Noise cancellation using total variation for copy number variation detection.

Zare, Fatima; Hosny, Abdelrahman; Nabavi, Sheida

Zare, Fatima; Hosny, Abdelrahman; Nabavi, Sheida.

Affiliation

Zare F; Computer Science and Engineering Department, University of Connecticut, Storrs, CT, USA. fatemeh.zare@uconn.edu.
Hosny A; Computer Science and Engineering Department, University of Connecticut, Storrs, CT, USA.
Nabavi S; Computer Science and Engineering Department and Institute for Systems Genomics, University of Connecticut, Storrs, CT, USA.

BMC Bioinformatics ; 19(Suppl 11): 361, 2018 Oct 22.

Article in En | MEDLINE | ID: mdl-30343665

Subject(s)

DNA Copy Number Variations/genetics; High-Throughput Nucleotide Sequencing/methods; Algorithms; Breast Neoplasms/genetics; Computer Simulation; Female; Genomics; Humans; Signal Processing, Computer-Assisted; Time Factors; Wavelet Analysis

Key words

Copy number variation; Denoising; Next generation sequencing; Signal processing; Taut string; Total variation

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Full text: 1 Database: MEDLINE Main subject: DNA Copy Number Variations / High-Throughput Nucleotide Sequencing Type of study: Diagnostic_studies / Prognostic_studies Limits: Female / Humans Language: En Year: 2018 Type: Article

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