Using transition density models to interpret experimental optical spectra of exciton-coupled cyanine (iCy3)2 dimer probes of local DNA conformations at or near functional protein binding sites.

Heussman, Dylan; Enkhbaatar, Lulu; Sorour, Mohammed I; Kistler, Kurt A; von Hippel, Peter H; Matsika, Spiridoula; Marcus, Andrew H

Heussman, Dylan; Enkhbaatar, Lulu; Sorour, Mohammed I; Kistler, Kurt A; von Hippel, Peter H; Matsika, Spiridoula; Marcus, Andrew H.

Affiliation

Heussman D; Center for Optical, Molecular and Quantum Science, Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR 97403, USA.
Enkhbaatar L; Institute of Molecular Biology, Department of Chemistry and Biochemistry, and University of Oregon, Eugene, OR 97403, USA.
Sorour MI; Center for Optical, Molecular and Quantum Science, Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR 97403, USA.
Kistler KA; Institute of Molecular Biology, Department of Chemistry and Biochemistry, and University of Oregon, Eugene, OR 97403, USA.
von Hippel PH; Department of Chemistry, Temple University, Philadelphia, PA 19122, USA.
Matsika S; Department of Chemistry, Brandywine Campus, The Pennsylvania State University, Media, PA 19063, USA.
Marcus AH; Institute of Molecular Biology, Department of Chemistry and Biochemistry, and University of Oregon, Eugene, OR 97403, USA.

Nucleic Acids Res ; 52(3): 1272-1289, 2024 Feb 09.

Article in En | MEDLINE | ID: mdl-38050987