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Deep learning-based feature extraction for prediction and interpretation of sharp-wave ripples in the rodent hippocampus.
Navas-Olive, Andrea; Amaducci, Rodrigo; Jurado-Parras, Maria-Teresa; Sebastian, Enrique R; de la Prida, Liset M.
Affiliation
  • Navas-Olive A; Instituto Cajal, CSIC, Madrid, Spain.
  • Amaducci R; Grupo de Neurocomputación Biológica (GNB), Universidad Autónoma de Madrid, Madrid, Spain.
  • Jurado-Parras MT; Instituto Cajal, CSIC, Madrid, Spain.
  • Sebastian ER; Instituto Cajal, CSIC, Madrid, Spain.
  • de la Prida LM; Instituto Cajal, CSIC, Madrid, Spain.
Elife ; 112022 09 05.
Article in En | MEDLINE | ID: mdl-36062906
Artificial intelligence is finding greater use in society through its ability to process data in new ways. One particularly useful approach known as convolutional neural networks is typically used for image analysis, such as face recognition. This type of artificial intelligence could help neuroscientists analyze data produced by new technologies that record brain activity with higher resolution. Advanced processing could potentially identify events in the brain in real-time. For example, signals called sharp-wave ripples are produced by the hippocampus, a brain region involved in forming memories. Detecting and interacting with these events as they are happening would permit a better understanding of how memory works. However, these signals can vary in form, so it is necessary to detect several distinguishing features to recognize them. To achieve this, Navas-Olive, Amaducci et al. trained convolutional neural networks using signals from electrodes placed in a region of the mouse hippocampus that had already been analyzed, and 'telling' the neural networks whether they got their identifications right or wrong. Once the networks learned to identify sharp-wave ripples from this data, they could then apply this knowledge to analyze other recordings. These included datasets from another part of the mouse hippocampus, the rat brain, and ultra-dense probes that simultaneously assess different brain regions. The convolutional networks were able to recognize sharp-wave ripple events across these diverse circumstances by identifying unique characteristics in the shapes of the waves. These results will benefit neuroscientists by providing new tools to explore brain signals. For instance, this could allow them to analyze the activity of the hippocampus in real-time and potentially discover new aspects of the processes behind forming memories.
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Full text: 1 Database: MEDLINE Main subject: Rodentia / Deep Learning Type of study: Prognostic_studies / Risk_factors_studies Limits: Animals Language: En Year: 2022 Type: Article

Full text: 1 Database: MEDLINE Main subject: Rodentia / Deep Learning Type of study: Prognostic_studies / Risk_factors_studies Limits: Animals Language: En Year: 2022 Type: Article