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1.
PLoS Genet ; 17(1): e1009210, 2021 01.
Article in English | MEDLINE | ID: mdl-33428619

ABSTRACT

Modern day Saudi Arabia occupies the majority of historical Arabia, which may have contributed to ancient waves of migration out of Africa. This ancient history has left a lasting imprint in the genetics of the region, including the diverse set of tribes that call Saudi Arabia their home. How these tribes relate to each other and to the world's major populations remains an unanswered question. In an attempt to improve our understanding of the population structure of Saudi Arabia, we conducted genomic profiling of 957 unrelated individuals who self-identify with 28 large tribes in Saudi Arabia. Consistent with the tradition of intra-tribal unions, the subjects showed strong clustering along tribal lines with the distance between clusters correlating with their geographical proximities in Arabia. However, these individuals form a unique cluster when compared to the world's major populations. The ancient origin of these tribal affiliations is supported by analyses that revealed little evidence of ancestral origin from within the 28 tribes. Our results disclose a granular map of population structure and have important implications for future genetic studies into Mendelian and common diseases in the region.


Subject(s)
Arabs/genetics , Genome, Human/genetics , Population Groups/genetics , Africa/epidemiology , Arabia/epidemiology , Arabs/history , Asia/epidemiology , Europe/epidemiology , Female , HapMap Project , Haplotypes/genetics , History, Ancient , Humans , Inbreeding , Male , Population Groups/history , Principal Component Analysis , Saudi Arabia/epidemiology
2.
Plant Cell Physiol ; 56(5): 852-62, 2015 May.
Article in English | MEDLINE | ID: mdl-25619824

ABSTRACT

Boron (B) is an essential micronutrient for plants but is toxic when accumulated in excess. The plant BOR family encodes plasma membrane-localized borate exporters (BORs) that control translocation and homeostasis of B under a wide range of conditions. In this study, we examined the evolutionary divergence of BORs among terrestrial plants and showed that the lycophyte Selaginella moellendorffii and angiosperms have evolved two types of BOR (clades I and II). Clade I includes AtBOR1 and homologs previously shown to be involved in efficient transport of B under conditions of limited B availability. AtBOR1 shows polar localization in the plasma membrane and high-B-induced vacuolar sorting, important features for efficient B transport under low-B conditions, and rapid down-regulation to avoid B toxicity. Clade II includes AtBOR4 and barley Bot1 involved in B exclusion for high-B tolerance. We showed, using yeast complementation and B transport assays, that three genes in S. moellendorffii, SmBOR1 in clade I and SmBOR3 and SmBOR4 in clade II, encode functional BORs. Furthermore, amino acid sequence alignments identified an acidic di-leucine motif unique in clade I BORs. Mutational analysis of AtBOR1 revealed that the acidic di-leucine motif is required for the polarity and high-B-induced vacuolar sorting of AtBOR1. Our data clearly indicated that the common ancestor of vascular plants had already acquired two types of BOR for low- and high-B tolerance, and that the BOR family evolved to establish B tolerance in each lineage by adapting to their environments.


Subject(s)
Amino Acids/metabolism , Antiporters/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Borates/metabolism , Boron/metabolism , Cell Polarity , Evolution, Molecular , Vacuoles/metabolism , Amino Acid Motifs , Amino Acid Sequence , Arabidopsis/drug effects , Biological Transport , Bryopsida/metabolism , Cloning, Molecular , Conserved Sequence , DNA, Complementary/genetics , Molecular Sequence Data , Mutation/genetics , Phylogeny , Selaginellaceae/metabolism , Sequence Alignment
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