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A multi-omics dataset for the analysis of frontotemporal dementia genetic subtypes.
Menden, Kevin; Francescatto, Margherita; Nyima, Tenzin; Blauwendraat, Cornelis; Dhingra, Ashutosh; Castillo-Lizardo, Melissa; Fernandes, Noémia; Kaurani, Lalit; Kronenberg-Versteeg, Deborah; Atasu, Burcu; Sadikoglou, Eldem; Borroni, Barbara; Rodriguez-Nieto, Salvador; Simon-Sanchez, Javier; Fischer, Andre; Craig, David Wesley; Neumann, Manuela; Bonn, Stefan; Rizzu, Patrizia; Heutink, Peter.
Affiliation
  • Menden K; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Francescatto M; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Nyima T; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Blauwendraat C; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Dhingra A; National Institute on Aging, National Institutes of Health, Bethesda, MD, USA.
  • Castillo-Lizardo M; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Fernandes N; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Kaurani L; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Kronenberg-Versteeg D; German Center for Neurodegenerative Diseases, Göttingen, Germany.
  • Atasu B; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Sadikoglou E; Hertie Institute for Clinical Brain Research, Tübingen, Germany.
  • Borroni B; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Rodriguez-Nieto S; Hertie Institute for Clinical Brain Research, Tübingen, Germany.
  • Simon-Sanchez J; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Fischer A; Neurology Unit, Department of Clinical and Experimental Sciences, University of Brescia, Brescia, Italy.
  • Craig DW; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Neumann M; German Center for Neurodegenerative Diseases, Tübingen, Germany.
  • Bonn S; Hertie Institute for Clinical Brain Research, Tübingen, Germany.
  • Rizzu P; German Center for Neurodegenerative Diseases, Göttingen, Germany.
  • Heutink P; University of Southern California, California, USA.
Sci Data ; 10(1): 849, 2023 12 01.
Article in En | MEDLINE | ID: mdl-38040703
ABSTRACT
Understanding the molecular mechanisms underlying frontotemporal dementia (FTD) is essential for the development of successful therapies. Systematic studies on human post-mortem brain tissue of patients with genetic subtypes of FTD are currently lacking. The Risk and Modyfing Factors of Frontotemporal Dementia (RiMod-FTD) consortium therefore has generated a multi-omics dataset for genetic subtypes of FTD to identify common and distinct molecular mechanisms disturbed in disease. Here, we present multi-omics datasets generated from the frontal lobe of post-mortem human brain tissue from patients with mutations in MAPT, GRN and C9orf72 and healthy controls. This data resource consists of four datasets generated with different technologies to capture the transcriptome by RNA-seq, small RNA-seq, CAGE-seq, and methylation profiling. We show concrete examples on how to use the resulting data and confirm current knowledge about FTD and identify new processes for further investigation. This extensive multi-omics dataset holds great value to reveal new research avenues for this devastating disease.
Subject(s)

Full text: 1 Database: MEDLINE Main subject: Frontotemporal Dementia / Multiomics Limits: Humans Language: En Year: 2023 Type: Article

Full text: 1 Database: MEDLINE Main subject: Frontotemporal Dementia / Multiomics Limits: Humans Language: En Year: 2023 Type: Article