | MEDLINE | ID: mdl-24733176
ABSTRACT
A rod-shaped, motile, facultatively anaerobic and moderately halotolerant plant-growth-promoting actinobacterial strain, designated NCCP-11(T), was isolated from paddy grains. To delineate its taxonomic position, the strain was subjected to a polyphasic characterization. Cells of strain NCCP-11(T) grew at 10-37 °C (optimum 28-32 °C), at pH 6-9 (optimum pH 7) and in 0-12% (w/v) NaCl (optimum 1-2%) in broth medium. Based on 16S rRNA gene sequence analysis, strain NCCP-11(T) showed highest similarity to the type strains of Cellulomonas hominis (98.99%) and Cellulomonas denverensis (98.09 %) and less than 97 % with other closely related taxa. The chemotaxonomic data [major menaquinone MK-9(H4); cell-wall peptidoglycan type A4ß; major fatty acids anteiso-C15 0, C16 0, C14 0 and anteiso-C17 0; major polar lipids diphosphatidylglycerol, phosphatidylinositol, phosphatidylinositolmannosides and two unknown polar lipids] also supported the affiliation of strain NCCP-11(T) to the genus Cellulomonas. The level of DNA-DNA relatedness between strain NCCP-11(T) and the two type strains mentioned above was less than 42.7%. On the basis of DNA-DNA relatedness, physiological and biochemical characteristics and phylogenetic position, strain NCCP-11(T) can be differentiated from species of the genus Cellulomonas with validly published names and thus represents a novel species, for which the name Cellulomonas pakistanensis sp. nov. is proposed. The type strain is NCCP-11(T) ( = DSM 24792(T) = JCM 18755(T) = KCTC 19798(T)).
Subject(s)

Full text: 1 Database: MEDLINE Main subject: Phylogeny / Oryza / Cellulomonas Country/Region as subject: Asia Language: En Year: 2014 Type: Article

Full text: 1 Database: MEDLINE Main subject: Phylogeny / Oryza / Cellulomonas Country/Region as subject: Asia Language: En Year: 2014 Type: Article