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1.
Plant Physiol Biochem ; 206: 108294, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38159547

ABSTRACT

Plant rhamnogalacturonan lyases (RGLyases) cleave the backbone of rhamnogalacturonan I (RGI), the "hairy" pectin and polymer of the disaccharide rhamnose (Rha)-galacturonic acid (GalA) with arabinan, galactan or arabinogalactan side chains. It has been suggested that RGLyases could participate in remodeling cell walls during fruit softening, but clear evidence has not been reported. To investigate the role of RGLyases in strawberry softening, a genome-wide analysis of RGLyase genes in the genus Fragaria was performed. Seventeen genes encoding RGLyases with functional domains were identified in Fragaria × ananassa. FaRGLyase1 was the most expressed in the ripe receptacle of cv. Chandler. Transgenic strawberry plants expressing an RNAi sequence of FaRGLyase1 were obtained. Three transgenic lines yielded ripe fruits firmer than controls without other fruit quality parameters being significantly affected. The highest increase in firmness achieved was close to 32%. Cell walls were isolated from ripe fruits of two selected lines. The amount of water-soluble and chelated pectins was higher in transgenic lines than in the control. A carbohydrate microarray study showed a higher abundance of RGI epitopes in pectin fractions and in the cellulose-enriched fraction obtained from transgenic lines. Sixty-seven genes were differentially expressed in transgenic ripe fruits when compared with controls. These genes were involved in various physiological processes, including cell wall remodeling, ion homeostasis, lipid metabolism, protein degradation, stress response, and defense. The transcriptomic changes observed in FaRGLyase1 plants suggest that senescence was delayed in transgenic fruits.


Subject(s)
Fragaria , Fragaria/metabolism , Fruit/genetics , Fruit/metabolism , Rhamnogalacturonans/metabolism , Pectins/metabolism , Plants, Genetically Modified/metabolism , Polysaccharide-Lyases/genetics , Polysaccharide-Lyases/metabolism , Cell Wall/metabolism , Gene Expression Regulation, Plant
2.
J Exp Bot ; 71(22): 7103-7117, 2020 12 31.
Article in English | MEDLINE | ID: mdl-32856699

ABSTRACT

To disentangle the role of polygalacturonase (PG) genes in strawberry softening, the two PG genes most expressed in ripe receptacles, FaPG1 and FaPG2, were down-regulated. Transgenic ripe fruits were firmer than those of the wild type when PG genes were silenced individually. Simultaneous silencing of both PG genes by transgene stacking did not result in an additional increase in firmness. Cell walls from ripe fruits were characterized by a carbohydrate microarray. Higher signals of homogalacturonan and rhamnogalacturonan I pectin epitopes in polysaccharide fractions tightly bound to the cell wall were observed in the transgenic genotypes, suggesting a lower pectin solubilization. At the transcriptomic level, the suppression of FaPG1 or FaPG2 alone induced few transcriptomic changes in the ripe receptacle, but the amount of differentially expressed genes increased notably when both genes were silenced. Many genes encoding cell wall-modifying enzymes were down-regulated. The expression of a putative high affinity potassium transporter was induced in all transgenic genotypes, indicating that cell wall weakening and loss of cell turgor could be linked. These results suggest that, besides the disassembly of pectins tightly linked to the cell wall, PGs could play other roles in strawberry softening, such as the release of oligogalacturonides exerting a positive feedback in softening.


Subject(s)
Fragaria , Cell Wall/metabolism , Fragaria/genetics , Fragaria/metabolism , Fruit/genetics , Fruit/metabolism , Gene Expression Regulation, Plant , Pectins/metabolism , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Polygalacturonase/genetics , Polygalacturonase/metabolism
3.
Proc Natl Acad Sci U S A ; 117(6): 3281-3290, 2020 02 11.
Article in English | MEDLINE | ID: mdl-31974310

ABSTRACT

There is considerable interest in engineering plant cell wall components, particularly lignin, to improve forage quality and biomass properties for processing to fuels and bioproducts. However, modifying lignin content and/or composition in transgenic plants through down-regulation of lignin biosynthetic enzymes can induce expression of defense response genes in the absence of biotic or abiotic stress. Arabidopsis thaliana lines with altered lignin through down-regulation of hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyl transferase (HCT) or loss of function of cinnamoyl CoA reductase 1 (CCR1) express a suite of pathogenesis-related (PR) protein genes. The plants also exhibit extensive cell wall remodeling associated with induction of multiple cell wall-degrading enzymes, a process which renders the corresponding biomass a substrate for growth of the cellulolytic thermophile Caldicellulosiruptor bescii lacking a functional pectinase gene cluster. The cell wall remodeling also results in the release of size- and charge-heterogeneous pectic oligosaccharide elicitors of PR gene expression. Genetic analysis shows that both in planta PR gene expression and release of elicitors are the result of ectopic expression in xylem of the gene ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 1 (ADPG1), which is normally expressed during anther and silique dehiscence. These data highlight the importance of pectin in cell wall integrity and the value of lignin modification as a tool to interrogate the informational content of plant cell walls.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/physiology , Lignin/metabolism , Plant Stems/metabolism , Polygalacturonase/metabolism , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Cell Wall/genetics , Cell Wall/metabolism , Pectins/metabolism , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Plants, Genetically Modified/physiology , Polygalacturonase/genetics
4.
Plant Physiol ; 179(2): 544-557, 2019 02.
Article in English | MEDLINE | ID: mdl-30459263

ABSTRACT

Tomato (Solanum lycopersicum) is a globally important crop with an economic value in the tens of billions of dollars, and a significant supplier of essential vitamins, minerals, and phytochemicals in the human diet. Shelf life is a key quality trait related to alterations in cuticle properties and remodeling of the fruit cell walls. Studies with transgenic tomato plants undertaken over the last 20 years have indicated that a range of pectin-degrading enzymes are involved in cell wall remodeling. These studies usually involved silencing of only a single gene and it has proved difficult to compare the effects of silencing these genes across the different experimental systems. Here we report the generation of CRISPR-based mutants in the ripening-related genes encoding the pectin-degrading enzymes pectate lyase (PL), polygalacturonase 2a (PG2a), and ß-galactanase (TBG4). Comparison of the physiochemical properties of the fruits from a range of PL, PG2a, and TBG4 CRISPR lines demonstrated that only mutations in PL resulted in firmer fruits, although mutations in PG2a and TBG4 influenced fruit color and weight. Pectin localization, distribution, and solubility in the pericarp cells of the CRISPR mutant fruits were investigated using the monoclonal antibody probes LM19 to deesterified homogalacturonan, INRA-RU1 to rhamnogalacturonan I, LM5 to ß-1,4-galactan, and LM6 to arabinan epitopes, respectively. The data indicate that PL, PG2a, and TBG4 act on separate cell wall domains and the importance of cellulose microfibril-associated pectin is reflected in its increased occurrence in the different mutant lines.


Subject(s)
CRISPR-Cas Systems , Enzymes/genetics , Fruit/physiology , Pectins/metabolism , Solanum lycopersicum/physiology , Cell Wall/chemistry , Cell Wall/metabolism , Enzymes/metabolism , Esterification , Galactans/genetics , Galactans/metabolism , Gene Expression Regulation, Plant , Gene Silencing , Solanum lycopersicum/genetics , Mutation , Pectins/genetics , Pectins/immunology , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified
5.
Physiol Plant ; 164(1): 95-105, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29688577

ABSTRACT

Antibody-based approaches have been used to study cell wall architecture and modifications during the ripening process of two important fleshy fruit crops: tomato and strawberry. Cell wall polymers in both unripe and ripe fruits have been sequentially solubilized and fractions analyzed with sets of monoclonal antibodies focusing on the pectic polysaccharides. We demonstrate the specific detection of the LM26 branched galactan epitope, associated with rhamnogalacturonan-I, in cell walls of ripe strawberry fruit. Analytical approaches confirm that the LM26 epitope is linked to sets of rhamnogalacturonan-I and homogalacturonan molecules. The cellulase-degradation of cellulose-rich residues that releases cell wall polymers intimately linked with cellulose microfibrils has been used to explore aspects of branched galactan occurrence and galactan metabolism. In situ analyses of ripe strawberry fruits indicate that the LM26 epitope is present in all primary cell walls and also particularly abundant in vascular tissues. The significance of the occurrence of branched galactan structures in the side chains of rhamnogalacturonan-I pectins in the context of ripening strawberry fruit is discussed.


Subject(s)
Epitopes/chemistry , Fragaria/metabolism , Fruit/metabolism , Galactans/metabolism , Solanum lycopersicum/metabolism , Cellulose/metabolism , Fragaria/genetics , Fruit/genetics , Galactans/genetics , Solanum lycopersicum/genetics , Pectins/metabolism
6.
Food Chem ; 246: 275-285, 2018 Apr 25.
Article in English | MEDLINE | ID: mdl-29291850

ABSTRACT

The matrix polysaccharides of plant cell walls are diverse and variable sets of polymers influencing cell wall, tissue and organ properties. Focusing on the relatively simple parenchyma tissues of four fruits - tomato, aubergine, strawberry and apple - we have dissected cell wall matrix polysaccharide contents using sequential solubilisation and antibody-based approaches with a focus on pectic homogalacturonan (HG) and rhamnogalacturonan-I (RG-I). Epitope detection in association with anion-exchange chromatography analysis indicates that in all cases solubilized polymers include spectra of HG molecules with unesterified regions that are separable from methylesterified HG domains. In highly soluble fractions, RG-I domains exist in both HG-associated and non-HG-associated forms. Soluble xyloglucan and pectin-associated xyloglucan components were detected in all fruits. Aubergine glycans contain abundant heteroxylan epitopes, some of which are associated with both pectin and xyloglucan. These profiles of polysaccharide heterogeneity provide a basis for future studies of more complex cell and tissue systems.


Subject(s)
Cell Wall/chemistry , Fruit/chemistry , Pectins/analysis , Pectins/chemistry , Fragaria , Glucans/analysis , Solanum lycopersicum , Malus , Polysaccharides/chemistry , Solanum melongena , Xylans/analysis
7.
Plant Physiol ; 176(2): 1547-1558, 2018 02.
Article in English | MEDLINE | ID: mdl-29150558

ABSTRACT

A major question in plant biology concerns the specification and functional differentiation of cell types. This is in the context of constraints imposed by networks of cell walls that both adhere cells and contribute to the form and function of developing organs. Here, we report the identification of a glycan epitope that is specific to phloem sieve element cell walls in several systems. A monoclonal antibody, designated LM26, binds to the cell wall of phloem sieve elements in stems of Arabidopsis (Arabidopsis thaliana), Miscanthus x giganteus, and notably sugar beet (Beta vulgaris) roots where phloem identification is an important factor for the study of phloem unloading of Suc. Using microarrays of synthetic oligosaccharides, the LM26 epitope has been identified as a ß-1,6-galactosyl substitution of ß-1,4-galactan requiring more than three backbone residues for optimized recognition. This branched galactan structure has previously been identified in garlic (Allium sativum) bulbs in which the LM26 epitope is widespread throughout most cell walls including those of phloem cells. Garlic bulb cell wall material has been used to confirm the association of the LM26 epitope with cell wall pectic rhamnogalacturonan-I polysaccharides. In the phloem tissues of grass stems, the LM26 epitope has a complementary pattern to that of the LM5 linear ß-1,4-galactan epitope, which is detected only in companion cell walls. Mechanical probing of transverse sections of M x giganteus stems and leaves by atomic force microscopy indicates that phloem sieve element cell walls have a lower indentation modulus (indicative of higher elasticity) than companion cell walls.


Subject(s)
Arabidopsis/metabolism , Beta vulgaris/metabolism , Galactans/metabolism , Poaceae/metabolism , Antibodies, Monoclonal , Arabidopsis/cytology , Beta vulgaris/cytology , Cell Wall/metabolism , Epitopes , Galactans/chemistry , Galactans/immunology , Mechanical Phenomena , Microarray Analysis , Microscopy, Atomic Force , Phloem/cytology , Phloem/metabolism , Plant Leaves/cytology , Plant Leaves/metabolism , Plant Roots/cytology , Plant Roots/metabolism , Plant Stems/cytology , Plant Stems/metabolism , Poaceae/cytology
8.
Carbohydr Res ; 436: 36-40, 2016 Dec 21.
Article in English | MEDLINE | ID: mdl-27855335

ABSTRACT

Plant cell wall glycans are important polymers that are crucial to plant development and serve as an important source of sustainable biomass. The study of polysaccharides in the plant cell wall relies heavily on monoclonal antibodies (mAbs) for localization and visualization of glycans, using e.g. immunofluorescent microscopy. Here, we describe the detailed epitope mapping of the mAb LM5 that is shown to bind to a minimum of three sugar residues at the non-reducing end of linear beta-1,4-linked galactan. The study uses de novo synthetic analogues of galactans combined with carbohydrate microarray and competitive inhibition ELISA for analysis of antibody-carbohydrate interactions.


Subject(s)
Antibodies, Monoclonal/metabolism , Cell Wall/chemistry , Epitopes/chemistry , Galactans/chemistry , Galactose/chemistry , Oligosaccharides/metabolism , Pectins/chemistry , Antibodies, Monoclonal/chemistry , Oligosaccharides/chemistry
9.
Curr Biol ; 26(21): 2899-2906, 2016 11 07.
Article in English | MEDLINE | ID: mdl-27720618

ABSTRACT

Stomatal opening and closure depends on changes in turgor pressure acting within guard cells to alter cell shape [1]. The extent of these shape changes is limited by the mechanical properties of the cells, which will be largely dependent on the structure of the cell walls. Although it has long been observed that guard cells are anisotropic due to differential thickening and the orientation of cellulose microfibrils [2], our understanding of the composition of the cell wall that allows them to undergo repeated swelling and deflation remains surprisingly poor. Here, we show that the walls of guard cells are rich in un-esterified pectins. We identify a pectin methylesterase gene, PME6, which is highly expressed in guard cells and required for stomatal function. pme6-1 mutant guard cells have walls enriched in methyl-esterified pectin and show a decreased dynamic range in response to triggers of stomatal opening/closure, including elevated osmoticum, suggesting that abrogation of stomatal function reflects a mechanical change in the guard cell wall. Altered stomatal function leads to increased conductance and evaporative cooling, as well as decreased plant growth. The growth defect of the pme6-1 mutant is rescued by maintaining the plants in elevated CO2, substantiating gas exchange analyses, indicating that the mutant stomata can bestow an improved assimilation rate. Restoration of PME6 rescues guard cell wall pectin methyl-esterification status, stomatal function, and plant growth. Our results establish a link between gene expression in guard cells and their cell wall properties, with a corresponding effect on stomatal function and plant physiology.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/genetics , Gene Expression Regulation, Plant , Pectins/metabolism , Plant Stomata/metabolism , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Cell Wall/metabolism , Demethylation , Esterification
10.
Plant Cell Physiol ; 56(11): 2181-96, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26384432

ABSTRACT

Rhamnogalacturonan I (RGI) is a pectic polysaccharide composed of a backbone of alternating rhamnose and galacturonic acid residues with side chains containing galactose and/or arabinose residues. The structure of these side chains and the degree of substitution of rhamnose residues are extremely variable and depend on species, organs, cell types and developmental stages. Deciphering RGI function requires extending the current set of monoclonal antibodies (mAbs) directed to this polymer. Here, we describe the generation of a new mAb that recognizes a heterogeneous subdomain of RGI. The mAb, INRA-AGI-1, was produced by immunization of mice with RGI oligosaccharides isolated from potato tubers. These oligomers consisted of highly branched RGI backbones substituted with short side chains. INRA-AGI-1 bound specifically to RGI isolated from galactan-rich cell walls and displayed no binding to other pectic domains. In order to identify its RGI-related epitope, potato RGI oligosaccharides were fractionated by anion-exchange chromatography. Antibody recognition was assessed for each chromatographic fraction. INRA-AGI-1 recognizes a linear chain of (1→4)-linked galactose and (1→5)-linked arabinose residues. By combining the use of INRA-AGI-1 with LM5, LM6 and INRA-RU1 mAbs and enzymatic pre-treatments, evidence is presented of spatial differences in RGI motif distribution within individual cell walls of potato tubers and carrot roots. These observations raise questions about the biosynthesis and assembly of pectin structural domains and their integration and remodeling in cell walls.


Subject(s)
Cell Wall/chemistry , Galactans/immunology , Pectins/chemistry , Animals , Daucus carota/chemistry , Epitopes , Galactans/analysis , Mice , Plant Roots/chemistry , Plant Roots/cytology , Polysaccharides/analysis , Solanum tuberosum/chemistry
11.
Planta ; 242(6): 1321-34, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26208585

ABSTRACT

MAIN CONCLUSION: The derivation of two sensitive monoclonal antibodies directed to heteroxylan cell wall polysaccharide preparations has allowed the identification of potential inter-linkages between xylan and pectin in potato tuber cell walls and also between xylan and arabinogalactan-proteins in oat grain cell walls. Plant cell walls are complex composites of structurally distinct glycans that are poorly understood in terms of both in muro inter-linkages and developmental functions. Monoclonal antibodies (MAbs) are versatile tools that can detect cell wall glycans with high sensitivity through the specific recognition of oligosaccharide structures. The isolation of two novel MAbs, LM27 and LM28, directed to heteroxylan, subsequent to immunisation with a potato cell wall fraction enriched in rhamnogalacturonan-I (RG-I) oligosaccharides, is described. LM27 binds strongly to heteroxylan preparations from grass cell walls and LM28 binds to a glucuronosyl-containing epitope widely present in heteroxylans. Evidence is presented suggesting that in potato tuber cell walls, some glucuronoxylan may be linked to pectic macromolecules. Evidence is also presented that suggests in oat spelt xylan both the LM27 and LM28 epitopes are linked to arabinogalactan-proteins as tracked by the LM2 arabinogalactan-protein epitope. This work extends knowledge of the potential occurrence of inter-glycan links within plant cell walls and describes molecular tools for the further analysis of such links.


Subject(s)
Antibodies, Monoclonal/analysis , Cell Wall/metabolism , Plant Cells/metabolism , Polysaccharides/metabolism , Antibodies, Monoclonal/metabolism , Pectins/metabolism , Xylans/metabolism
12.
BMC Plant Biol ; 15: 56, 2015 Feb 18.
Article in English | MEDLINE | ID: mdl-25848828

ABSTRACT

BACKGROUND: While it is kno3wn that complex tissues with specialized functions emerged during land plant evolution, it is not clear how cell wall polymers and their structural variants are associated with specific tissues or cell types. Moreover, due to the economic importance of many flowering plants, ferns have been largely neglected in cell wall comparative studies. RESULTS: To explore fern cell wall diversity sets of monoclonal antibodies directed to matrix glycans of angiosperm cell walls have been used in glycan microarray and in situ analyses with 76 fern species and four species of lycophytes. All major matrix glycans were present as indicated by epitope detection with some variations in abundance. Pectic HG epitopes were of low abundance in lycophytes and the CCRC-M1 fucosylated xyloglucan epitope was largely absent from the Aspleniaceae. The LM15 XXXG epitope was detected widely across the ferns and specifically associated with phloem cell walls and similarly the LM11 xylan epitope was associated with xylem cell walls. The LM5 galactan and LM6 arabinan epitopes, linked to pectic supramolecules in angiosperms, were associated with vascular structures with only limited detection in ground tissues. Mannan epitopes were found to be associated with the development of mechanical tissues. We provided the first evidence for the presence of MLG in leptosporangiate ferns. CONCLUSIONS: The data sets indicate that cell wall diversity in land plants is multifaceted and that matrix glycan epitopes display complex spatio-temporal and phylogenetic distribution patterns that are likely to relate to the evolution of land plant body plans.


Subject(s)
Antibodies, Monoclonal/metabolism , Cell Wall/metabolism , Ferns/classification , Ferns/metabolism , Organ Specificity , Phylogeny , Polysaccharides/metabolism , Epitopes/metabolism , Ferns/cytology , Fluorescent Antibody Technique, Indirect , Galactans/metabolism , Glucans , Mannans/metabolism , Microarray Analysis , Pectins/metabolism , Phloem/metabolism , Plant Extracts/metabolism , Polysaccharide-Lyases/metabolism , Xylans
13.
PLoS One ; 9(12): e115150, 2014.
Article in English | MEDLINE | ID: mdl-25517975

ABSTRACT

Cotton fibre is mainly composed of cellulose, although non-cellulosic polysaccharides play key roles during fibre development and are still present in the harvested fibre. This study aimed at determining the fate of non-cellulosic polysaccharides during cotton textile processing. We analyzed non-cellulosic cotton fibre polysaccharides during different steps of cotton textile processing using GC-MS, HPLC and comprehensive microarray polymer profiling to obtain monosaccharide and polysaccharide amounts and linkage compositions. Additionally, in situ detection was used to obtain information on polysaccharide localization and accessibility. We show that pectic and hemicellulosic polysaccharide levels decrease during cotton textile processing and that some processing steps have more impact than others. Pectins and arabinose-containing polysaccharides are strongly impacted by the chemical treatments, with most being removed during bleaching and scouring. However, some forms of pectin are more resistant than others. Xylan and xyloglucan are affected in later processing steps and to a lesser extent, whereas callose showed a strong resistance to the chemical processing steps. This study shows that non-cellulosic polysaccharides are differently impacted by the treatments used in cotton textile processing with some hemicelluloses and callose being resistant to these harsh treatments.


Subject(s)
Cotton Fiber/methods , Gossypium/chemistry , Polymers/chemistry , Polysaccharides/metabolism , Textiles , Arabinose/metabolism , Chromatography, High Pressure Liquid , Gas Chromatography-Mass Spectrometry , Glucans/metabolism , Gossypium/growth & development , Gossypium/metabolism , Microscopy, Fluorescence , Pectins/metabolism , Xylans/metabolism
14.
Ann Bot ; 114(6): 1359-73, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25024256

ABSTRACT

BACKGROUND AND AIMS: Parasitic plants obtain nutrients from their hosts through organs called haustoria. The hyaline body is a specialized parenchymatous tissue occupying the central parts of haustoria in many Orobanchaceae species. The structure and functions of hyaline bodies are poorly understood despite their apparent necessity for the proper functioning of haustoria. Reported here is a cell wall-focused immunohistochemical study of the hyaline bodies of three species from the ecologically important clade of rhinanthoid Orobanchaceae. METHODS: Haustoria collected from laboratory-grown and field-collected plants of Rhinanthus minor, Odontites vernus and Melampyrum pratense attached to various hosts were immunolabelled for cell wall matrix glycans and glycoproteins using specific monoclonal antibodies (mAbs). KEY RESULTS: Hyaline body cell wall architecture differed from that of the surrounding parenchyma in all species investigated. Enrichment in arabinogalactan protein (AGP) epitopes labelled with mAbs LM2, JIM8, JIM13, JIM14 and CCRC-M7 was prominent and coincided with reduced labelling of de-esterified homogalacturonan with mAbs JIM5, LM18 and LM19. Furthermore, paramural bodies, intercellular deposits and globular ergastic bodies composed of pectins, xyloglucans, extensins and AGPs were common. In Rhinanthus they were particularly abundant in pairings with legume hosts. Hyaline body cells were not in direct contact with haustorial xylem, which was surrounded by a single layer of paratracheal parenchyma with thickened cell walls abutting the xylem. CONCLUSIONS: The distinctive anatomy and cell wall architecture indicate hyaline body specialization. Altered proportions of AGPs and pectins may affect the mechanical properties of hyaline body cell walls. This and the association with a transfer-like type of paratracheal parenchyma suggest a role in nutrient translocation. Organelle-rich protoplasts and the presence of exceptionally profuse intra- and intercellular wall materials when attached to a nitrogen-fixing host suggest subsequent processing and transient storage of nutrients. AGPs might therefore be implicated in nutrient transfer and metabolism in haustoria.


Subject(s)
Cell Wall/chemistry , Mucoproteins/metabolism , Orobanchaceae/cytology , Pectins/metabolism , Antibodies, Monoclonal , Cell Wall/metabolism , Epitopes , Esterification , Glucans/immunology , Glucans/metabolism , Glycoproteins/metabolism , Immunohistochemistry , Mucoproteins/immunology , Orobanchaceae/chemistry , Orobanchaceae/metabolism , Pectins/immunology , Plant Proteins/immunology , Plant Proteins/metabolism , Polysaccharides/immunology , Polysaccharides/metabolism , Xylans/immunology , Xylans/metabolism , Xylem/chemistry , Xylem/cytology , Xylem/metabolism
15.
Plant J ; 78(4): 715-22, 2014 May.
Article in English | MEDLINE | ID: mdl-24621270

ABSTRACT

Plant cell walls are complex, multi-macromolecular assemblies of glycans and other molecules and their compositions and molecular architectures vary extensively. Even though the chemistry of cell-wall glycans is now well understood, it remains a challenge to understand the diversity of glycan configurations and interactions in muro, and how these relate to changes in the biological and mechanical properties of cell walls. Here we describe in detail a method called epitope detection chromatography analysis of cell-wall matrix glycan sub-populations and inter-connections. The method combines chromatographic separations with use of glycan-directed monoclonal antibodies as detection tools. The high discrimination capacity and high sensitivity for the detection of glycan structural features (epitopes) provided by use of established monoclonal antibodies allows the study of oligosaccharide motifs on sets of cell-wall glycans in small amounts of plant materials such as a single organ of Arabidopsis thaliana without the need for extensive purification procedures. We describe the use of epitope detection chromatography to assess the heterogeneity of xyloglucan and pectic rhamnogalacturonan I sub-populations and their modulation in A. thaliana organs.


Subject(s)
Cell Wall/chemistry , Chromatography/methods , Epitopes/analysis , Plants/chemistry , Polysaccharides/analysis , Antibodies, Monoclonal/immunology , Arabidopsis/chemistry , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Epitopes/immunology , Glucans/analysis , Glucans/chemistry , Pectins/analysis , Pectins/chemistry , Pentosyltransferases/genetics , Pentosyltransferases/metabolism , Plant Roots/chemistry , Plant Roots/genetics , Plant Roots/metabolism , Plant Shoots/chemistry , Plant Shoots/genetics , Plant Shoots/metabolism , Polysaccharides/chemistry , Polysaccharides/immunology , Reproducibility of Results , Xylans/analysis , Xylans/chemistry
16.
Plant J ; 75(6): 1018-27, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23789903

ABSTRACT

Plant cell walls are complex configurations of polysaccharides that fulfil a diversity of roles during plant growth and development. They also provide sets of biomaterials that are widely exploited in food, fibre and fuel applications. The pectic polysaccharides, which comprise approximately a third of primary cell walls, form complex supramolecular structures with distinct glycan domains. Rhamnogalacturonan I (RG-I) is a highly structurally heterogeneous branched glycan domain within the pectic supramolecule that contains rhamnogalacturonan, arabinan and galactan as structural elements. Heterogeneous RG-I polymers are implicated in generating the mechanical properties of cell walls during cell development and plant growth, but are poorly understood in architectural, biochemical and functional terms. Using specific monoclonal antibodies to the three major RG-I structural elements (arabinan, galactan and the rhamnogalacturonan backbone) for in situ analyses and chromatographic detection analyses, the relative occurrences of RG-I structures were studied within a single tissue: the tobacco seed endosperm. The analyses indicate that the features of the RG-I polymer display spatial heterogeneity at the level of the tissue and the level of single cell walls, and also heterogeneity at the biochemical level. This work has implications for understanding RG-I glycan complexity in the context of cell-wall architectures and in relation to cell-wall functions in cell and tissue development.


Subject(s)
Cell Wall/chemistry , Endosperm/chemistry , Galactans/chemistry , Nicotiana/chemistry , Pectins/chemistry , Polysaccharides/chemistry , Endosperm/cytology , Epitope Mapping , Nicotiana/cytology
17.
Plant Cell Physiol ; 54(8): 1278-88, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23695504

ABSTRACT

Little is known of the dynamics of plant cell wall matrix polysaccharides in response to the impact of mechanical stress on plant organs. The capacity of the imposition of a mechanical stress (periodic brushing) to reduce the height of the inflorescence stem of Arabidopsis thaliana seedlings has been used to study the role of pectic arabinans in the mechanical properties and stress responsiveness of a plant organ. The arabinan-deficient-1 (arad1) mutation that affects arabinan structures in epidermal cell walls of inflorescence stems is demonstrated to reduce the impact on inflorescence stem heights caused by mechanical stress. The arabinan-deficient-2 (arad2) mutation, that does not have detectable impact on arabinan structures, is also shown to reduce the impact on stem heights caused by mechanical stress. The LM13 linear arabinan epitope is specifically detected in epidermal cell walls of the younger, flexible regions of inflorescence stems and increases in abundance at the base of inflorescence stems in response to an imposed mechanical stress. The strain (percentage deformation) of stem epidermal cells in the double mutant arad1 × arad2 is lower in unbrushed plants than in wild-type plants, but rises to wild-type levels in response to brushing. The study demonstrates the complexity of arabinan structures within plant cell walls and also that their contribution to cell wall mechanical properties is a factor influencing responsiveness to mechanical stress.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/chemistry , Cell Wall/chemistry , Pectins/metabolism , Pentosyltransferases/metabolism , Polysaccharides/metabolism , Antibodies, Monoclonal , Arabidopsis/cytology , Arabidopsis/genetics , Arabidopsis/physiology , Arabidopsis Proteins/genetics , Biomechanical Phenomena , Epitopes , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Inflorescence/chemistry , Inflorescence/cytology , Inflorescence/genetics , Inflorescence/physiology , Mutation , Organ Specificity , Pentosyltransferases/genetics , Plant Epidermis/chemistry , Plant Epidermis/cytology , Plant Epidermis/genetics , Plant Epidermis/physiology , Plant Stems/chemistry , Plant Stems/cytology , Plant Stems/genetics , Plant Stems/physiology , Plants, Genetically Modified , Polysaccharides/immunology , Seedlings/chemistry , Seedlings/cytology , Seedlings/genetics , Seedlings/physiology , Stress, Mechanical
18.
Plant Physiol ; 160(3): 1551-66, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22961130

ABSTRACT

In some species, a crucial role has been demonstrated for the seed endosperm during germination. The endosperm has been shown to integrate environmental cues with hormonal networks that underpin dormancy and seed germination, a process that involves the action of cell wall remodeling enzymes (CWREs). Here, we examine the cell wall architectures of the endosperms of two related Brassicaceae, Arabidopsis (Arabidopsis thaliana) and the close relative Lepidium (Lepidium sativum), and that of the Solanaceous species, tobacco (Nicotiana tabacum). The Brassicaceae species have a similar cell wall architecture that is rich in pectic homogalacturonan, arabinan, and xyloglucan. Distinctive features of the tobacco endosperm that are absent in the Brassicaceae representatives are major tissue asymmetries in cell wall structural components that reflect the future site of radicle emergence and abundant heteromannan. Cell wall architecture of the micropylar endosperm of tobacco seeds has structural components similar to those seen in Arabidopsis and Lepidium endosperms. In situ and biomechanical analyses were used to study changes in endosperms during seed germination and suggest a role for mannan degradation in tobacco. In the case of the Brassicaceae representatives, the structurally homogeneous cell walls of the endosperm can be acted on by spatially regulated CWRE expression. Genetic manipulations of cell wall components present in the Arabidopsis seed endosperm demonstrate the impact of cell wall architectural changes on germination kinetics.


Subject(s)
Brassicaceae/anatomy & histology , Brassicaceae/cytology , Cell Wall/chemistry , Endosperm/anatomy & histology , Endosperm/cytology , Solanaceae/anatomy & histology , Solanaceae/cytology , Arabidopsis/anatomy & histology , Arabidopsis/cytology , Cellulose/metabolism , Endosperm/growth & development , Germination , Lepidium sativum/anatomy & histology , Lepidium sativum/cytology , Mannans/metabolism , Monosaccharides/chemistry , Mutation/genetics , Pectins/metabolism , Nicotiana/anatomy & histology , Nicotiana/cytology
19.
Planta ; 236(1): 115-28, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22270560

ABSTRACT

Glycosyltransferase complexes are known to be involved in plant cell wall biosynthesis, as for example in cellulose. It is not known to what extent such complexes are involved in biosynthesis of pectin as well. To address this question, work was initiated on ARAD1 (ARABINAN DEFICIENT 1) and its close homolog ARAD2 of glycosyltransferase family GT47. Using bimolecular fluorescence complementation, Förster resonance energy transfer and non-reducing gel electrophoresis, we show that ARAD1 and ARAD2 are localized in the same Golgi compartment and form homo-and heterodimeric intermolecular dimers when expressed transiently in Nicotiana benthamiana. Biochemical analysis of arad2 cell wall or fractions hereof showed no difference in the monosaccharide composition, when compared with wild type. The double mutant arad1 arad2 had an arad1 cell wall phenotype and overexpression of ARAD2 did not complement the arad1 phenotype, indicating that ARAD1 and ARAD2 are not redundant enzymes. To investigate the cell wall structure of the mutants in detail, immunohistochemical analyses were carried out on arad1, arad2 and arad1 arad2 using the arabinan-specific monoclonal antibody LM13. In roots, the labeling pattern of arad2 was distinct from both that of wild type, arad1 and arad1 arad2. Likewise, in epidermal cell walls of inflorescence stems, LM13 binding differed between arad2 and WILD TYPE, arad1 or arad1 arad2. Altogether, these data show that ARAD2 is associated with arabinan biosynthesis, not redundant with ARAD1, and that the two glycosyltransferases may function in complexes held together by disulfide bridges.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Arabidopsis/genetics , Cell Wall/chemistry , Pectins/biosynthesis , Pentosyltransferases/metabolism , Plant Growth Regulators/biosynthesis , Polysaccharides/biosynthesis , Amino Acid Sequence , Disulfides/metabolism , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Genes, Plant , Genetic Variation , Genotype , Glycosyltransferases/metabolism , Mutation , Plants, Genetically Modified , Sequence Alignment , Nicotiana/metabolism , Transformation, Genetic
20.
Planta ; 234(3): 487-99, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21533753

ABSTRACT

A range of molecular probes for cell wall polysaccharides has been used to explore the structure and location of water-extracted pectic polysaccharides occurring in fractions isolated from ginseng roots. The LM19 homogalacturonan (HG) epitope was abundant in an HG fraction and analysis of LM19 binding to a rhamnogalacturonan-I (RG-I) rich-fraction indicated that the LM19 epitope is sensitive to acetylation. A specific RG-I epitope (LM16), four arabinogalactan-protein (AGP) epitopes (LM2, LM14, JIM16, MAC207) and an extensin epitope (JIM20) were found to be abundant and co-located in several isolated polysaccharide fractions including an arabinogalactan fraction and two RG-I fractions. Detection of the RG-I, AGP and extensin epitopes identified in isolated polysaccharide fractions in sections of ginseng roots indicated that they were most abundant in secretory cavities found in the cortical regions of ginseng roots. In addition, the immunocytochemical study indicated that polysaccharide epitope masking is a widespread phenomenon in the primary cell walls of ginseng roots.


Subject(s)
Panax/chemistry , Pectins/analysis , Plant Roots/chemistry , Polysaccharides/analysis , Cell Wall/chemistry , Plant Exudates/analysis , Plant Roots/cytology
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