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Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks.
Rule, Adam; Birmingham, Amanda; Zuniga, Cristal; Altintas, Ilkay; Huang, Shih-Cheng; Knight, Rob; Moshiri, Niema; Nguyen, Mai H; Rosenthal, Sara Brin; Pérez, Fernando; Rose, Peter W.
Affiliation
  • Rule A; Design Lab, UC San Diego, La Jolla, California, United States of America.
  • Birmingham A; Center for Computational Biology and Bioinformatics, UC San Diego, La Jolla, California, United States of America.
  • Zuniga C; Department of Pediatrics, UC San Diego, La Jolla, California, United States of America.
  • Altintas I; Data Science Hub, San Diego Supercomputer Center, UC San Diego, La Jolla, California, United States of America.
  • Huang SC; Data Science Hub, San Diego Supercomputer Center, UC San Diego, La Jolla, California, United States of America.
  • Knight R; Department of Pediatrics, UC San Diego, La Jolla, California, United States of America.
  • Moshiri N; Departments of Bioengineering, and Computer Science and Engineering, and Center for Microbiome Innovation, UC San Diego, La Jolla, California, United States of America.
  • Nguyen MH; Bioinformatics and Systems Biology Graduate Program, UC San Diego, La Jolla, California, United States of America.
  • Rosenthal SB; Data Science Hub, San Diego Supercomputer Center, UC San Diego, La Jolla, California, United States of America.
  • Pérez F; Center for Computational Biology and Bioinformatics, UC San Diego, La Jolla, California, United States of America.
  • Rose PW; Department of Statistics and Berkeley Institute for Data Science, UC Berkeley, and Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
PLoS Comput Biol ; 15(7): e1007007, 2019 07.
Article in En | MEDLINE | ID: mdl-31344036
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Full text: 1 Database: MEDLINE Main subject: Writing / Guidelines as Topic / Computational Biology Type of study: Guideline Limits: Humans Language: En Year: 2019 Type: Article
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PubMed Links
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Full text: 1 Database: MEDLINE Main subject: Writing / Guidelines as Topic / Computational Biology Type of study: Guideline Limits: Humans Language: En Year: 2019 Type: Article