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Novel Bacteroides Vulgatus strain protects against gluten-induced break of human celiac gut epithelial homeostasis: a pre-clinical proof-of-concept study.
Tran, Tina; Senger, Stefania; Baldassarre, Mariella; Brosnan, Rachel A; Cristofori, Fernanda; Crocco, Marco; De Santis, Stefania; Elli, Luca; Faherty, Christina S; Francavilla, Ruggero; Goodchild-Michelman, Isabella; Kenyon, Victoria A; Leonard, Maureen M; Lima, Rosiane S; Malerba, Federica; Montuori, Monica; Morelli, Annalisa; Norsa, Lorenzo; Passaro, Tiziana; Piemontese, Pasqua; Reed, James C; Sansotta, Naire; Valitutti, Francesco; Zomorrodi, Ali R; Fasano, Alessio.
Affiliation
  • Tran T; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Senger S; Center for Scientific Review, National Institutes of Health, Bethesda, MD, USA.
  • Baldassarre M; NICU, University of Bari, Bari, Italy.
  • Brosnan RA; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Cristofori F; Pediatric Unit "Bruno Trambusti", Osp Pediatrico Giovanni XXIII, University of Bari, Bari, Italy.
  • Crocco M; Department of Pediatrics, IRCCS Ospedale Giannina Gaslini, Genova, Italy.
  • De Santis S; Digestive Health Research Institute, Case Western Reserve University School of Medicine, Cleveland, OH, USA.
  • Elli L; Department of Pathology, Case Western University School of Medicine, Cleveland, OH, USA.
  • Faherty CS; Celiac Disease Referral Center, Ospedale Maggiore Policlinico, Milan, Italy.
  • Francavilla R; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Goodchild-Michelman I; Pediatric Unit "Bruno Trambusti", Osp Pediatrico Giovanni XXIII, University of Bari, Bari, Italy.
  • Kenyon VA; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Leonard MM; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Lima RS; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Malerba F; Division of Pediatric Gastroenterology and Nutrition, Department of Pediatrics, Mass General for Children, Boston, MA, USA.
  • Montuori M; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Morelli A; Department of Pediatrics, IRCCS Ospedale Giannina Gaslini, Genova, Italy.
  • Norsa L; Pediatric Gastroenterology Unit, Policlinico Umberto I, Sapienza University of Rome, Rome, Italy.
  • Passaro T; Pediatric Training Program, University of Salerno School of Medicine, Salerno, Italy.
  • Piemontese P; Pediatric Hepatology Gastroenterology and Transplant Unit, Ospedale Papa Giovanni XXIII Bergamo, Bergamo, Italy.
  • Reed JC; Celiac Disease Referral Center, "San Giovanni di Dio e Ruggi d'Aragona" University Hospital, Pole of Cava de' Tirreni, Salerno, Italy.
  • Sansotta N; NICU, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, University of Milan, Milan, Italy.
  • Valitutti F; Mucosal Immunology and Biology Research Center, Division of Pediatric Gastroenterology and Nutrition, Massachusetts General Hospital; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
  • Zomorrodi AR; Division of Pediatric Gastroenterology and Nutrition, Department of Pediatrics, Mass General for Children, Boston, MA, USA.
  • Fasano A; Pediatric Hepatology Gastroenterology and Transplant Unit, Ospedale Papa Giovanni XXIII Bergamo, Bergamo, Italy.
Pediatr Res ; 95(5): 1254-1264, 2024 Apr.
Article in En | MEDLINE | ID: mdl-38177249
ABSTRACT
BACKGROUND AND

AIMS:

We have identified a decreased abundance of microbial species known to have a potential anti-inflammatory, protective effect in subjects that developed Celiac Disease (CeD) compared to those who did not. We aim to confirm the potential protective role of one of these species, namely Bacteroides vulgatus, and to mechanistically establish the effect of bacterial bioproducts on gluten-dependent changes on human gut epithelial functions.

METHODS:

We identified, isolated, cultivated, and sequenced a unique novel strain (20220303-A2) of B. vulgatus found only in control subjects. Using a human gut organoid system developed from pre-celiac patients, we monitored epithelial phenotype and innate immune cytokines at baseline, after exposure to gliadin, or gliadin plus B. vulgatus cell free supernatant (CFS).

RESULTS:

Following gliadin exposure, we observed increases in epithelial cell death, epithelial monolayer permeability, and secretion of pro-inflammatory cytokines. These effects were mitigated upon exposure to B. vulgatus 20220303-A2 CFS, which had matched phenotype gene product mutations. These protective effects were mediated by epigenetic reprogramming of the organoids treated with B. vulgatus CFS.

CONCLUSIONS:

We identified a unique strain of B. vulgatus that may exert a beneficial role by protecting CeD epithelium against a gluten-induced break of epithelial tolerance through miRNA reprogramming. IMPACT Gut dysbiosis precedes the onset of celiac disease in genetically at-risk infants. This dysbiosis is characterized by the loss of protective bacterial strains in those children who will go on to develop celiac disease. The paper reports the mechanism by which one of these protective strains, B. vulgatus, ameliorates the gluten-induced break of gut epithelial homeostasis by epigenetically re-programming the target intestinal epithelium involving pathways controlling permeability, immune response, and cell turnover.