Functional and evolutionary genomic inferences in <i>Populus</i> through genome and population sequencing of American and European aspen.

Lin, Yao-Cheng; Wang, Jing; Delhomme, Nicolas; Schiffthaler, Bastian; Sundström, Görel; Zuccolo, Andrea; Nystedt, Björn; Hvidsten, Torgeir R; de la Torre, Amanda; Cossu, Rosa M; Hoeppner, Marc P; Lantz, Henrik; Scofield, Douglas G; Zamani, Neda; Johansson, Anna; Mannapperuma, Chanaka; Robinson, Kathryn M; Mähler, Niklas; Leitch, Ilia J; Pellicer, Jaume; Park, Eung-Jun; Van Montagu, Marc; Van de Peer, Yves; Grabherr, Manfred; Jansson, Stefan; Ingvarsson, Pär K; Street, Nathaniel R

Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen.

Lin, Yao-Cheng; Wang, Jing; Delhomme, Nicolas; Schiffthaler, Bastian; Sundström, Görel; Zuccolo, Andrea; Nystedt, Björn; Hvidsten, Torgeir R; de la Torre, Amanda; Cossu, Rosa M; Hoeppner, Marc P; Lantz, Henrik; Scofield, Douglas G; Zamani, Neda; Johansson, Anna; Mannapperuma, Chanaka; Robinson, Kathryn M; Mähler, Niklas; Leitch, Ilia J; Pellicer, Jaume; Park, Eung-Jun; Van Montagu, Marc; Van de Peer, Yves; Grabherr, Manfred; Jansson, Stefan; Ingvarsson, Pär K; Street, Nathaniel R.

Afiliación

Lin YC; VIB-UGent Center for Plant Systems Biology and Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Wang J; Biotechnology Center in Southern Taiwan, Academia Sinica, Tainan 74145, Taiwan.
Delhomme N; Agricultural Biotechnology Research Center, Academia Sinica, Tainan 74145, Taiwan.
Schiffthaler B; Umeå Plant Science Centre, Department of Ecology and Environmental Science, Umeå University 901 87, Umeå, Sweden.
Sundström G; Centre for Integrative Genetics (CIGENE), Department of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, 5003 Ås, Norway.
Zuccolo A; Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.
Nystedt B; Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden.
Hvidsten TR; Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.
de la Torre A; Institute of Life Sciences, Scuola Superiore Sant'Anna, 56127 Pisa, Italy.
Cossu RM; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, 751 24 Uppsala, Sweden.
Hoeppner MP; Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden.
Lantz H; Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432 Ås, Norway.
Scofield DG; Umeå Plant Science Centre, Department of Ecology and Environmental Science, Umeå University 901 87, Umeå, Sweden.
Zamani N; School of Forestry, Northern Arizona University, Flagstaff, AZ 86011.
Johansson A; Institute of Life Sciences, Scuola Superiore Sant'Anna, 56127 Pisa, Italy.
Mannapperuma C; Department of Neuroscience and Brain Technologies, Istituto Italiano di Tecnologia (IIT), 16163 Genova, Italy.
Robinson KM; Department of Medical Biochemistry and Microbiology, Uppsala University, 751 23 Uppsala, Sweden.
Mähler N; Institute of Clinical Molecular Biology, Christian Albrechts University of Kiel, 24105 Kiel, Germany.
Leitch IJ; Department of Medical Biochemistry and Microbiology, Uppsala University, 751 23 Uppsala, Sweden.
Pellicer J; National Bioinformatics Infrastructure Sweden, Uppsala University, 751 23 Uppsala, Sweden.
Park EJ; Umeå Plant Science Centre, Department of Ecology and Environmental Science, Umeå University 901 87, Umeå, Sweden.
Van Montagu M; Department of Ecology and Genetics: Evolutionary Biology, Uppsala University, 751 05 Uppsala, Sweden.
Van de Peer Y; Uppsala Multidisciplinary Center for Advanced Computational Science, Uppsala University, 751 05 Uppsala, Sweden.
Grabherr M; Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.
Jansson S; Department of Medical Biochemistry and Microbiology, Uppsala University, 751 23 Uppsala, Sweden.
Ingvarsson PK; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, 751 24 Uppsala, Sweden.
Street NR; Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden.

Proc Natl Acad Sci U S A ; 115(46): E10970-E10978, 2018 11 13.

Article en En | MEDLINE | ID: mdl-30373829

Asunto(s)

Populus/genética; Evolución Biológica; ADN de Plantas/genética; Evolución Molecular; Variación Genética; Genética de Población/métodos; Genoma de Planta; Genómica; Desequilibrio de Ligamiento/genética; Filogenia; Selección Genética/genética; Análisis de Secuencia de ADN/métodos; Árboles/genética

Palabras clave

Populus; coexpression; genome assembly; natural selection; population genetics

Texto completo

Imprimir

XML

PubMed Links

Buscar en Google