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Water Microbiota from a Commercial Alfalfa Sprout Crop over 4 Days of Growth.
Reed, Elizabeth; Sanderson, Robert; Sanderson, Barbara; Ramachandran, Padmini; Commichaux, Seth; Brown, Eric; Zheng, Jie; Strain, Errol; Ottesen, Andrea.
Affiliation
  • Reed E; Center for Food Safety and Applied Nutrition, Food and Drug Administration, U.S. Department of Health and Human Services, College Park, Maryland, USA elizabeth.reed@fda.hhs.gov.
  • Sanderson R; Jonathan's Sprouts, Rochester, Massachusetts, USA.
  • Sanderson B; Jonathan's Sprouts, Rochester, Massachusetts, USA.
  • Ramachandran P; Center for Food Safety and Applied Nutrition, Food and Drug Administration, U.S. Department of Health and Human Services, College Park, Maryland, USA.
  • Commichaux S; Center for Food Safety and Applied Nutrition, Food and Drug Administration, U.S. Department of Health and Human Services, College Park, Maryland, USA.
  • Brown E; Center for Food Safety and Applied Nutrition, Food and Drug Administration, U.S. Department of Health and Human Services, College Park, Maryland, USA.
  • Zheng J; Center for Food Safety and Applied Nutrition, Food and Drug Administration, U.S. Department of Health and Human Services, College Park, Maryland, USA.
  • Strain E; Center for Veterinary Medicine, Food and Drug Administration, U.S. Department of Health and Human Services, Laurel, Maryland, USA.
  • Ottesen A; Center for Veterinary Medicine, Food and Drug Administration, U.S. Department of Health and Human Services, Laurel, Maryland, USA.
Microbiol Resour Announc ; 10(2)2021 Jan 14.
Article in En | MEDLINE | ID: mdl-33446581
ABSTRACT
Sprouts have been implicated in numerous foodborne illness outbreaks. To better understand baseline microbial profiles of irrigation water and subsequent spent irrigation water of alfalfa sprouts, DNA from water was extracted, sequenced, and annotated with CosmosID and a custom pipeline to provide bacterial, fungal, protist, and antimicrobial resistance gene profiles.
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Full text: 1 Database: MEDLINE Language: En Year: 2021 Type: Article
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Full text: 1 Database: MEDLINE Language: En Year: 2021 Type: Article