Highly Contiguous Genome Resource of Colletotrichum fructicola Generated Using Long-Read Sequencing.
Mol Plant Microbe Interact
; 33(6): 790-793, 2020 Jun.
Article
en En
| MEDLINE
| ID: mdl-32163336
ABSTRACT
Colletotrichum fructicola is a plant-pathogenic fungus with a broad host range. It causes significant losses to important crops, including apple, pear, strawberry, and other Rosaceae and non-Rosaceae species. To date, two short read-based C. fructicola genomes are publicly available, but both are fragmented. In this study, we re-sequenced the genome of C. fructicola using nanopore long-read technology and refined the assembly with Hi-C map data. The resulting high-quality assembly is an important resource for further comparative and experimental studies with C. fructicola.
Palabras clave
Texto completo:
1
Banco de datos:
MEDLINE
Asunto principal:
Enfermedades de las Plantas
/
Genoma Fúngico
/
Colletotrichum
/
Rosaceae
Idioma:
En
Año:
2020
Tipo del documento:
Article