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Vallitalea okinawensis sp. nov., isolated from Okinawa Trough sediment and emended description of the genus Vallitalea.
Sun, Yu-Tong; Zhou, Nan; Wang, Bao-Jun; Liu, Xiao-Dong; Jiang, Cheng-Ying; Ge, Xin; Liu, Shuang-Jiang.
Affiliation
  • Sun YT; 1​College of Life Science, Hebei University, Baoding 071002, PR China.
  • Zhou N; 2​State Key Laboratory of Microbial Resources, and Environmental Microbiology Research Center (EMRC), Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
  • Wang BJ; 2​State Key Laboratory of Microbial Resources, and Environmental Microbiology Research Center (EMRC), Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
  • Liu XD; 3​University of Chinese Academy of Sciences, Beijing 100049, PR China.
  • Jiang CY; 2​State Key Laboratory of Microbial Resources, and Environmental Microbiology Research Center (EMRC), Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
  • Ge X; 2​State Key Laboratory of Microbial Resources, and Environmental Microbiology Research Center (EMRC), Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
  • Liu SJ; 2​State Key Laboratory of Microbial Resources, and Environmental Microbiology Research Center (EMRC), Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
Int J Syst Evol Microbiol ; 69(2): 404-410, 2019 Feb.
Article in En | MEDLINE | ID: mdl-30540237
ABSTRACT
A polyphasic study was conducted to characterize an obligately anaerobic bacterial strain, S15T, that was isolated from Okinawa Trough sediment. Strain S15T was Gram-stain-negative, non-motile and rod-shaped. Spores were not observed. Strain S15T grew anaerobically at 20-35 °C (optimum at 25-30 °C) and at pH range of 6.0-8.5 (optimum at 7.5). Analysis of 16S rRNA gene sequences showed that strain S15T was phylogenetically related to Vallitalea guaymasensis Ra1766G1T (94.0 %) and Vallitalea pronyensis FatNI3T (93.1 %). The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and glycolipids. The predominant fatty acids of strain S15T were iso-C15  0, anteiso-C15  0, iso-C16  0 and C16  0. The draft genome was 5.86 Mb with a DNA G+C content of 33.9 mol%. A total of 5285 genes were predicted and, of those, 4669 genes were annotated. The genome data supported the result that strain S15T assimilated various carbon sources. On the basis of unique phenotypic, chemotaxonomic and phylogenetic comparisons, strain S15T is proposed to represent a novel species within the genus Vallitalea, and the name Vallitaleaokinawensis sp. nov. is proposed. The type strain is S15T=CGMCC 1.5231T=KCTC 15675T.
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Full text: 1 Database: MEDLINE Main subject: Phylogeny / Seawater / Clostridiales Language: En Year: 2019 Type: Article

Full text: 1 Database: MEDLINE Main subject: Phylogeny / Seawater / Clostridiales Language: En Year: 2019 Type: Article