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Alterations in cancer cell metabolism: the Warburg effect and metabolic adaptation.
Asgari, Yazdan; Zabihinpour, Zahra; Salehzadeh-Yazdi, Ali; Schreiber, Falk; Masoudi-Nejad, Ali.
Affiliation
  • Asgari Y; Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran.
  • Zabihinpour Z; Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran.
  • Salehzadeh-Yazdi A; Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran.
  • Schreiber F; Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle, Germany; Clayton School of Information Technology, Monash University, Clayton, VIC, Australia. Electronic address: schreibe@ipk-gatersleben.de.
  • Masoudi-Nejad A; Laboratory of Systems Biology and Bioinformatics (LBB), Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran. Electronic address: amasoudin@ibb.ut.ac.ir.
Genomics ; 105(5-6): 275-81, 2015 May.
Article in En | MEDLINE | ID: mdl-25773945
ABSTRACT
The Warburg effect means higher glucose uptake of cancer cells compared to normal tissues, whereas a smaller fraction of this glucose is employed for oxidative phosphorylation. With the advent of high throughput technologies and computational systems biology, cancer cell metabolism has been reinvestigated over the last decades toward identifying various events underlying "how" and "why" a cancer cell employs aerobic glycolysis. Significant progress has been shaped to revise the Warburg effect. In this study, we have integrated the gene expression of 13 different cancer cells with the genome-scale metabolic network of human (Recon1) based on the E-Flux method, and analyzed them based on constraint-based modeling. Results show that regardless of significant up- and down-regulated metabolic genes, the distribution of metabolic changes is similar in different cancer types. These findings support the theory that the Warburg effect is a consequence of metabolic adaptation in cancer cells.
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Full text: 1 Database: MEDLINE Main subject: Transcriptome / Glucose / Neoplasms Type of study: Prognostic_studies Limits: Humans Language: En Year: 2015 Type: Article

Full text: 1 Database: MEDLINE Main subject: Transcriptome / Glucose / Neoplasms Type of study: Prognostic_studies Limits: Humans Language: En Year: 2015 Type: Article