Metabolic-GWAS provides insights into genetic architecture of seed metabolome in buckwheat.

BACKGROUND: Buckwheat (Fagopyrum spp.), belonging to the Polygonaceae family, is an ancient pseudo-cereal with high nutritional and nutraceutical properties. Buckwheat proteins are gluten-free and show balanced amino acid and micronutrient profiles, with higher content of health-promoting bioactive flavonoids that make it a golden crop of the future. Plant metabolome is increasingly gaining importance as a crucial component to understand the connection between plant physiology and environment and as a potential link between the genome and phenome. However, the genetic architecture governing the metabolome and thus, the phenome is not well understood. Here, we aim to obtain a deeper insight into the genetic architecture of seed metabolome in buckwheat by integrating high throughput metabolomics and genotyping-by-sequencing applying an array of bioinformatics tools for data analysis. RESULTS: High throughput metabolomic analysis identified 24 metabolites in seed endosperm of 130 diverse buckwheat genotypes. The genotyping-by-sequencing (GBS) of these genotypes revealed 3,728,028 SNPs. The Genome Association and Prediction Integrated Tool (GAPIT) assisted in the identification of 27 SNPs/QTLs linked to 18 metabolites. Candidate genes were identified near 100 Kb of QTLs, providing insights into several metabolic and biosynthetic pathways. CONCLUSIONS: We established the metabolome inventory of 130 germplasm lines of buckwheat, identified QTLs through marker trait association and positions of potential candidate genes. This will pave the way for future dissection of complex economic traits in buckwheat.

Selenium fertilization alters the chemical composition and antioxidant constituents of tomato (Solanum lycopersicon L.).

Although selenium (Se) is a known anticarcinogen, little is known regarding how Se affects other nutritional qualities in crops. Tomato ( Solanum lycopersicon ) was supplied with 0-50 µM selenate and analyzed for elemental composition and antioxidant compounds. When supplied at low doses (5 and 10 µM) via the roots, Se stimulated the synthesis of phenolic compounds in leaves and reduced the levels of Mo, Fe, Mn, and Cu in roots. At higher doses (25 and 50 µM Se) leaf glutathione levels were 3-5-fold enhanced. Supply of selenate via foliar spray (0, 2, or 20 mg Se plant(-1)) resulted in Se-biofortified tomato fruits, with Se levels low enough not to pose a health risk. The Se-biofortified fruits showed enhanced levels of the antioxidant flavonoids naringenin chalcone and kaempferol and a concomitant decrease of cinnamic acid derivatives. Thus, tomato fruits can be safely enriched with Se, and Se biofortification may enhance levels of other neutraceutical compounds.

Plasma bilirubin correlations in non-obstructive cholestasis after partial hepatectomy.

BACKGROUND: The aim of this study was to provide an improved outline of the patterns and correlates of changes in plasma bilirubin after partial hepatectomy. METHODS: A large series of blood measurements and complementary variables were prospectively collected from 85 patients undergoing liver resection, and bilirubin correlations were assessed by regression analysis. RESULTS: Early postoperatively, the best simultaneous correlates of increasing bilirubin were the preoperative value, the duration of surgery, and the number of blood transfusions (r2 = 0.74, p < 0.001). Subsequently, increasing bilirubin became related to the number of resected liver segments, the duration of intraoperative liver ischemia, the use of continuous vs. intermittent ischemia, and the presence of sepsis (r2 = 0.82, p < 0.001); these were also the best simultaneous correlates of peak bilirubin. This pattern was characterized by prominently conjugated hyperbilirubinemia, hypocholesterolemia, and moderately increased alkaline phosphatase, and occurred in the absence of obstructive cholestasis. CONCLUSIONS: Major hepatectomy, parenchymal ischemia, and sepsis have similar and synergistic impacts as determinants of prominently conjugated hyperbilirubinemia after liver resection. This is likely related to impaired hepatocellular bilirubin transport and occurs in the absence of obstructive components.